Wall clock time and date at job start Thu Mar 4 2021 17:20:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34222 * 117.00377 * 2 1 4 4 O 1.20831 * 119.99962 * 359.97438 * 3 2 1 5 5 C 1.50695 * 120.00202 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.85204 * 24.44466 * 5 3 2 7 7 C 1.34777 * 119.99748 * 65.89334 * 6 5 3 8 8 O 1.21507 * 120.00382 * 5.01149 * 7 6 5 9 9 O 1.34644 * 119.99696 * 185.01579 * 7 6 5 10 10 C 1.45203 * 116.99886 * 179.97438 * 9 7 6 11 11 C 1.53001 * 109.47014 * 59.99871 * 10 9 7 12 12 C 1.52998 * 109.47093 * 180.02562 * 10 9 7 13 13 C 1.53001 * 109.46966 * 300.00128 * 10 9 7 14 14 C 1.53960 * 113.74189 * 253.23763 * 5 3 2 15 15 C 1.53786 * 87.02116 * 220.05464 * 14 5 3 16 16 H 1.08993 * 113.61373 * 270.77522 * 15 14 5 17 17 N 1.46497 * 113.61325 * 139.94999 * 15 14 5 18 18 C 1.34775 * 119.99579 * 105.86785 * 17 15 14 19 19 O 1.21577 * 120.00403 * 359.97438 * 18 17 15 20 20 C 1.47714 * 119.99961 * 180.02562 * 18 17 15 21 21 N 1.31812 * 126.51571 * 0.02562 * 20 18 17 22 22 N 1.28468 * 110.07285 * 179.97438 * 21 20 18 23 23 C 1.46500 * 124.88528 * 179.97438 * 22 21 20 24 24 C 1.35035 * 110.23016 * 0.23336 * 22 21 20 25 25 C 1.50700 * 126.38623 * 179.77262 * 24 22 21 26 26 O 1.42895 * 109.47065 * 29.99543 * 25 24 22 27 27 Si 1.86297 * 109.47348 * 149.99876 * 25 24 22 28 28 C 1.35368 * 107.22981 * 359.62400 * 24 22 21 29 29 C 1.53780 * 113.61808 * 155.64261 * 5 3 2 30 30 H 1.09004 * 109.46854 * 59.99878 * 1 2 3 31 31 H 1.09000 * 109.47183 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.47307 * 300.00110 * 1 2 3 33 33 H 0.96999 * 119.99959 * 245.89295 * 6 5 3 34 34 H 1.08996 * 109.47172 * 60.00119 * 11 10 9 35 35 H 1.08994 * 109.47126 * 180.02562 * 11 10 9 36 36 H 1.08996 * 109.47167 * 299.99856 * 11 10 9 37 37 H 1.08996 * 109.46846 * 60.00345 * 12 10 9 38 38 H 1.08994 * 109.46984 * 180.02562 * 12 10 9 39 39 H 1.08996 * 109.47011 * 299.99831 * 12 10 9 40 40 H 1.09006 * 109.47509 * 59.99991 * 13 10 9 41 41 H 1.09001 * 109.47348 * 179.97438 * 13 10 9 42 42 H 1.09000 * 109.47349 * 299.99602 * 13 10 9 43 43 H 1.09000 * 113.66347 * 105.52917 * 14 5 3 44 44 H 1.08996 * 113.61529 * 334.57902 * 14 5 3 45 45 H 0.96993 * 119.99917 * 285.86857 * 17 15 14 46 46 H 1.09001 * 109.46892 * 90.02715 * 23 22 21 47 47 H 1.08993 * 109.47179 * 210.02405 * 23 22 21 48 48 H 1.08996 * 109.47003 * 330.02935 * 23 22 21 49 49 H 1.08997 * 109.47001 * 269.99373 * 25 24 22 50 50 H 0.96706 * 114.00145 * 60.00976 * 26 25 24 51 51 H 1.48501 * 109.99997 * 58.67748 * 27 25 24 52 52 H 1.48501 * 110.00404 * 179.97438 * 27 25 24 53 53 H 1.07998 * 127.24986 * 180.12481 * 28 24 22 54 54 H 1.09007 * 113.61480 * 25.51264 * 29 5 3 55 55 H 1.09000 * 113.61912 * 254.61546 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2747 -0.0006 6 7 4.1985 0.0773 -0.5597 7 6 4.0359 -0.2243 -1.8632 8 8 3.4422 0.5428 -2.5949 9 8 4.5315 -1.3758 -2.3547 10 6 4.3185 -1.6353 -3.7674 11 6 4.9669 -0.5228 -4.5937 12 6 4.9467 -2.9799 -4.1392 13 6 2.8168 -1.6769 -4.0575 14 6 4.1646 1.7127 1.3487 15 6 5.1655 2.5551 0.5402 16 1 6.0735 2.0155 0.2715 17 7 5.4375 3.8686 1.1293 18 6 6.6108 4.0981 1.7514 19 8 7.4433 3.2151 1.8241 20 6 6.8849 5.4223 2.3458 21 7 6.0788 6.4652 2.3434 22 7 6.6339 7.4529 2.9489 23 6 6.0240 8.7720 3.1341 24 6 7.8627 7.1022 3.3853 25 6 8.8300 7.9817 4.1349 26 8 8.1027 8.9327 4.9151 27 14 9.8819 6.9316 5.2581 28 6 8.0625 5.8122 3.0267 29 6 4.1142 2.5889 -0.5816 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3634 0.5138 0.8900 33 1 4.7341 -0.4985 0.0082 34 1 6.0367 -0.4931 -4.3870 35 1 4.8066 -0.7173 -5.6541 36 1 4.5189 0.4349 -4.3287 37 1 4.4843 -3.7721 -3.5506 38 1 4.7872 -3.1744 -5.1998 39 1 6.0165 -2.9506 -3.9325 40 1 2.3688 -0.7192 -3.7924 41 1 2.6568 -1.8713 -5.1180 42 1 2.3548 -2.4695 -3.4688 43 1 4.6288 0.8992 1.9062 44 1 3.4829 2.3083 1.9559 45 1 4.7731 4.5729 1.0715 46 1 5.4632 8.7850 4.0687 47 1 6.8047 9.5317 3.1683 48 1 5.3502 8.9806 2.3031 49 1 9.4689 8.5067 3.4249 50 1 7.5124 8.5352 5.5698 51 1 10.6191 5.9176 4.4621 52 1 10.8405 7.7871 6.0027 53 1 8.9379 5.2090 3.2166 54 1 3.4186 3.4245 -0.5032 55 1 4.5377 2.4818 -1.5803 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13976896_13259642.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:20:52 Heat of formation + Delta-G solvation = -110.662741 kcal Electronic energy + Delta-G solvation = -40956.867466 eV Core-core repulsion = 35578.493221 eV Total energy + Delta-G solvation = -5378.374245 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.198 amu Computer time = 2.04 seconds Orbital eigenvalues (eV) -43.85566 -42.74412 -41.54620 -40.82828 -39.63654 -38.05677 -37.99965 -37.49659 -35.71660 -35.02034 -34.41345 -33.40168 -32.50434 -29.45581 -28.62384 -28.38204 -28.31208 -27.28974 -27.09910 -26.51409 -24.47931 -24.03290 -22.47726 -22.17022 -21.25259 -21.12495 -20.57580 -19.41748 -19.27119 -19.05505 -18.24283 -17.64416 -17.60045 -17.51585 -17.43946 -17.12435 -17.02419 -16.77967 -16.55436 -16.03352 -15.78490 -15.67532 -15.53399 -15.40917 -15.17795 -15.01778 -14.84663 -14.56056 -14.46077 -14.02014 -13.85229 -13.73530 -13.66325 -13.51913 -13.43644 -13.34310 -13.16647 -13.11110 -12.93305 -12.88170 -12.64584 -12.60128 -12.55015 -12.37342 -12.34648 -12.20199 -11.92370 -11.84913 -11.80095 -11.42799 -11.38459 -11.15557 -10.92035 -10.53959 -10.35529 -10.07617 -9.97415 -4.95787 0.41080 0.75759 0.80564 0.98099 1.19846 1.36925 1.55585 1.70514 1.75133 1.98666 2.10516 2.23843 2.85845 2.94013 3.04311 3.18773 3.31359 3.35113 3.40824 3.57675 3.72002 3.78113 3.91679 3.93199 4.04098 4.17510 4.22012 4.28485 4.30601 4.36711 4.41540 4.43337 4.46629 4.51795 4.56250 4.59901 4.60110 4.61934 4.69551 4.73041 4.74842 4.75867 4.77537 4.84807 4.86983 4.98692 5.15746 5.18531 5.19923 5.25951 5.30291 5.33212 5.49794 5.67072 6.20591 6.30224 6.48676 6.57588 6.79864 7.04254 7.20405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.520 6.520 5 C 0.176 3.824 6 N -0.675 5.675 7 C 0.654 3.346 8 O -0.581 6.581 9 O -0.362 6.362 10 C 0.129 3.871 11 C -0.181 4.181 12 C -0.138 4.138 13 C -0.178 4.178 14 C -0.121 4.121 15 C 0.136 3.864 16 H 0.123 0.877 17 N -0.696 5.696 18 C 0.610 3.390 19 O -0.560 6.560 20 C -0.038 4.038 21 N -0.261 5.261 22 N -0.258 5.258 23 C 0.076 3.924 24 C -0.007 4.007 25 C -0.036 4.036 26 O -0.544 6.544 27 Si 0.790 3.210 28 C -0.195 4.195 29 C -0.124 4.124 30 H 0.054 0.946 31 H 0.128 0.872 32 H 0.070 0.930 33 H 0.428 0.572 34 H 0.063 0.937 35 H 0.086 0.914 36 H 0.064 0.936 37 H 0.070 0.930 38 H 0.098 0.902 39 H 0.070 0.930 40 H 0.061 0.939 41 H 0.086 0.914 42 H 0.062 0.938 43 H 0.122 0.878 44 H 0.121 0.879 45 H 0.417 0.583 46 H 0.110 0.890 47 H 0.115 0.885 48 H 0.098 0.902 49 H 0.127 0.873 50 H 0.398 0.602 51 H -0.290 1.290 52 H -0.283 1.283 53 H 0.162 0.838 54 H 0.114 0.886 55 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.125 0.234 4.459 4.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.408 6.408 5 C 0.087 3.913 6 N -0.338 5.338 7 C 0.408 3.592 8 O -0.471 6.471 9 O -0.276 6.276 10 C 0.092 3.908 11 C -0.238 4.238 12 C -0.195 4.195 13 C -0.236 4.236 14 C -0.159 4.159 15 C 0.030 3.970 16 H 0.141 0.859 17 N -0.347 5.347 18 C 0.395 3.605 19 O -0.437 6.437 20 C -0.196 4.196 21 N -0.099 5.099 22 N -0.048 5.048 23 C -0.062 4.062 24 C -0.132 4.132 25 C -0.147 4.147 26 O -0.351 6.351 27 Si 0.694 3.306 28 C -0.223 4.223 29 C -0.163 4.163 30 H 0.073 0.927 31 H 0.146 0.854 32 H 0.089 0.911 33 H 0.268 0.732 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.083 0.917 37 H 0.089 0.911 38 H 0.117 0.883 39 H 0.089 0.911 40 H 0.080 0.920 41 H 0.105 0.895 42 H 0.081 0.919 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.254 0.746 46 H 0.129 0.871 47 H 0.133 0.867 48 H 0.116 0.884 49 H 0.144 0.856 50 H 0.249 0.751 51 H -0.216 1.216 52 H -0.210 1.210 53 H 0.180 0.820 54 H 0.132 0.868 55 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.065 0.828 3.563 3.810 hybrid contribution 0.104 0.175 -0.558 0.594 sum -0.961 1.003 3.005 3.311 Atomic orbital electron populations 1.23539 0.74827 1.05598 1.02512 1.86515 1.24879 1.32734 1.83130 1.23883 0.91766 0.81628 0.71348 1.90676 1.66745 1.37080 1.46334 1.20822 0.83878 0.86699 0.99888 1.44053 1.54989 1.27193 1.07530 1.18159 0.77347 0.80542 0.83102 1.90938 1.46461 1.51555 1.58160 1.86326 1.73754 1.37302 1.30245 1.22381 0.96474 0.97293 0.74613 1.22478 1.00957 0.99193 1.01146 1.21891 1.01570 0.92788 1.03219 1.22457 0.94432 1.03097 1.03580 1.23893 0.97940 1.01334 0.92758 1.22388 0.97816 0.84108 0.92658 0.85939 1.45663 1.17857 1.14991 1.56162 1.17014 0.81601 0.84824 0.77016 1.90795 1.47262 1.45383 1.60220 1.21730 0.95388 0.94305 1.08213 1.73495 1.25160 0.95909 1.15366 1.45714 1.11306 1.11376 1.36359 1.22665 1.00987 0.76967 1.05573 1.22144 0.90053 0.95931 1.05108 1.24822 0.96423 0.95667 0.97823 1.86480 1.61552 1.33990 1.53098 0.93180 0.79155 0.76652 0.81606 1.21626 1.00297 0.95027 1.05380 1.23680 0.97673 0.95008 0.99921 0.92697 0.85431 0.91120 0.73208 0.91821 0.89541 0.91675 0.91080 0.88330 0.91093 0.91993 0.89521 0.91884 0.86004 0.86128 0.74566 0.87130 0.86663 0.88385 0.85616 0.75109 1.21643 1.20986 0.82016 0.86798 0.89428 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 113.37 1.20 1.24 16 2 O -0.36 -2.13 10.23 -51.34 -0.53 -2.65 16 3 C 0.47 3.33 6.59 71.23 0.47 3.80 16 4 O -0.52 -5.99 15.80 21.95 0.35 -5.64 16 5 C 0.18 0.32 1.01 3.44 0.00 0.32 16 6 N -0.67 -0.69 4.92 -551.06 -2.71 -3.40 16 7 C 0.65 4.24 7.56 129.79 0.98 5.22 16 8 O -0.58 -6.62 10.42 19.82 0.21 -6.41 16 9 O -0.36 -1.87 9.94 -55.53 -0.55 -2.42 16 10 C 0.13 0.36 1.13 -10.79 -0.01 0.35 16 11 C -0.18 -0.57 8.37 71.98 0.60 0.03 16 12 C -0.14 0.29 8.85 71.98 0.64 0.93 16 13 C -0.18 -0.60 8.37 71.98 0.60 0.00 16 14 C -0.12 0.34 7.17 31.18 0.22 0.57 16 15 C 0.14 0.03 4.12 45.52 0.19 0.22 16 16 H 0.12 0.22 7.50 -2.39 -0.02 0.20 16 17 N -0.70 -1.26 5.36 -443.03 -2.37 -3.64 16 18 C 0.61 4.41 7.82 86.75 0.68 5.09 16 19 O -0.56 -7.22 16.54 -3.96 -0.07 -7.29 16 20 C -0.04 -0.23 7.13 42.46 0.30 0.07 16 21 N -0.26 -0.92 11.67 -48.17 -0.56 -1.48 16 22 N -0.26 0.18 3.70 -355.94 -1.32 -1.14 16 23 C 0.08 -0.61 10.13 127.77 1.29 0.69 16 24 C -0.01 0.00 6.18 41.40 0.26 0.26 16 25 C -0.04 0.18 2.87 71.24 0.20 0.38 16 26 O -0.54 4.14 10.40 -148.98 -1.55 2.59 16 27 Si 0.79 -3.40 31.36 68.60 2.15 -1.25 16 28 C -0.20 -0.80 9.35 22.41 0.21 -0.59 16 29 C -0.12 -0.28 6.59 31.12 0.21 -0.08 16 30 H 0.05 0.19 8.13 -2.39 -0.02 0.17 16 31 H 0.13 -0.53 8.14 -2.39 -0.02 -0.55 16 32 H 0.07 0.02 8.13 -2.39 -0.02 0.00 16 33 H 0.43 -1.80 8.77 -92.71 -0.81 -2.61 16 34 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 35 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 36 H 0.06 0.53 5.88 -2.39 -0.01 0.52 16 37 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 38 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 39 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 40 H 0.06 0.55 5.88 -2.38 -0.01 0.54 16 41 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 42 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 43 H 0.12 -0.81 8.09 -2.39 -0.02 -0.83 16 44 H 0.12 -0.41 8.10 -2.39 -0.02 -0.43 16 45 H 0.42 -0.18 8.44 -92.71 -0.78 -0.96 16 46 H 0.11 -1.34 8.14 -2.39 -0.02 -1.36 16 47 H 0.12 -1.03 6.75 -2.39 -0.02 -1.05 16 48 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 49 H 0.13 -0.59 7.96 -2.39 -0.02 -0.61 16 50 H 0.40 -5.88 8.70 -74.05 -0.64 -6.52 16 51 H -0.29 -0.71 6.83 99.48 0.68 -0.03 16 52 H -0.28 -0.43 7.11 99.48 0.71 0.28 16 53 H 0.16 0.68 6.83 -2.91 -0.02 0.66 16 54 H 0.11 0.32 7.36 -2.38 -0.02 0.30 16 55 H 0.09 0.46 7.20 -2.39 -0.02 0.44 16 Total: 0.00 -27.39 453.24 -0.16 -27.55 By element: Atomic # 1 Polarization: -12.07 SS G_CDS: -1.26 Total: -13.33 kcal Atomic # 6 Polarization: 10.45 SS G_CDS: 8.04 Total: 18.50 kcal Atomic # 7 Polarization: -2.69 SS G_CDS: -6.96 Total: -9.65 kcal Atomic # 8 Polarization: -19.68 SS G_CDS: -2.14 Total: -21.82 kcal Atomic # 14 Polarization: -3.40 SS G_CDS: 2.15 Total: -1.25 kcal Total: -27.39 -0.16 -27.55 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13976896_13259642.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.111 kcal (2) G-P(sol) polarization free energy of solvation -27.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.500 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.552 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.04 seconds