Wall clock time and date at job start Thu Mar 4 2021 17:17:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 N 1.28466 * 124.88458 * 2 1 4 4 C 1.31815 * 110.07274 * 179.97438 * 3 2 1 5 5 C 1.47706 * 126.51505 * 180.02562 * 4 3 2 6 6 O 1.21571 * 119.99775 * 179.97438 * 5 4 3 7 7 N 1.34772 * 120.00584 * 359.97438 * 5 4 3 8 8 C 1.46501 * 120.00317 * 180.02562 * 7 5 4 9 9 H 1.09002 * 109.47144 * 324.99983 * 8 7 5 10 10 C 1.52999 * 109.47199 * 85.00411 * 8 7 5 11 11 C 1.53001 * 109.47183 * 59.99749 * 10 8 7 12 12 C 1.53003 * 109.46708 * 60.00325 * 11 10 8 13 13 H 1.08991 * 109.47019 * 60.00237 * 12 11 10 14 14 C 1.50704 * 109.46428 * 179.97438 * 12 11 10 15 15 O 1.20822 * 119.99755 * 120.00340 * 14 12 11 16 16 O 1.34232 * 119.99733 * 299.99398 * 14 12 11 17 17 C 1.45204 * 116.99431 * 180.02562 * 16 14 12 18 18 C 1.52999 * 109.47195 * 60.00461 * 17 16 14 19 19 C 1.53001 * 109.46835 * 180.02562 * 17 16 14 20 20 C 1.52993 * 109.47350 * 300.00312 * 17 16 14 21 21 C 1.52998 * 109.47056 * 299.99377 * 12 11 10 22 22 C 1.53001 * 109.46853 * 60.00712 * 21 12 11 23 23 C 1.41496 * 106.96163 * 359.75179 * 4 3 2 24 24 C 1.35034 * 124.88332 * 179.97438 * 2 1 3 25 25 C 1.50697 * 126.38727 * 0.04672 * 24 2 1 26 26 O 1.42905 * 109.46996 * 29.99070 * 25 24 2 27 27 Si 1.86301 * 109.47403 * 149.99333 * 25 24 2 28 28 H 1.09005 * 109.46938 * 270.04443 * 1 2 3 29 29 H 1.08999 * 109.46853 * 30.04187 * 1 2 3 30 30 H 1.08993 * 109.47280 * 150.03933 * 1 2 3 31 31 H 0.97008 * 119.99925 * 0.02562 * 7 5 4 32 32 H 1.08998 * 109.47371 * 180.02562 * 10 8 7 33 33 H 1.09003 * 109.46764 * 300.00179 * 10 8 7 34 34 H 1.09002 * 109.47267 * 300.00195 * 11 10 8 35 35 H 1.09001 * 109.46696 * 180.02562 * 11 10 8 36 36 H 1.09000 * 109.47471 * 59.99561 * 18 17 16 37 37 H 1.08999 * 109.46982 * 179.97438 * 18 17 16 38 38 H 1.09002 * 109.47001 * 299.99819 * 18 17 16 39 39 H 1.09002 * 109.47261 * 60.00244 * 19 17 16 40 40 H 1.08999 * 109.47331 * 180.02562 * 19 17 16 41 41 H 1.09005 * 109.47308 * 299.99837 * 19 17 16 42 42 H 1.09000 * 109.47523 * 60.00327 * 20 17 16 43 43 H 1.08999 * 109.47067 * 180.02562 * 20 17 16 44 44 H 1.09002 * 109.47109 * 299.99977 * 20 17 16 45 45 H 1.09002 * 109.47485 * 300.00477 * 21 12 11 46 46 H 1.09003 * 109.46787 * 180.02562 * 21 12 11 47 47 H 1.08999 * 109.46943 * 180.02562 * 22 21 12 48 48 H 1.09002 * 109.47267 * 59.99631 * 22 21 12 49 49 H 1.08000 * 127.24950 * 180.30358 * 23 4 3 50 50 H 1.09001 * 109.46613 * 269.99481 * 25 24 2 51 51 H 0.96696 * 114.00036 * 60.00342 * 26 25 24 52 52 H 1.48497 * 109.99842 * 179.97438 * 27 25 24 53 53 H 1.48498 * 109.99736 * 301.31722 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7168 0.0006 5 6 4.6273 1.6398 0.0013 6 8 5.7597 1.1976 0.0022 7 7 4.4242 2.9721 0.0009 8 6 5.5680 3.8875 0.0010 9 1 6.3775 3.4575 0.5909 10 6 6.0452 4.1078 -1.4359 11 6 4.9089 4.7115 -2.2637 12 6 4.4901 6.0510 -1.6544 13 1 5.3410 6.7320 -1.6544 14 6 3.3712 6.6459 -2.4703 15 8 2.3016 6.8707 -1.9553 16 8 3.5632 6.9262 -3.7689 17 6 2.4417 7.4981 -4.4925 18 6 2.0367 8.8222 -3.8417 19 6 2.8468 7.7469 -5.9468 20 6 1.2600 6.5272 -4.4517 21 6 4.0128 5.8308 -0.2176 22 6 5.1491 5.2271 0.6103 23 6 3.5272 -0.6971 0.0068 24 6 2.2373 -1.1077 0.0005 25 6 1.7534 -2.5349 0.0001 26 8 0.4958 -2.6113 -0.6742 27 14 2.9950 -3.6115 -0.8774 28 1 -0.3633 0.0008 1.0277 29 1 -0.3633 0.8896 -0.5145 30 1 -0.3633 -0.8903 -0.5132 31 1 3.5206 3.3250 0.0005 32 1 6.8964 4.7885 -1.4358 33 1 6.3435 3.1535 -1.8699 34 1 4.0578 4.0304 -2.2638 35 1 5.2487 4.8680 -3.2875 36 1 2.8786 9.5139 -3.8707 37 1 1.1951 9.2517 -4.3852 38 1 1.7480 8.6445 -2.8057 39 1 3.1351 6.8034 -6.4102 40 1 2.0051 8.1766 -6.4900 41 1 3.6889 8.4385 -5.9762 42 1 0.9712 6.3496 -3.4158 43 1 0.4183 6.9564 -4.9953 44 1 1.5485 5.5839 -4.9154 45 1 3.1618 5.1497 -0.2177 46 1 3.7140 6.7850 0.2163 47 1 4.8090 5.0697 1.6338 48 1 6.0001 5.9082 0.6104 49 1 4.4108 -1.3181 0.0135 50 1 1.6362 -2.8789 1.0278 51 1 0.5253 -2.3198 -1.5957 52 1 2.5297 -5.0216 -0.8840 53 1 3.1875 -3.1331 -2.2700 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14048278_13259642.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:17:47 Heat of formation + Delta-G solvation = -76.302066 kcal Electronic energy + Delta-G solvation = -34865.542765 eV Core-core repulsion = 30319.674946 eV Total energy + Delta-G solvation = -4545.867818 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.203 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -43.85771 -42.14074 -40.99369 -39.17284 -38.26538 -37.87971 -35.30651 -34.73293 -34.34050 -32.70264 -31.87156 -31.21427 -28.52901 -28.45426 -28.36520 -26.80820 -25.61114 -24.36580 -23.76350 -22.49058 -22.24497 -21.25392 -20.63644 -20.11421 -19.27446 -18.28192 -17.70634 -17.60149 -17.56334 -17.35618 -17.11195 -16.57826 -16.41459 -16.07008 -15.79111 -15.76300 -15.53040 -15.16930 -14.98623 -14.90776 -14.78093 -14.65861 -14.13868 -14.01428 -13.71776 -13.57045 -13.49466 -13.44813 -13.34646 -13.21947 -13.08019 -12.98711 -12.92171 -12.64936 -12.50628 -12.30230 -12.25049 -12.19344 -12.00703 -11.86459 -11.57748 -11.43015 -11.35358 -11.25624 -11.02935 -10.87224 -10.30213 -10.00538 -9.97260 -4.89776 0.44048 0.81457 1.16377 1.20600 1.54343 1.65538 1.67452 1.93596 2.15661 2.32070 3.01405 3.32931 3.33174 3.42331 3.57981 3.64580 3.67782 3.73246 3.88749 3.93447 4.03266 4.05407 4.10766 4.27522 4.32392 4.33345 4.40130 4.42040 4.43453 4.48486 4.51215 4.52868 4.62655 4.64611 4.68606 4.70262 4.75249 4.79388 4.80753 4.85761 4.97469 5.04953 5.05375 5.09668 5.15215 5.17676 5.22269 5.25459 5.25977 5.29062 5.49483 5.55460 5.66448 6.22161 6.38424 6.77852 6.80559 7.13224 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.265 5.265 3 N -0.271 5.271 4 C -0.041 4.041 5 C 0.604 3.396 6 O -0.561 6.561 7 N -0.704 5.704 8 C 0.140 3.860 9 H 0.088 0.912 10 C -0.123 4.123 11 C -0.101 4.101 12 C -0.076 4.076 13 H 0.132 0.868 14 C 0.464 3.536 15 O -0.525 6.525 16 O -0.355 6.355 17 C 0.108 3.892 18 C -0.180 4.180 19 C -0.139 4.139 20 C -0.180 4.180 21 C -0.101 4.101 22 C -0.116 4.116 23 C -0.186 4.186 24 C -0.014 4.014 25 C -0.046 4.046 26 O -0.536 6.536 27 Si 0.787 3.213 28 H 0.093 0.907 29 H 0.098 0.902 30 H 0.131 0.869 31 H 0.408 0.592 32 H 0.101 0.899 33 H 0.058 0.942 34 H 0.051 0.949 35 H 0.079 0.921 36 H 0.065 0.935 37 H 0.084 0.916 38 H 0.063 0.937 39 H 0.067 0.933 40 H 0.093 0.907 41 H 0.070 0.930 42 H 0.063 0.937 43 H 0.085 0.915 44 H 0.060 0.940 45 H 0.058 0.942 46 H 0.077 0.923 47 H 0.081 0.919 48 H 0.107 0.893 49 H 0.184 0.816 50 H 0.145 0.855 51 H 0.390 0.610 52 H -0.282 1.282 53 H -0.294 1.294 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.890 0.518 -0.707 1.250 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 N -0.055 5.055 3 N -0.109 5.109 4 C -0.199 4.199 5 C 0.389 3.611 6 O -0.438 6.438 7 N -0.356 5.356 8 C 0.036 3.964 9 H 0.106 0.894 10 C -0.162 4.162 11 C -0.139 4.139 12 C -0.095 4.095 13 H 0.150 0.850 14 C 0.308 3.692 15 O -0.414 6.414 16 O -0.273 6.273 17 C 0.072 3.928 18 C -0.237 4.237 19 C -0.196 4.196 20 C -0.237 4.237 21 C -0.139 4.139 22 C -0.154 4.154 23 C -0.214 4.214 24 C -0.139 4.139 25 C -0.156 4.156 26 O -0.344 6.344 27 Si 0.689 3.311 28 H 0.111 0.889 29 H 0.117 0.883 30 H 0.149 0.851 31 H 0.245 0.755 32 H 0.119 0.881 33 H 0.077 0.923 34 H 0.070 0.930 35 H 0.098 0.902 36 H 0.084 0.916 37 H 0.103 0.897 38 H 0.082 0.918 39 H 0.086 0.914 40 H 0.112 0.888 41 H 0.089 0.911 42 H 0.081 0.919 43 H 0.104 0.896 44 H 0.079 0.921 45 H 0.076 0.924 46 H 0.096 0.904 47 H 0.100 0.900 48 H 0.125 0.875 49 H 0.201 0.799 50 H 0.163 0.837 51 H 0.240 0.760 52 H -0.209 1.209 53 H -0.220 1.220 Dipole moment (debyes) X Y Z Total from point charges -1.328 0.494 -0.681 1.572 hybrid contribution -1.229 0.091 -0.707 1.421 sum -2.557 0.585 -1.388 2.968 Atomic orbital electron populations 1.22866 0.71026 1.07483 1.06067 1.45686 1.08885 1.01946 1.48940 1.73487 1.02971 1.14948 1.19522 1.21929 0.90921 0.94693 1.12368 1.17008 0.86321 0.82149 0.75625 1.90779 1.23474 1.77692 1.51841 1.46012 1.11191 1.04750 1.73608 1.21173 0.88375 0.89693 0.97160 0.89384 1.21895 0.98338 1.01643 0.94275 1.21398 0.98897 0.93583 1.00027 1.21237 0.95672 0.98743 0.93826 0.85026 1.24136 0.89545 0.74405 0.81066 1.90582 1.28231 1.50249 1.72355 1.86561 1.43447 1.73800 1.23480 1.22405 0.84521 0.93119 0.92757 1.22453 1.02920 0.95849 1.02461 1.21879 1.03454 1.03200 0.91054 1.22452 0.98246 0.99418 1.03592 1.21403 0.98268 1.02160 0.92074 1.21820 0.99630 0.94717 0.99231 1.21728 0.97405 0.93460 1.08769 1.22172 0.91022 0.92069 1.08662 1.24906 0.93321 0.92110 1.05218 1.86554 1.29626 1.88170 1.30073 0.93154 0.83816 0.74690 0.79409 0.88859 0.88292 0.85082 0.75503 0.88097 0.92290 0.93026 0.90234 0.91607 0.89672 0.91780 0.91418 0.88790 0.91092 0.91850 0.89618 0.92114 0.92362 0.90406 0.90034 0.87500 0.79909 0.83732 0.76012 1.20901 1.22012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.30 11.00 127.77 1.41 1.11 16 2 N -0.27 -0.53 3.70 -355.92 -1.32 -1.85 16 3 N -0.27 -1.68 11.67 -48.18 -0.56 -2.25 16 4 C -0.04 -0.31 7.13 42.45 0.30 -0.01 16 5 C 0.60 5.25 7.79 86.75 0.68 5.92 16 6 O -0.56 -7.76 16.59 -3.94 -0.07 -7.82 16 7 N -0.70 -2.33 4.23 -445.53 -1.88 -4.22 16 8 C 0.14 -0.04 2.78 44.99 0.13 0.09 16 9 H 0.09 0.18 7.58 -2.39 -0.02 0.16 16 10 C -0.12 0.14 5.60 30.59 0.17 0.31 16 11 C -0.10 0.06 4.98 30.60 0.15 0.21 16 12 C -0.08 0.10 2.63 -11.54 -0.03 0.07 16 13 H 0.13 -0.71 8.14 -2.39 -0.02 -0.73 16 14 C 0.46 2.08 6.57 71.24 0.47 2.55 16 15 O -0.52 -4.74 11.49 21.97 0.25 -4.48 16 16 O -0.36 -1.60 9.79 -51.44 -0.50 -2.10 16 17 C 0.11 0.27 1.13 -10.80 -0.01 0.26 16 18 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 19 C -0.14 0.23 8.85 71.98 0.64 0.87 16 20 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 21 C -0.10 0.18 4.32 30.59 0.13 0.31 16 22 C -0.12 0.53 5.61 30.60 0.17 0.70 16 23 C -0.19 -0.73 9.35 22.41 0.21 -0.52 16 24 C -0.01 -0.01 6.17 41.40 0.26 0.25 16 25 C -0.05 0.19 2.99 71.23 0.21 0.40 16 26 O -0.54 2.30 10.02 -148.98 -1.49 0.80 16 27 Si 0.79 -2.79 31.25 68.60 2.14 -0.65 16 28 H 0.09 -0.55 8.14 -2.38 -0.02 -0.57 16 29 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 30 H 0.13 -1.00 5.00 -2.39 -0.01 -1.01 16 31 H 0.41 0.99 6.59 -92.70 -0.61 0.38 16 32 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 33 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 34 H 0.05 0.15 7.60 -2.39 -0.02 0.13 16 35 H 0.08 -0.04 8.11 -2.39 -0.02 -0.06 16 36 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 37 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 38 H 0.06 0.43 5.89 -2.39 -0.01 0.41 16 39 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 40 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 41 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 42 H 0.06 0.47 5.89 -2.39 -0.01 0.46 16 43 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 44 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 45 H 0.06 0.06 6.46 -2.39 -0.02 0.05 16 46 H 0.08 -0.08 8.10 -2.39 -0.02 -0.10 16 47 H 0.08 -0.36 8.14 -2.39 -0.02 -0.37 16 48 H 0.11 -0.88 8.14 -2.39 -0.02 -0.89 16 49 H 0.18 0.04 7.04 -2.91 -0.02 0.02 16 50 H 0.15 -0.98 7.96 -2.39 -0.02 -1.00 16 51 H 0.39 -3.47 8.39 -74.06 -0.62 -4.09 16 52 H -0.28 -0.59 7.11 99.48 0.71 0.12 16 53 H -0.29 -0.84 7.11 99.48 0.71 -0.14 16 Total: 0.00 -21.00 415.20 2.39 -18.60 By element: Atomic # 1 Polarization: -8.54 SS G_CDS: -0.26 Total: -8.80 kcal Atomic # 6 Polarization: 6.68 SS G_CDS: 6.08 Total: 12.77 kcal Atomic # 7 Polarization: -4.55 SS G_CDS: -3.76 Total: -8.31 kcal Atomic # 8 Polarization: -11.79 SS G_CDS: -1.81 Total: -13.60 kcal Atomic # 14 Polarization: -2.79 SS G_CDS: 2.14 Total: -0.65 kcal Total: -21.00 2.39 -18.60 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14048278_13259642.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.700 kcal (2) G-P(sol) polarization free energy of solvation -20.995 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.696 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.602 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.302 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds