Wall clock time and date at job start Thu Mar 4 2021 12:36:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28474 * 124.88089 * 2 1 4 4 C 1.31807 * 110.06642 * 180.20544 * 3 2 1 5 5 C 1.47714 * 126.51431 * 179.86084 * 4 3 2 6 6 O 1.21573 * 119.99890 * 179.68681 * 5 4 3 7 7 N 1.34780 * 120.00039 * 359.68701 * 5 4 3 8 8 C 1.47575 * 134.49095 * 180.02562 * 7 5 4 9 9 C 1.53944 * 86.11685 * 155.35602 * 8 7 5 10 10 C 1.53006 * 113.74015 * 137.94946 * 9 8 7 11 11 O 1.42906 * 109.46752 * 176.92354 * 10 9 8 12 12 Si 1.63101 * 113.99758 * 179.97438 * 11 10 9 13 13 C 1.86296 * 109.47095 * 300.00273 * 12 11 10 14 14 C 1.86305 * 109.46977 * 60.00191 * 12 11 10 15 15 C 1.86295 * 109.47026 * 180.02562 * 12 11 10 16 16 C 1.52999 * 109.47276 * 60.00238 * 15 12 11 17 17 C 1.52999 * 109.47059 * 179.97438 * 15 12 11 18 18 C 1.52998 * 109.47052 * 300.00225 * 15 12 11 19 19 C 1.47807 * 134.45765 * 359.86452 * 7 5 4 20 20 C 1.41501 * 106.97002 * 359.59859 * 4 3 2 21 21 C 1.35030 * 124.88559 * 179.76265 * 2 1 3 22 22 C 1.50696 * 126.38601 * 359.93464 * 21 2 1 23 23 O 1.42902 * 109.47339 * 330.00529 * 22 21 2 24 24 Si 1.86294 * 109.47326 * 210.00294 * 22 21 2 25 25 H 1.48504 * 109.47198 * 60.00379 * 24 22 21 26 26 H 1.48500 * 109.47289 * 180.02562 * 24 22 21 27 27 H 1.48499 * 109.47462 * 300.00399 * 24 22 21 28 28 H 1.08997 * 109.46790 * 270.24472 * 1 2 3 29 29 H 1.09001 * 109.47113 * 30.24207 * 1 2 3 30 30 H 1.08998 * 109.47499 * 150.24067 * 1 2 3 31 31 H 1.08998 * 113.77358 * 41.05283 * 8 7 5 32 32 H 1.09005 * 113.77215 * 269.65714 * 8 7 5 33 33 H 1.08998 * 113.74177 * 269.15242 * 9 8 7 34 34 H 1.08993 * 109.46955 * 296.92772 * 10 9 8 35 35 H 1.09000 * 109.47050 * 56.92601 * 10 9 8 36 36 H 1.09000 * 109.47532 * 60.00241 * 13 12 11 37 37 H 1.09005 * 109.47331 * 180.02562 * 13 12 11 38 38 H 1.08994 * 109.47376 * 299.99795 * 13 12 11 39 39 H 1.09000 * 109.46856 * 60.00325 * 14 12 11 40 40 H 1.08995 * 109.46777 * 180.02562 * 14 12 11 41 41 H 1.09002 * 109.47004 * 299.99982 * 14 12 11 42 42 H 1.08995 * 109.47215 * 59.99835 * 16 15 12 43 43 H 1.09000 * 109.47305 * 180.02562 * 16 15 12 44 44 H 1.09005 * 109.47172 * 299.99938 * 16 15 12 45 45 H 1.09006 * 109.47090 * 60.00503 * 17 15 12 46 46 H 1.09002 * 109.47272 * 179.97438 * 17 15 12 47 47 H 1.08995 * 109.47241 * 300.00049 * 17 15 12 48 48 H 1.08995 * 109.47605 * 59.99885 * 18 15 12 49 49 H 1.09002 * 109.47061 * 180.02562 * 18 15 12 50 50 H 1.08998 * 109.47026 * 299.99636 * 18 15 12 51 51 H 1.09007 * 113.76575 * 90.37976 * 19 7 5 52 52 H 1.09002 * 113.83883 * 318.92035 * 19 7 5 53 53 H 1.08002 * 127.25168 * 180.26274 * 20 4 3 54 54 H 1.09003 * 109.46770 * 90.00142 * 22 21 2 55 55 H 0.96696 * 114.00392 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7169 -0.0044 5 6 4.6272 1.6399 -0.0088 6 8 5.7597 1.1977 -0.0070 7 7 4.4240 2.9723 -0.0149 8 6 5.3088 4.1534 -0.0209 9 6 4.1286 4.9039 -0.6641 10 6 3.9147 6.3114 -0.1034 11 8 2.8485 6.9486 -0.8102 12 14 2.5252 8.4631 -0.2983 13 6 2.0442 8.4209 1.5010 14 6 4.0395 9.5272 -0.5115 15 6 1.1222 9.1706 -1.2991 16 6 -0.1212 8.2966 -1.1234 17 6 0.8185 10.5910 -0.8184 18 6 1.5167 9.2051 -2.7770 19 6 3.2250 3.8366 -0.0211 20 6 3.5272 -0.6971 0.0020 21 6 2.2373 -1.1076 0.0046 22 6 1.7534 -2.5348 0.0119 23 8 0.4961 -2.6081 0.6870 24 14 2.9953 -3.6071 0.8941 25 1 3.1555 -3.1317 2.2919 26 1 2.5188 -5.0136 0.9008 27 1 4.3020 -3.5310 0.1927 28 1 -0.3633 0.0044 1.0276 29 1 -0.3633 0.8878 -0.5176 30 1 -0.3634 -0.8921 -0.5101 31 1 6.1739 4.0510 -0.6760 32 1 5.5680 4.5132 0.9749 33 1 4.1327 4.8766 -1.7537 34 1 3.6615 6.2464 0.9547 35 1 4.8287 6.8930 -0.2233 36 1 2.8648 8.0068 2.0870 37 1 1.8277 9.4330 1.8431 38 1 1.1583 7.7984 1.6259 39 1 4.3208 9.5519 -1.5643 40 1 3.8235 10.5392 -0.1690 41 1 4.8601 9.1131 0.0743 42 1 -0.4022 8.2720 -0.0706 43 1 -0.9419 8.7103 -1.7093 44 1 0.0949 7.2844 -1.4655 45 1 1.7042 11.2141 -0.9433 46 1 -0.0021 11.0052 -1.4043 47 1 0.5373 10.5660 0.2343 48 1 1.7328 8.1930 -3.1191 49 1 0.6960 9.6195 -3.3625 50 1 2.4024 9.8278 -2.9021 51 1 2.8703 4.1030 0.9746 52 1 2.4296 3.4818 -0.6765 53 1 4.4109 -1.3180 0.0047 54 1 1.6359 -2.8838 -1.0141 55 1 0.1238 -3.4995 0.7294 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14186584_13259642.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:36:25 Heat of formation + Delta-G solvation = -46.292084 kcal Electronic energy + Delta-G solvation = -32101.700227 eV Core-core repulsion = 27879.372969 eV Total energy + Delta-G solvation = -4222.327258 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 369.204 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -43.83653 -41.26658 -39.13699 -37.90658 -37.36867 -36.78043 -34.44259 -32.92873 -31.57864 -29.34300 -29.00780 -28.62251 -27.80216 -27.33552 -27.26318 -26.97666 -26.28702 -23.76154 -22.11799 -21.28534 -20.37071 -19.85238 -18.50267 -18.28124 -17.80128 -17.60563 -17.50685 -17.04764 -16.77247 -16.15798 -15.93996 -15.84668 -15.30026 -15.27468 -15.02868 -14.81524 -14.72705 -14.34960 -14.29131 -14.05088 -13.84597 -13.66136 -13.57872 -13.51225 -13.40430 -13.32458 -13.22835 -13.10509 -12.98839 -12.90834 -12.89005 -12.45608 -12.40685 -12.35140 -12.06069 -12.05635 -11.77203 -11.66883 -11.65510 -11.49192 -11.29340 -10.99796 -10.87374 -10.24155 -10.23636 -10.00663 -9.87190 -9.75354 0.40852 0.72769 1.17129 1.41995 1.50235 1.53530 1.59408 1.80877 1.85959 1.98670 2.18926 2.23888 2.53117 3.02912 3.13985 3.36238 3.57103 3.76117 3.96552 4.01476 4.16820 4.16970 4.33708 4.34052 4.35973 4.40652 4.44905 4.49029 4.50089 4.53072 4.59161 4.61616 4.64774 4.75354 4.78404 4.80458 4.81349 4.84899 4.85212 4.85258 4.86799 4.87656 5.04433 5.13236 5.13740 5.21321 5.24372 5.27569 5.38766 5.45696 5.48918 5.59753 5.65947 5.69553 5.70342 6.48862 6.69231 6.75425 7.02685 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.087 3.913 2 N -0.260 5.260 3 N -0.257 5.257 4 C -0.036 4.036 5 C 0.618 3.382 6 O -0.577 6.577 7 N -0.640 5.640 8 C 0.109 3.891 9 C -0.109 4.109 10 C 0.087 3.913 11 O -0.635 6.635 12 Si 1.323 2.677 13 C -0.519 4.519 14 C -0.521 4.521 15 C -0.385 4.385 16 C -0.136 4.136 17 C -0.141 4.141 18 C -0.137 4.137 19 C 0.118 3.882 20 C -0.211 4.211 21 C 0.031 3.969 22 C -0.044 4.044 23 O -0.557 6.557 24 Si 0.990 3.010 25 H -0.285 1.285 26 H -0.231 1.231 27 H -0.265 1.265 28 H 0.093 0.907 29 H 0.101 0.899 30 H 0.122 0.878 31 H 0.086 0.914 32 H 0.110 0.890 33 H 0.110 0.890 34 H 0.077 0.923 35 H 0.081 0.919 36 H 0.073 0.927 37 H 0.074 0.926 38 H 0.070 0.930 39 H 0.068 0.932 40 H 0.074 0.926 41 H 0.073 0.927 42 H 0.060 0.940 43 H 0.045 0.955 44 H 0.058 0.942 45 H 0.062 0.938 46 H 0.047 0.953 47 H 0.063 0.937 48 H 0.057 0.943 49 H 0.045 0.955 50 H 0.059 0.941 51 H 0.100 0.900 52 H 0.086 0.914 53 H 0.162 0.838 54 H 0.119 0.881 55 H 0.410 0.590 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.045 -0.541 0.175 6.072 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 N -0.049 5.049 3 N -0.095 5.095 4 C -0.194 4.194 5 C 0.407 3.593 6 O -0.456 6.456 7 N -0.374 5.374 8 C -0.013 4.013 9 C -0.128 4.128 10 C 0.011 3.989 11 O -0.594 6.594 12 Si 1.452 2.548 13 C -0.621 4.621 14 C -0.622 4.622 15 C -0.427 4.427 16 C -0.193 4.193 17 C -0.198 4.198 18 C -0.194 4.194 19 C -0.004 4.004 20 C -0.239 4.239 21 C -0.095 4.095 22 C -0.155 4.155 23 O -0.368 6.368 24 Si 0.813 3.187 25 H -0.210 1.210 26 H -0.154 1.154 27 H -0.190 1.190 28 H 0.112 0.888 29 H 0.119 0.881 30 H 0.140 0.860 31 H 0.105 0.895 32 H 0.128 0.872 33 H 0.128 0.872 34 H 0.095 0.905 35 H 0.099 0.901 36 H 0.092 0.908 37 H 0.093 0.907 38 H 0.089 0.911 39 H 0.088 0.912 40 H 0.093 0.907 41 H 0.092 0.908 42 H 0.079 0.921 43 H 0.064 0.936 44 H 0.077 0.923 45 H 0.081 0.919 46 H 0.067 0.933 47 H 0.082 0.918 48 H 0.076 0.924 49 H 0.064 0.936 50 H 0.078 0.922 51 H 0.118 0.882 52 H 0.104 0.896 53 H 0.180 0.820 54 H 0.136 0.864 55 H 0.263 0.737 Dipole moment (debyes) X Y Z Total from point charges -5.681 -0.151 0.468 5.702 hybrid contribution 0.200 -0.418 -0.035 0.465 sum -5.481 -0.569 0.433 5.527 Atomic orbital electron populations 1.22548 0.70204 1.06593 1.05767 1.45781 1.09295 1.01748 1.48082 1.73527 1.02421 1.14405 1.19147 1.21666 0.91092 0.93859 1.12747 1.16719 0.86235 0.80701 0.75685 1.90767 1.24253 1.77097 1.53508 1.49975 1.13157 1.02928 1.71344 1.23453 0.95160 0.80126 1.02513 1.23143 0.94552 0.93055 1.02092 1.22142 0.89612 0.92054 0.95105 1.85345 1.54037 1.51965 1.68088 0.76055 0.63748 0.52853 0.62106 1.27119 1.06144 1.04880 1.23927 1.27137 1.18244 1.11966 1.04851 1.25971 1.11129 1.01139 1.04494 1.21534 0.96747 0.99320 1.01734 1.21604 1.01813 0.95087 1.01315 1.21537 1.01123 1.01825 0.94906 1.23523 0.89435 0.85530 1.01885 1.21586 0.97273 0.93884 1.11190 1.21192 0.90197 0.90995 1.07098 1.24237 0.94688 0.93020 1.03592 1.86371 1.34029 1.37283 1.79099 0.85137 0.77195 0.78147 0.78228 1.21027 1.15356 1.18995 0.88814 0.88063 0.85991 0.89520 0.87227 0.87215 0.90471 0.90104 0.90832 0.90658 0.91099 0.91240 0.90674 0.90778 0.92083 0.93614 0.92329 0.91911 0.93339 0.91815 0.92392 0.93595 0.92196 0.88179 0.89563 0.82004 0.86383 0.73715 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.37 10.12 127.77 1.29 0.92 16 2 N -0.26 -1.11 3.70 -355.93 -1.32 -2.42 16 3 N -0.26 -2.19 10.40 -48.17 -0.50 -2.69 16 4 C -0.04 -0.44 7.09 42.46 0.30 -0.14 16 5 C 0.62 8.92 8.06 86.75 0.70 9.62 16 6 O -0.58 -12.17 17.65 -3.95 -0.07 -12.24 16 7 N -0.64 -4.58 3.61 -839.62 -3.03 -7.61 16 8 C 0.11 0.04 8.41 86.49 0.73 0.76 16 9 C -0.11 0.24 4.19 -10.14 -0.04 0.19 16 10 C 0.09 -0.44 4.96 71.98 0.36 -0.09 16 11 O -0.63 1.51 8.56 -148.98 -1.28 0.24 16 12 Si 1.32 -5.59 8.45 68.60 0.58 -5.01 16 13 C -0.52 1.94 8.50 113.37 0.96 2.90 16 14 C -0.52 1.77 8.50 113.37 0.96 2.73 16 15 C -0.39 0.58 0.53 -10.79 -0.01 0.57 16 16 C -0.14 0.08 7.84 71.98 0.56 0.65 16 17 C -0.14 0.27 7.85 71.98 0.56 0.83 16 18 C -0.14 0.03 7.85 71.98 0.56 0.59 16 19 C 0.12 0.13 7.47 86.43 0.65 0.77 16 20 C -0.21 -2.04 9.35 22.41 0.21 -1.83 16 21 C 0.03 0.13 6.21 41.40 0.26 0.39 16 22 C -0.04 0.19 2.86 71.23 0.20 0.39 16 23 O -0.56 4.13 10.38 -148.98 -1.55 2.58 16 24 Si 0.99 -1.92 26.63 68.60 1.83 -0.09 16 25 H -0.28 -1.30 7.11 99.48 0.71 -0.59 16 26 H -0.23 1.14 7.11 99.48 0.71 1.85 16 27 H -0.27 -0.43 6.87 99.48 0.68 0.26 16 28 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 29 H 0.10 -0.64 8.14 -2.39 -0.02 -0.65 16 30 H 0.12 -0.96 6.77 -2.39 -0.02 -0.98 16 31 H 0.09 0.09 8.14 -2.39 -0.02 0.07 16 32 H 0.11 -0.42 8.10 -2.38 -0.02 -0.44 16 33 H 0.11 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.08 -0.64 6.95 -2.39 -0.02 -0.65 16 35 H 0.08 -0.68 7.21 -2.39 -0.02 -0.69 16 36 H 0.07 -0.36 7.48 -2.39 -0.02 -0.38 16 37 H 0.07 -0.28 7.79 -2.38 -0.02 -0.30 16 38 H 0.07 -0.21 7.79 -2.39 -0.02 -0.23 16 39 H 0.07 -0.17 7.79 -2.39 -0.02 -0.18 16 40 H 0.07 -0.26 7.79 -2.39 -0.02 -0.28 16 41 H 0.07 -0.34 7.48 -2.39 -0.02 -0.36 16 42 H 0.06 -0.13 7.79 -2.39 -0.02 -0.15 16 43 H 0.04 0.03 8.14 -2.39 -0.02 0.01 16 44 H 0.06 -0.02 7.97 -2.38 -0.02 -0.04 16 45 H 0.06 -0.20 7.80 -2.38 -0.02 -0.22 16 46 H 0.05 -0.02 8.14 -2.39 -0.02 -0.04 16 47 H 0.06 -0.22 7.79 -2.39 -0.02 -0.24 16 48 H 0.06 0.01 7.96 -2.39 -0.02 -0.01 16 49 H 0.04 0.05 8.14 -2.39 -0.02 0.03 16 50 H 0.06 -0.09 7.80 -2.39 -0.02 -0.11 16 51 H 0.10 -0.17 7.92 -2.38 -0.02 -0.19 16 52 H 0.09 0.23 7.53 -2.39 -0.02 0.21 16 53 H 0.16 1.46 6.86 -2.91 -0.02 1.44 16 54 H 0.12 -1.15 7.96 -2.39 -0.02 -1.17 16 55 H 0.41 -6.86 8.74 -74.06 -0.65 -7.51 16 Total: 0.00 -24.02 438.51 3.88 -20.15 By element: Atomic # 1 Polarization: -13.12 SS G_CDS: 0.95 Total: -12.17 kcal Atomic # 6 Polarization: 11.01 SS G_CDS: 8.27 Total: 19.28 kcal Atomic # 7 Polarization: -7.88 SS G_CDS: -4.85 Total: -12.73 kcal Atomic # 8 Polarization: -6.53 SS G_CDS: -2.89 Total: -9.42 kcal Atomic # 14 Polarization: -7.51 SS G_CDS: 2.41 Total: -5.10 kcal Total: -24.02 3.88 -20.15 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14186584_13259642.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.146 kcal (2) G-P(sol) polarization free energy of solvation -24.025 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.879 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.146 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.292 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds