Wall clock time and date at job start Thu Mar 4 2021 13:28:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46508 * 1 3 3 N 1.28472 * 124.88111 * 2 1 4 4 C 1.31804 * 110.07089 * 179.97438 * 3 2 1 5 5 C 1.47713 * 126.51567 * 180.26062 * 4 3 2 6 6 O 1.21579 * 119.99612 * 179.68999 * 5 4 3 7 7 N 1.34767 * 120.00150 * 359.69284 * 5 4 3 8 8 C 1.46502 * 119.99999 * 179.97438 * 7 5 4 9 9 H 1.09001 * 112.84852 * 25.33678 * 8 7 5 10 10 C 1.53792 * 113.61164 * 156.52941 * 8 7 5 11 11 C 1.53780 * 87.07896 * 89.11934 * 10 8 7 12 12 H 1.09004 * 113.61201 * 270.87871 * 11 10 8 13 13 C 1.50705 * 113.61415 * 140.06630 * 11 10 8 14 14 C 1.38200 * 119.98876 * 299.72106 * 13 11 10 15 15 C 1.38354 * 119.98288 * 179.76554 * 14 13 11 16 16 Br 1.89098 * 120.00725 * 180.25376 * 15 14 13 17 17 C 1.38305 * 119.97938 * 0.53434 * 15 14 13 18 18 C 1.38237 * 119.99069 * 359.71679 * 17 15 14 19 19 C 1.38225 * 120.01250 * 0.02562 * 18 17 15 20 20 C 1.53779 * 113.61532 * 254.13497 * 8 7 5 21 21 C 1.41505 * 106.96418 * 0.02562 * 4 3 2 22 22 C 1.35029 * 124.88584 * 180.02562 * 2 1 3 23 23 C 1.50696 * 126.38517 * 359.97438 * 22 2 1 24 24 O 1.42901 * 109.47449 * 330.02854 * 23 22 2 25 25 Si 1.86299 * 109.47275 * 210.02617 * 23 22 2 26 26 H 1.08993 * 109.47209 * 269.99839 * 1 2 3 27 27 H 1.08998 * 109.46883 * 30.00353 * 1 2 3 28 28 H 1.09004 * 109.46633 * 149.99641 * 1 2 3 29 29 H 0.96999 * 120.00294 * 0.02562 * 7 5 4 30 30 H 1.08997 * 113.60833 * 203.66864 * 10 8 7 31 31 H 1.08996 * 113.61079 * 334.48584 * 10 8 7 32 32 H 1.08000 * 120.00915 * 359.97438 * 14 13 11 33 33 H 1.07999 * 120.00318 * 179.74690 * 17 15 14 34 34 H 1.08001 * 119.99636 * 179.97438 * 18 17 15 35 35 H 1.07993 * 119.99261 * 179.97438 * 19 18 17 36 36 H 1.08995 * 113.61877 * 25.43587 * 20 8 7 37 37 H 1.09009 * 113.61246 * 156.33753 * 20 8 7 38 38 H 1.07997 * 127.24741 * 179.97438 * 21 4 3 39 39 H 1.09001 * 109.47116 * 90.02935 * 23 22 2 40 40 H 0.96699 * 113.99628 * 180.02562 * 24 23 22 41 41 H 1.48496 * 110.00034 * 298.68677 * 25 23 22 42 42 H 1.48503 * 109.99931 * 60.00154 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 7 2.1998 1.0539 0.0000 4 6 3.4740 0.7170 0.0006 5 6 4.6272 1.6400 0.0061 6 8 5.7597 1.1978 0.0117 7 7 4.4240 2.9723 0.0051 8 6 5.5678 3.8877 0.0112 9 1 6.4678 3.4434 -0.4139 10 6 5.2441 5.2818 -0.5517 11 6 4.8486 5.6815 0.8796 12 1 3.8010 5.4908 1.1125 13 6 5.2895 7.0709 1.2620 14 6 6.6328 7.3957 1.2555 15 6 7.0371 8.6727 1.6020 16 35 8.8744 9.1198 1.5864 17 6 6.0976 9.6203 1.9652 18 6 4.7546 9.2930 1.9764 19 6 4.3506 8.0186 1.6251 20 6 5.8009 4.5734 1.3678 21 6 3.5272 -0.6971 0.0003 22 6 2.2374 -1.1076 -0.0005 23 6 1.7535 -2.5348 -0.0006 24 8 0.4955 -2.6114 0.6729 25 14 2.9946 -3.6114 0.8777 26 1 -0.3633 0.0000 1.0276 27 1 -0.3633 0.8899 -0.5139 28 1 -0.3633 -0.8900 -0.5139 29 1 3.5205 3.3251 0.0010 30 1 6.1175 5.8142 -0.9282 31 1 4.4104 5.2863 -1.2539 32 1 7.3665 6.6538 0.9769 33 1 6.4130 10.6161 2.2396 34 1 4.0208 10.0328 2.2604 35 1 3.3014 7.7631 1.6343 36 1 5.4155 4.0067 2.2154 37 1 6.8263 4.9125 1.5152 38 1 4.4109 -1.3179 0.0003 39 1 1.6370 -2.8789 -1.0283 40 1 0.1236 -3.5032 0.7113 41 1 4.2986 -3.5654 0.1687 42 1 3.1626 -3.1527 2.2800 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14189268_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:28:48 Heat of formation + Delta-G solvation = 74.878111 kcal Electronic energy + Delta-G solvation = -26864.334520 eV Core-core repulsion = 22860.040802 eV Total energy + Delta-G solvation = -4004.293718 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.052 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.97394 -41.64012 -40.36400 -38.86439 -37.88955 -34.94027 -34.39814 -33.35612 -32.85015 -31.79455 -30.27030 -28.69981 -26.95114 -26.79410 -26.25401 -24.56694 -23.44939 -22.48648 -22.33315 -21.04300 -20.23545 -18.64017 -18.39570 -18.15849 -17.64764 -17.49475 -17.09215 -16.51265 -16.27992 -16.04541 -15.74539 -15.59931 -15.23040 -15.16067 -14.96510 -14.65644 -14.51825 -14.30626 -13.98364 -13.76344 -13.53733 -13.46863 -13.44089 -13.03371 -12.95825 -12.41729 -12.18525 -12.10786 -12.08490 -11.95654 -11.60316 -11.49149 -11.36027 -11.24467 -10.94575 -10.42969 -10.15708 -9.95461 -9.86629 -9.65053 -5.03058 0.07715 0.23829 0.28379 0.61160 0.65228 1.17824 1.51125 1.66611 1.93074 2.04446 2.11648 2.54525 3.02116 3.10708 3.35340 3.51856 3.56844 3.61055 3.78967 3.87519 3.91126 4.02166 4.18158 4.22120 4.25295 4.30472 4.35845 4.38239 4.41879 4.47776 4.52076 4.63240 4.68361 4.69920 4.75513 4.88990 4.92242 4.94493 5.02552 5.04824 5.18719 5.32089 5.42074 5.54052 5.57138 5.81389 6.24023 6.66788 6.83134 6.96523 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.085 3.915 2 N -0.257 5.257 3 N -0.258 5.258 4 C -0.037 4.037 5 C 0.606 3.394 6 O -0.569 6.569 7 N -0.685 5.685 8 C 0.112 3.888 9 H 0.091 0.909 10 C -0.122 4.122 11 C -0.063 4.063 12 H 0.115 0.885 13 C -0.068 4.068 14 C -0.098 4.098 15 C -0.102 4.102 16 Br -0.061 7.061 17 C -0.107 4.107 18 C -0.113 4.113 19 C -0.103 4.103 20 C -0.144 4.144 21 C -0.218 4.218 22 C 0.029 3.971 23 C -0.042 4.042 24 O -0.558 6.558 25 Si 0.809 3.191 26 H 0.094 0.906 27 H 0.104 0.896 28 H 0.124 0.876 29 H 0.417 0.583 30 H 0.104 0.896 31 H 0.090 0.910 32 H 0.135 0.865 33 H 0.139 0.861 34 H 0.153 0.847 35 H 0.149 0.851 36 H 0.066 0.934 37 H 0.098 0.902 38 H 0.154 0.846 39 H 0.119 0.881 40 H 0.415 0.585 41 H -0.294 1.294 42 H -0.312 1.312 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.390 -3.864 -1.563 11.195 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 N -0.046 5.046 3 N -0.096 5.096 4 C -0.194 4.194 5 C 0.392 3.608 6 O -0.446 6.446 7 N -0.336 5.336 8 C 0.007 3.993 9 H 0.109 0.891 10 C -0.159 4.159 11 C -0.081 4.081 12 H 0.133 0.867 13 C -0.069 4.069 14 C -0.118 4.118 15 C -0.181 4.181 16 Br 0.024 6.976 17 C -0.126 4.126 18 C -0.132 4.132 19 C -0.121 4.121 20 C -0.182 4.182 21 C -0.246 4.246 22 C -0.096 4.096 23 C -0.153 4.153 24 O -0.369 6.369 25 Si 0.715 3.285 26 H 0.112 0.888 27 H 0.123 0.877 28 H 0.142 0.858 29 H 0.254 0.746 30 H 0.122 0.878 31 H 0.109 0.891 32 H 0.153 0.847 33 H 0.156 0.844 34 H 0.171 0.829 35 H 0.167 0.833 36 H 0.085 0.915 37 H 0.116 0.884 38 H 0.171 0.829 39 H 0.137 0.863 40 H 0.269 0.731 41 H -0.222 1.222 42 H -0.240 1.240 Dipole moment (debyes) X Y Z Total from point charges -8.910 -2.472 -1.102 9.312 hybrid contribution 0.200 0.081 -0.015 0.216 sum -8.710 -2.391 -1.118 9.101 Atomic orbital electron populations 1.22612 0.69854 1.06885 1.05907 1.45802 1.09427 1.01517 1.47837 1.73442 1.02252 1.14669 1.19223 1.21720 0.91254 0.93824 1.12647 1.16992 0.86170 0.82245 0.75405 1.90788 1.24003 1.77838 1.52000 1.45393 1.10754 1.04140 1.73311 1.21960 0.89550 0.89756 0.98042 0.89124 1.23361 1.03548 0.92968 0.96073 1.21638 1.00511 0.89522 0.96445 0.86742 1.19802 0.92379 0.95950 0.98801 1.21084 0.96727 0.94626 0.99318 1.21936 0.90688 0.97474 1.08040 1.96759 1.09105 1.93820 1.97883 1.21362 0.93117 0.99306 0.98849 1.21485 0.95345 0.97471 0.98869 1.21527 1.00741 0.92830 0.97014 1.23613 1.00925 0.96595 0.97086 1.21522 0.97107 0.94252 1.11720 1.21432 0.90261 0.91309 1.06613 1.24350 0.95341 0.91621 1.03998 1.86351 1.33770 1.37819 1.78990 0.94608 0.75449 0.83723 0.74706 0.88755 0.87746 0.85763 0.74566 0.87800 0.89127 0.84690 0.84355 0.82938 0.83293 0.91537 0.88352 0.82854 0.86313 0.73070 1.22200 1.24022 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.45 10.12 127.77 1.29 0.85 16 2 N -0.26 -0.91 3.70 -355.92 -1.32 -2.22 16 3 N -0.26 -1.85 11.67 -48.17 -0.56 -2.41 16 4 C -0.04 -0.40 7.13 42.46 0.30 -0.09 16 5 C 0.61 7.26 7.82 86.75 0.68 7.94 16 6 O -0.57 -10.84 16.54 -3.97 -0.07 -10.91 16 7 N -0.69 -3.06 5.26 -443.01 -2.33 -5.39 16 8 C 0.11 0.28 4.30 45.52 0.20 0.47 16 9 H 0.09 0.57 7.50 -2.39 -0.02 0.55 16 10 C -0.12 0.30 7.29 31.12 0.23 0.53 16 11 C -0.06 0.15 3.87 -10.92 -0.04 0.11 16 12 H 0.11 -0.56 8.09 -2.38 -0.02 -0.58 16 13 C -0.07 0.02 5.29 -19.87 -0.11 -0.08 16 14 C -0.10 -0.20 8.37 22.29 0.19 -0.01 16 15 C -0.10 -0.36 6.22 22.31 0.14 -0.23 16 16 Br -0.06 -0.28 33.70 -20.37 -0.69 -0.97 16 17 C -0.11 -0.16 9.79 22.29 0.22 0.06 16 18 C -0.11 0.15 10.05 22.27 0.22 0.38 16 19 C -0.10 0.19 9.71 22.27 0.22 0.40 16 20 C -0.14 -0.14 7.27 31.21 0.23 0.08 16 21 C -0.22 -2.18 9.35 22.41 0.21 -1.97 16 22 C 0.03 0.12 6.21 41.40 0.26 0.38 16 23 C -0.04 0.22 2.87 71.23 0.20 0.42 16 24 O -0.56 4.91 10.38 -148.98 -1.55 3.36 16 25 Si 0.81 -2.76 31.31 68.60 2.15 -0.61 16 26 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 27 H 0.10 -0.80 8.14 -2.39 -0.02 -0.82 16 28 H 0.12 -1.11 6.77 -2.38 -0.02 -1.12 16 29 H 0.42 0.17 8.43 -92.71 -0.78 -0.61 16 30 H 0.10 -0.29 7.73 -2.39 -0.02 -0.30 16 31 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 32 H 0.14 0.12 6.65 -2.91 -0.02 0.10 16 33 H 0.14 -0.08 8.06 -2.91 -0.02 -0.10 16 34 H 0.15 -0.91 8.06 -2.91 -0.02 -0.93 16 35 H 0.15 -0.94 8.05 -2.91 -0.02 -0.96 16 36 H 0.07 0.23 8.14 -2.39 -0.02 0.21 16 37 H 0.10 0.07 6.31 -2.38 -0.02 0.05 16 38 H 0.15 1.67 6.91 -2.91 -0.02 1.65 16 39 H 0.12 -1.25 7.96 -2.39 -0.02 -1.27 16 40 H 0.42 -8.05 8.74 -74.06 -0.65 -8.70 16 41 H -0.29 -1.15 6.94 99.48 0.69 -0.46 16 42 H -0.31 -2.10 7.11 99.48 0.71 -1.40 16 Total: 0.00 -25.32 374.10 -0.25 -25.57 By element: Atomic # 1 Polarization: -15.33 SS G_CDS: -0.32 Total: -15.66 kcal Atomic # 6 Polarization: 4.81 SS G_CDS: 4.43 Total: 9.24 kcal Atomic # 7 Polarization: -5.82 SS G_CDS: -4.21 Total: -10.02 kcal Atomic # 8 Polarization: -5.94 SS G_CDS: -1.61 Total: -7.55 kcal Atomic # 14 Polarization: -2.76 SS G_CDS: 2.15 Total: -0.61 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.69 Total: -0.97 kcal Total: -25.32 -0.25 -25.57 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14189268_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.450 kcal (2) G-P(sol) polarization free energy of solvation -25.320 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.572 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.878 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds