Wall clock time and date at job start Thu Mar 4 2021 13:49:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34781 * 1 3 3 O 1.21279 * 119.99780 * 2 1 4 4 C 1.50699 * 120.00108 * 179.97438 * 2 1 3 5 5 N 1.46502 * 112.90287 * 24.82676 * 4 2 1 6 6 C 1.34779 * 119.99923 * 65.99660 * 5 4 2 7 7 O 1.21587 * 120.00180 * 5.00623 * 6 5 4 8 8 C 1.47581 * 119.99637 * 184.99660 * 6 5 4 9 9 C 1.36492 * 120.00550 * 180.02562 * 8 6 5 10 10 N 1.35949 * 120.50507 * 179.97438 * 9 8 6 11 11 C 1.36998 * 132.41580 * 179.97438 * 10 9 8 12 12 C 1.50700 * 126.42705 * 0.06061 * 11 10 9 13 13 O 1.42901 * 109.47478 * 330.00267 * 12 11 10 14 14 Si 1.86301 * 109.47235 * 210.00000 * 12 11 10 15 15 C 1.35007 * 107.14305 * 180.02562 * 11 10 9 16 16 N 1.33580 * 108.65678 * 359.97438 * 15 11 10 17 17 C 1.32420 * 109.22444 * 0.02562 * 16 15 11 18 18 C 1.41247 * 132.11923 * 179.97438 * 17 16 15 19 19 Br 1.89101 * 120.25358 * 359.97438 * 18 17 16 20 20 C 1.35709 * 119.48891 * 179.79409 * 18 17 16 21 21 C 1.53778 * 113.61314 * 253.57529 * 4 2 1 22 22 C 1.53955 * 87.10951 * 220.09090 * 21 4 2 23 23 H 1.08995 * 113.66760 * 139.89564 * 22 21 4 24 24 O 1.42911 * 113.61293 * 270.84505 * 22 21 4 25 25 C 1.53775 * 113.61305 * 156.07684 * 4 2 1 26 26 H 0.97001 * 119.99843 * 174.99590 * 1 2 3 27 27 H 0.97004 * 119.99648 * 355.00136 * 1 2 3 28 28 H 0.96993 * 120.00060 * 245.98988 * 5 4 2 29 29 H 1.08003 * 119.74904 * 359.97438 * 9 8 6 30 30 H 1.09002 * 109.46997 * 90.00173 * 12 11 10 31 31 H 0.96702 * 113.99878 * 300.00154 * 13 12 11 32 32 H 1.48496 * 110.00003 * 58.68361 * 14 12 11 33 33 H 1.48501 * 109.99665 * 180.02562 * 14 12 11 34 34 H 1.08003 * 125.66813 * 179.97438 * 15 11 10 35 35 H 1.08000 * 120.22769 * 180.23067 * 20 18 17 36 36 H 1.08992 * 113.61890 * 334.56610 * 21 4 2 37 37 H 1.09004 * 113.61030 * 105.39242 * 21 4 2 38 38 H 0.96697 * 113.99694 * 277.42457 * 24 22 21 39 39 H 1.09003 * 113.61744 * 254.53166 * 25 4 2 40 40 H 1.08997 * 113.61808 * 25.34808 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.3257 -2.4115 -0.5656 6 6 0.9927 -2.4021 -1.8715 7 8 1.4121 -1.5232 -2.5996 8 6 0.1193 -3.4588 -2.4179 9 6 -0.2177 -3.4498 -3.7405 10 7 -1.0212 -4.4184 -4.2546 11 6 -1.5052 -4.6442 -5.5162 12 6 -1.2411 -3.8048 -6.7395 13 8 -1.0357 -2.4455 -6.3493 14 14 -2.7030 -3.9065 -7.8900 15 6 -2.2626 -5.7603 -5.4579 16 7 -2.2529 -6.2183 -4.2031 17 6 -1.5068 -5.4213 -3.4538 18 6 -1.1712 -5.4512 -2.0821 19 35 -1.8353 -6.8277 -0.9685 20 6 -0.3655 -4.4865 -1.5703 21 6 2.7543 -1.6387 1.3523 22 6 3.9675 -2.1473 0.5523 23 1 4.9268 -1.8824 0.9967 24 8 3.8811 -3.5291 0.1982 25 6 3.5247 -1.1948 -0.5708 26 1 -0.4850 -0.8369 -0.0733 27 1 -0.4850 0.8369 0.0732 28 1 1.0519 -3.1508 -0.0006 29 1 0.1569 -2.6671 -4.3836 30 1 -0.3514 -4.1749 -7.2490 31 1 -1.7889 -2.0503 -5.8893 32 1 -3.9285 -3.4345 -7.1969 33 1 -2.4546 -3.0833 -9.1007 34 1 -2.7889 -6.2083 -6.2879 35 1 -0.0982 -4.4999 -0.5240 36 1 2.9713 -0.7610 1.9609 37 1 2.2353 -2.4206 1.9067 38 1 4.1582 -4.1332 0.9006 39 1 3.6285 -1.6191 -1.5695 40 1 3.9517 -0.1953 -0.4893 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14243910_12335884.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:49:08 Heat of formation + Delta-G solvation = -17.636204 kcal Electronic energy + Delta-G solvation = -31500.076590 eV Core-core repulsion = 26944.518474 eV Total energy + Delta-G solvation = -4555.558116 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.031 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -44.28159 -42.41106 -40.48973 -39.25636 -38.51759 -38.09872 -36.25911 -35.35852 -34.87570 -34.02830 -32.39825 -31.77691 -30.27350 -27.40793 -27.02530 -26.87761 -25.40933 -24.09445 -22.74308 -22.43710 -22.00079 -20.52244 -19.64279 -19.21871 -18.88236 -18.29652 -18.03752 -17.92535 -17.66466 -17.46516 -16.68171 -16.36514 -16.23529 -16.14078 -16.04954 -15.82453 -15.67797 -15.23265 -15.04355 -14.81579 -14.68140 -14.12707 -13.88117 -13.53446 -13.44323 -13.31872 -13.24656 -13.04342 -12.79335 -12.40466 -12.17007 -12.02235 -11.57824 -11.46334 -11.38798 -11.31450 -11.21361 -11.09160 -11.04442 -10.82841 -10.24809 -10.03214 -9.10115 -4.95807 -0.94139 -0.39778 0.18766 0.93243 1.07456 1.30641 1.37734 1.64667 1.75412 1.77248 1.97038 2.15293 2.43545 2.80606 2.95601 3.01350 3.08879 3.26835 3.31026 3.39308 3.42992 3.46614 3.64728 3.81629 3.89405 4.12957 4.26361 4.31759 4.37762 4.42630 4.47567 4.62285 4.71170 4.74267 4.83021 4.89639 4.94601 5.20460 5.31226 5.54094 5.71587 6.14736 6.15784 6.25786 6.48421 6.85255 6.92352 7.13004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.835 5.835 2 C 0.525 3.475 3 O -0.579 6.579 4 C 0.131 3.869 5 N -0.674 5.674 6 C 0.580 3.420 7 O -0.554 6.554 8 C -0.164 4.164 9 C 0.157 3.843 10 N -0.358 5.358 11 C -0.091 4.091 12 C -0.055 4.055 13 O -0.548 6.548 14 Si 0.817 3.183 15 C 0.047 3.953 16 N -0.491 5.491 17 C 0.225 3.775 18 C -0.077 4.077 19 Br 0.009 6.991 20 C -0.023 4.023 21 C -0.137 4.137 22 C 0.094 3.906 23 H 0.096 0.904 24 O -0.559 6.559 25 C -0.131 4.131 26 H 0.410 0.590 27 H 0.407 0.593 28 H 0.424 0.576 29 H 0.186 0.814 30 H 0.137 0.863 31 H 0.386 0.614 32 H -0.288 1.288 33 H -0.291 1.291 34 H 0.228 0.772 35 H 0.189 0.811 36 H 0.114 0.886 37 H 0.122 0.878 38 H 0.402 0.598 39 H 0.065 0.935 40 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.609 -5.138 4.254 6.862 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.398 5.398 2 C 0.309 3.691 3 O -0.458 6.458 4 C 0.040 3.960 5 N -0.329 5.329 6 C 0.367 3.633 7 O -0.432 6.432 8 C -0.172 4.172 9 C 0.030 3.970 10 N -0.032 5.032 11 C -0.201 4.201 12 C -0.162 4.162 13 O -0.355 6.355 14 Si 0.718 3.282 15 C -0.103 4.103 16 N -0.210 5.210 17 C -0.020 4.020 18 C -0.159 4.159 19 Br 0.094 6.906 20 C -0.049 4.049 21 C -0.175 4.175 22 C 0.034 3.966 23 H 0.113 0.887 24 O -0.367 6.367 25 C -0.170 4.170 26 H 0.241 0.759 27 H 0.238 0.762 28 H 0.265 0.735 29 H 0.203 0.797 30 H 0.154 0.846 31 H 0.235 0.765 32 H -0.214 1.214 33 H -0.218 1.218 34 H 0.245 0.755 35 H 0.206 0.794 36 H 0.132 0.868 37 H 0.141 0.859 38 H 0.253 0.747 39 H 0.084 0.916 40 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -1.745 -4.600 3.128 5.830 hybrid contribution 0.192 1.589 0.699 1.747 sum -1.553 -3.011 3.828 5.112 Atomic orbital electron populations 1.43726 1.06611 1.13936 1.75539 1.20815 0.83459 0.90818 0.74029 1.90751 1.69245 1.34138 1.51639 1.21467 0.90948 0.83924 0.99612 1.45159 1.54776 1.24036 1.08978 1.17647 0.79490 0.83821 0.82363 1.90903 1.54740 1.38673 1.58908 1.19099 1.05437 0.99695 0.92938 1.22160 0.88551 0.90834 0.95449 1.42720 1.31864 1.18918 1.09666 1.22390 1.07426 1.04562 0.85758 1.25220 1.15127 0.80125 0.95743 1.86603 1.44578 1.25388 1.78948 0.93460 0.70913 0.89232 0.74552 1.23027 0.98815 0.93031 0.95392 1.70851 1.19814 1.26783 1.03581 1.20778 0.99466 0.88719 0.93077 1.20585 1.05153 1.00056 0.90151 1.96853 1.86386 1.46530 1.60783 1.21344 0.92146 0.89579 1.01788 1.23942 0.96694 1.04265 0.92581 1.22580 0.97781 0.82301 0.93903 0.88660 1.86471 1.89959 1.15074 1.45241 1.23343 0.92970 1.00762 0.99919 0.75909 0.76160 0.73517 0.79717 0.84555 0.76492 1.21436 1.21776 0.75536 0.79379 0.86811 0.85934 0.74658 0.91640 0.87843 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 1.76 8.76 -173.53 -1.52 0.24 16 2 C 0.53 2.33 6.75 87.66 0.59 2.92 16 3 O -0.58 -7.95 16.88 -3.03 -0.05 -8.01 16 4 C 0.13 -0.17 1.00 3.38 0.00 -0.16 16 5 N -0.67 3.54 3.81 -427.01 -1.63 1.92 16 6 C 0.58 0.52 7.01 86.71 0.61 1.13 16 7 O -0.55 -5.44 14.82 -3.99 -0.06 -5.50 16 8 C -0.16 0.20 5.84 -20.35 -0.12 0.08 16 9 C 0.16 0.27 9.91 83.65 0.83 1.10 16 10 N -0.36 -0.95 2.93 -337.71 -0.99 -1.94 16 11 C -0.09 -0.01 6.24 41.01 0.26 0.24 16 12 C -0.05 0.16 3.06 71.24 0.22 0.38 16 13 O -0.55 -0.20 10.90 -148.98 -1.62 -1.83 16 14 Si 0.82 -4.43 31.18 68.60 2.14 -2.29 16 15 C 0.05 0.00 10.44 83.68 0.87 0.87 16 16 N -0.49 -2.93 11.30 -194.10 -2.19 -5.12 16 17 C 0.22 1.03 7.59 134.18 1.02 2.05 16 18 C -0.08 -0.04 6.24 22.42 0.14 0.10 16 19 Br 0.01 0.00 33.72 -20.37 -0.69 -0.69 16 20 C -0.02 0.11 9.26 22.55 0.21 0.32 16 21 C -0.14 1.09 7.20 31.18 0.22 1.31 16 22 C 0.09 -0.50 5.29 31.18 0.16 -0.33 16 23 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 24 O -0.56 3.47 13.10 -148.98 -1.95 1.52 16 25 C -0.13 -0.38 6.67 31.12 0.21 -0.18 16 26 H 0.41 -3.00 7.84 -92.71 -0.73 -3.72 16 27 H 0.41 -1.21 8.93 -92.71 -0.83 -2.04 16 28 H 0.42 -5.19 6.71 -92.71 -0.62 -5.81 16 29 H 0.19 0.58 6.19 -2.91 -0.02 0.56 16 30 H 0.14 -0.67 7.96 -2.39 -0.02 -0.69 16 31 H 0.39 -1.56 8.70 -74.06 -0.64 -2.21 16 32 H -0.29 -0.05 7.11 99.48 0.71 0.66 16 33 H -0.29 -0.49 7.11 99.48 0.71 0.21 16 34 H 0.23 -1.95 6.90 -2.91 -0.02 -1.97 16 35 H 0.19 -2.40 6.45 -2.91 -0.02 -2.42 16 36 H 0.11 -0.81 8.09 -2.39 -0.02 -0.83 16 37 H 0.12 -1.74 8.09 -2.39 -0.02 -1.76 16 38 H 0.40 -6.05 9.12 -74.06 -0.68 -6.72 16 39 H 0.06 0.55 7.19 -2.39 -0.02 0.54 16 40 H 0.10 0.60 7.38 -2.39 -0.02 0.58 16 Total: 0.00 -32.66 361.83 -5.59 -38.25 By element: Atomic # 1 Polarization: -24.12 SS G_CDS: -2.25 Total: -26.37 kcal Atomic # 6 Polarization: 4.59 SS G_CDS: 5.22 Total: 9.82 kcal Atomic # 7 Polarization: 1.43 SS G_CDS: -6.33 Total: -4.90 kcal Atomic # 8 Polarization: -10.13 SS G_CDS: -3.69 Total: -13.81 kcal Atomic # 14 Polarization: -4.43 SS G_CDS: 2.14 Total: -2.29 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.69 kcal Total: -32.66 -5.59 -38.25 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14243910_12335884.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.613 kcal (2) G-P(sol) polarization free energy of solvation -32.656 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.593 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.249 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds