Wall clock time and date at job start Thu Mar 4 2021 13:00:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28462 * 124.88227 * 2 1 4 4 C 1.31814 * 110.07153 * 180.20018 * 3 2 1 5 5 C 1.47710 * 126.51739 * 179.81562 * 4 3 2 6 6 O 1.21570 * 119.99746 * 179.69097 * 5 4 3 7 7 N 1.34778 * 120.00087 * 359.69335 * 5 4 3 8 8 C 1.46500 * 119.99919 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.85132 * 25.33083 * 8 7 5 10 10 C 1.53781 * 113.61711 * 156.52821 * 8 7 5 11 11 C 1.53785 * 87.08277 * 89.19510 * 10 8 7 12 12 H 1.08995 * 113.61449 * 270.88726 * 11 10 8 13 13 C 1.50693 * 113.61331 * 140.06613 * 11 10 8 14 14 C 1.37924 * 119.92349 * 119.72694 * 13 11 10 15 15 C 1.39658 * 119.84420 * 179.79157 * 14 13 11 16 16 C 1.43201 * 120.14961 * 180.22770 * 15 14 13 17 17 N 9.92563 * 99.63815 * 195.76631 * 5 1 2 18 18 C 1.39613 * 119.70189 * 0.48394 * 15 14 13 19 19 C 1.37976 * 119.84127 * 359.74836 * 18 15 14 20 20 C 1.38334 * 120.15244 * 0.02562 * 19 18 15 21 21 C 1.53776 * 87.07661 * 25.43397 * 11 10 8 22 22 C 1.41499 * 106.96166 * 359.55663 * 4 3 2 23 23 C 1.35026 * 124.88521 * 179.70417 * 2 1 3 24 24 C 1.50710 * 126.38795 * 359.96465 * 23 2 1 25 25 O 1.42905 * 109.46772 * 329.99630 * 24 23 2 26 26 Si 1.86297 * 109.47117 * 209.99519 * 24 23 2 27 27 H 1.09004 * 109.47236 * 270.28806 * 1 2 3 28 28 H 1.09000 * 109.47207 * 30.29135 * 1 2 3 29 29 H 1.08996 * 109.47170 * 150.29292 * 1 2 3 30 30 H 0.96998 * 120.00229 * 359.97438 * 7 5 4 31 31 H 1.08993 * 113.62030 * 203.74957 * 10 8 7 32 32 H 1.09006 * 113.61109 * 334.56882 * 10 8 7 33 33 H 1.07993 * 120.07951 * 359.97438 * 14 13 11 34 34 H 1.07997 * 120.08002 * 179.72238 * 18 15 14 35 35 H 1.08003 * 119.92174 * 180.02562 * 19 18 15 36 36 H 1.08002 * 119.84426 * 179.97438 * 20 19 18 37 37 H 1.09003 * 113.61687 * 220.01420 * 21 11 10 38 38 H 1.09009 * 113.61565 * 89.11769 * 21 11 10 39 39 H 1.08005 * 127.24853 * 180.25864 * 22 4 3 40 40 H 1.08998 * 109.47343 * 89.99086 * 24 23 2 41 41 H 0.96705 * 113.99889 * 299.99827 * 25 24 23 42 42 H 1.48501 * 110.00129 * 179.97438 * 26 24 23 43 43 H 1.48497 * 110.00406 * 301.31818 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7169 -0.0043 5 6 4.6272 1.6398 -0.0096 6 8 5.7596 1.1977 -0.0076 7 7 4.4240 2.9722 -0.0166 8 6 5.5678 3.8876 -0.0224 9 1 6.4652 3.4410 -0.4505 10 6 5.2408 5.2786 -0.5908 11 6 4.8560 5.6867 0.8411 12 1 3.8100 5.4979 1.0827 13 6 5.3004 7.0779 1.2123 14 6 4.3653 8.0265 1.5699 15 6 4.7794 9.3141 1.9178 16 6 3.8144 10.3027 2.2948 17 7 3.0478 11.0868 2.5940 18 6 6.1380 9.6347 1.8913 19 6 7.0623 8.6772 1.5270 20 6 6.6455 7.4024 1.1880 21 6 5.8096 4.5828 1.3278 22 6 3.5272 -0.6971 0.0032 23 6 2.2373 -1.1076 0.0057 24 6 1.7534 -2.5349 0.0138 25 8 0.4958 -2.6076 0.6886 26 14 2.9951 -3.6065 0.8972 27 1 -0.3634 0.0052 1.0277 28 1 -0.3633 0.8873 -0.5183 29 1 -0.3633 -0.8926 -0.5093 30 1 3.5205 3.3250 -0.0185 31 1 6.1116 5.8084 -0.9768 32 1 4.4019 5.2796 -1.2868 33 1 3.3155 7.7734 1.5836 34 1 6.4646 10.6297 2.1548 35 1 8.1136 8.9237 1.5064 36 1 7.3733 6.6570 0.9032 37 1 5.4291 4.0224 2.1818 38 1 6.8361 4.9224 1.4665 39 1 4.4108 -1.3181 0.0062 40 1 1.6361 -2.8846 -1.0118 41 1 0.5254 -2.3111 1.6086 42 1 2.5294 -5.0165 0.9126 43 1 4.3155 -3.5147 0.2239 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14329782_13259642.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:00:13 Heat of formation + Delta-G solvation = 102.580642 kcal Electronic energy + Delta-G solvation = -27441.998780 eV Core-core repulsion = 23456.846144 eV Total energy + Delta-G solvation = -3985.152635 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.137 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -43.85083 -41.52817 -40.34010 -38.96200 -38.00831 -37.43717 -34.76167 -34.25269 -32.65124 -32.22252 -31.82902 -28.60823 -26.90779 -26.63832 -26.15280 -24.97090 -24.15540 -22.75018 -22.22776 -21.06206 -20.68698 -19.12880 -18.95523 -17.62646 -17.57897 -17.26425 -17.06775 -16.94815 -16.53270 -16.14540 -15.78811 -15.73476 -15.50503 -15.30656 -15.14807 -15.03627 -14.82314 -14.43804 -14.16333 -14.01593 -13.98938 -13.76994 -13.59414 -13.43751 -13.37263 -12.95081 -12.78829 -12.61211 -12.47999 -12.35774 -11.85400 -11.76535 -11.66615 -11.30828 -11.19352 -10.91942 -10.28955 -10.00003 -9.97036 -9.89198 -9.64562 -4.96533 -0.17856 0.38692 0.43762 0.80528 1.20184 1.55037 1.56267 1.71725 1.91409 1.97558 2.10158 2.27945 2.83422 2.86983 3.19279 3.32091 3.35899 3.51201 3.72613 3.77227 3.94505 4.00423 4.04053 4.20564 4.21810 4.30578 4.34220 4.36676 4.41899 4.48979 4.53489 4.61312 4.72048 4.75040 4.79529 4.85729 4.92077 5.02625 5.07098 5.10738 5.21049 5.21290 5.36520 5.44247 5.53196 5.66489 5.70580 5.91484 6.38282 6.40077 6.57274 6.82017 7.12115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.259 5.259 3 N -0.259 5.259 4 C -0.038 4.038 5 C 0.606 3.394 6 O -0.568 6.568 7 N -0.689 5.689 8 C 0.109 3.891 9 H 0.092 0.908 10 C -0.124 4.124 11 C -0.067 4.067 12 H 0.106 0.894 13 C -0.074 4.074 14 C -0.069 4.069 15 C -0.046 4.046 16 C 0.276 3.724 17 N -0.474 5.474 18 C -0.076 4.076 19 C -0.116 4.116 20 C -0.082 4.082 21 C -0.139 4.139 22 C -0.198 4.198 23 C -0.006 4.006 24 C -0.035 4.035 25 O -0.543 6.543 26 Si 0.788 3.212 27 H 0.109 0.891 28 H 0.099 0.901 29 H 0.115 0.885 30 H 0.415 0.585 31 H 0.113 0.887 32 H 0.082 0.918 33 H 0.138 0.862 34 H 0.140 0.860 35 H 0.156 0.844 36 H 0.151 0.849 37 H 0.066 0.934 38 H 0.110 0.890 39 H 0.160 0.840 40 H 0.127 0.873 41 H 0.398 0.602 42 H -0.282 1.282 43 H -0.291 1.291 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.850 -3.189 0.544 3.345 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.048 5.048 3 N -0.097 5.097 4 C -0.196 4.196 5 C 0.392 3.608 6 O -0.445 6.445 7 N -0.340 5.340 8 C 0.004 3.996 9 H 0.111 0.889 10 C -0.162 4.162 11 C -0.085 4.085 12 H 0.124 0.876 13 C -0.074 4.074 14 C -0.089 4.089 15 C -0.050 4.050 16 C -0.038 4.038 17 N -0.150 5.150 18 C -0.096 4.096 19 C -0.134 4.134 20 C -0.100 4.100 21 C -0.177 4.177 22 C -0.226 4.226 23 C -0.132 4.132 24 C -0.146 4.146 25 O -0.351 6.351 26 Si 0.692 3.308 27 H 0.128 0.872 28 H 0.118 0.882 29 H 0.133 0.867 30 H 0.252 0.748 31 H 0.131 0.869 32 H 0.100 0.900 33 H 0.155 0.845 34 H 0.158 0.842 35 H 0.174 0.826 36 H 0.169 0.831 37 H 0.084 0.916 38 H 0.128 0.872 39 H 0.177 0.823 40 H 0.145 0.855 41 H 0.249 0.751 42 H -0.209 1.209 43 H -0.218 1.218 Dipole moment (debyes) X Y Z Total from point charges -1.761 -2.228 0.382 2.865 hybrid contribution 0.076 -0.335 -0.660 0.744 sum -1.684 -2.563 -0.278 3.079 Atomic orbital electron populations 1.22664 0.70365 1.06536 1.06589 1.45711 1.09067 1.01670 1.48332 1.73469 1.02464 1.14656 1.19158 1.21759 0.91049 0.94144 1.12604 1.17013 0.86260 0.82177 0.75376 1.90790 1.23959 1.77794 1.51938 1.45454 1.10766 1.04353 1.73418 1.22002 0.89511 0.89689 0.98427 0.88942 1.23412 1.03648 0.93237 0.95874 1.21577 1.00474 0.89809 0.96669 0.87624 1.19659 0.93324 0.95027 0.99354 1.21192 1.00822 0.90586 0.96328 1.16095 0.90359 0.90758 1.07739 1.26198 0.92658 0.92680 0.92249 1.81342 1.11088 1.11407 1.11165 1.21419 0.90430 1.01015 0.96743 1.21393 1.00896 0.92585 0.98488 1.21604 0.95571 0.97052 0.95820 1.23577 1.01229 0.96060 0.96845 1.21622 0.97283 0.93852 1.09859 1.22118 0.90631 0.92264 1.08175 1.24797 0.94673 0.92070 1.03077 1.86482 1.28830 1.88842 1.30921 0.93181 0.73511 0.75616 0.88526 0.87219 0.88228 0.86709 0.74795 0.86911 0.89962 0.84453 0.84174 0.82594 0.83100 0.91555 0.87192 0.82265 0.85546 0.75124 1.20894 1.21760 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.67 10.12 127.77 1.29 0.62 16 2 N -0.26 0.34 3.70 -355.92 -1.32 -0.98 16 3 N -0.26 -0.69 11.67 -48.18 -0.56 -1.26 16 4 C -0.04 -0.22 7.13 42.45 0.30 0.08 16 5 C 0.61 4.47 7.82 86.75 0.68 5.15 16 6 O -0.57 -8.09 16.54 -3.94 -0.07 -8.16 16 7 N -0.69 -0.30 5.27 -443.03 -2.33 -2.63 16 8 C 0.11 -0.26 4.30 45.52 0.20 -0.07 16 9 H 0.09 0.10 7.50 -2.39 -0.02 0.08 16 10 C -0.12 0.89 7.29 31.12 0.23 1.12 16 11 C -0.07 0.48 3.86 -11.02 -0.04 0.44 16 12 H 0.11 -0.83 8.09 -2.39 -0.02 -0.85 16 13 C -0.07 0.44 5.28 -19.91 -0.11 0.33 16 14 C -0.07 0.24 9.41 22.54 0.21 0.45 16 15 C -0.05 0.04 5.73 -21.36 -0.12 -0.08 16 16 C 0.28 1.46 15.33 88.32 1.35 2.82 16 17 N -0.47 -5.52 18.54 19.01 0.35 -5.17 16 18 C -0.08 0.32 9.76 22.54 0.22 0.54 16 19 C -0.12 0.84 10.03 22.23 0.22 1.07 16 20 C -0.08 0.63 8.61 22.33 0.19 0.82 16 21 C -0.14 0.70 7.26 31.12 0.23 0.93 16 22 C -0.20 -0.84 9.35 22.41 0.21 -0.63 16 23 C -0.01 0.01 6.18 41.41 0.26 0.26 16 24 C -0.03 0.17 2.87 71.24 0.20 0.38 16 25 O -0.54 4.27 10.40 -148.98 -1.55 2.72 16 26 Si 0.79 -3.29 31.37 68.60 2.15 -1.14 16 27 H 0.11 -1.40 8.14 -2.39 -0.02 -1.42 16 28 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 29 H 0.11 -1.10 6.77 -2.39 -0.02 -1.12 16 30 H 0.42 -1.19 8.43 -92.71 -0.78 -1.97 16 31 H 0.11 -1.03 7.72 -2.39 -0.02 -1.05 16 32 H 0.08 -0.59 8.14 -2.38 -0.02 -0.61 16 33 H 0.14 -0.73 8.05 -2.91 -0.02 -0.75 16 34 H 0.14 -0.87 8.06 -2.91 -0.02 -0.89 16 35 H 0.16 -1.80 8.06 -2.91 -0.02 -1.82 16 36 H 0.15 -1.72 6.65 -2.91 -0.02 -1.74 16 37 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 38 H 0.11 -0.83 6.31 -2.38 -0.02 -0.85 16 39 H 0.16 0.76 6.84 -2.91 -0.02 0.74 16 40 H 0.13 -0.63 7.96 -2.39 -0.02 -0.65 16 41 H 0.40 -5.95 8.70 -74.05 -0.64 -6.60 16 42 H -0.28 -0.43 7.11 99.48 0.71 0.27 16 43 H -0.29 -0.80 6.83 99.48 0.68 -0.12 16 Total: 0.00 -24.75 373.48 1.87 -22.88 By element: Atomic # 1 Polarization: -20.16 SS G_CDS: -0.33 Total: -20.49 kcal Atomic # 6 Polarization: 8.70 SS G_CDS: 5.52 Total: 14.22 kcal Atomic # 7 Polarization: -6.18 SS G_CDS: -3.86 Total: -10.04 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -1.62 Total: -5.44 kcal Atomic # 14 Polarization: -3.29 SS G_CDS: 2.15 Total: -1.14 kcal Total: -24.75 1.87 -22.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14329782_13259642.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 125.460 kcal (2) G-P(sol) polarization free energy of solvation -24.750 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 100.710 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.880 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.581 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds