Wall clock time and date at job start Thu Mar 4 2021 13:38:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47007 * 2 1 4 4 C 1.50692 * 109.47392 * 239.99429 * 2 1 3 5 5 C 1.35011 * 126.42787 * 149.95108 * 4 2 1 6 6 N 1.33586 * 108.65744 * 180.02562 * 5 4 2 7 7 C 1.32418 * 109.22149 * 359.97438 * 6 5 4 8 8 C 1.41248 * 132.11597 * 180.02562 * 7 6 5 9 9 Br 1.89098 * 120.25576 * 359.97438 * 8 7 6 10 10 C 1.35703 * 119.48965 * 179.68824 * 8 7 6 11 11 C 1.41770 * 119.53261 * 0.58128 * 10 8 7 12 12 C 1.47572 * 120.01109 * 179.71304 * 11 10 8 13 13 O 1.21593 * 119.99965 * 179.72524 * 12 11 10 14 14 N 1.34777 * 120.00024 * 359.45065 * 12 11 10 15 15 C 1.46499 * 120.00195 * 180.27878 * 14 12 11 16 16 C 1.52990 * 109.47304 * 179.97438 * 15 14 12 17 17 C 1.53009 * 109.47205 * 179.97438 * 16 15 14 18 18 H 1.09000 * 112.84372 * 314.66462 * 17 16 15 19 19 C 1.53775 * 113.61360 * 85.86185 * 17 16 15 20 20 C 1.53955 * 87.02104 * 139.95204 * 19 17 16 21 21 H 1.09000 * 113.66728 * 220.06659 * 20 19 17 22 22 F 1.39902 * 113.61379 * 89.19561 * 20 19 17 23 23 C 1.53779 * 87.10985 * 334.63747 * 20 19 17 24 24 C 1.36498 * 119.97379 * 359.43503 * 11 10 8 25 25 N 1.35941 * 120.51158 * 0.25763 * 24 11 10 26 26 H 0.96696 * 114.00789 * 300.00793 * 1 2 3 27 27 H 1.09002 * 109.46907 * 119.99389 * 2 1 3 28 28 H 1.48500 * 109.99830 * 178.67814 * 3 2 1 29 29 H 1.48503 * 109.99896 * 299.99105 * 3 2 1 30 30 H 1.08003 * 125.67437 * 0.02562 * 5 4 2 31 31 H 1.08002 * 120.23904 * 180.31514 * 10 8 7 32 32 H 0.97000 * 119.99736 * 0.27150 * 14 12 11 33 33 H 1.08998 * 109.46795 * 299.99885 * 15 14 12 34 34 H 1.09002 * 109.47196 * 59.99076 * 15 14 12 35 35 H 1.09006 * 109.47037 * 299.99466 * 16 15 14 36 36 H 1.08997 * 109.47401 * 59.99831 * 16 15 14 37 37 H 1.09004 * 113.61388 * 254.53088 * 19 17 16 38 38 H 1.09006 * 113.61888 * 25.43204 * 19 17 16 39 39 H 1.09003 * 113.61037 * 270.81667 * 23 20 19 40 40 H 1.08996 * 113.69334 * 139.91941 * 23 20 19 41 41 H 1.08009 * 119.73948 * 180.27913 * 24 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 3.0851 -0.4606 -1.8854 6 7 3.1763 -1.2957 -2.9241 7 6 2.1072 -2.0767 -2.9507 8 6 1.7133 -3.1138 -3.8249 9 35 2.8131 -3.5986 -5.2848 10 6 0.5423 -3.7636 -3.6057 11 6 -0.2734 -3.3835 -2.5102 12 6 -1.5519 -4.0788 -2.2657 13 8 -2.2489 -3.7559 -1.3232 14 7 -1.9495 -5.0679 -3.0904 15 6 -3.2216 -5.7540 -2.8512 16 6 -3.4330 -6.8247 -3.9234 17 6 -4.7614 -7.5417 -3.6732 18 1 -4.9064 -7.8110 -2.6270 19 6 -5.9725 -6.8312 -4.3002 20 6 -6.4946 -8.2290 -4.6793 21 1 -6.9476 -8.2731 -5.6697 22 9 -7.2913 -8.8167 -3.6908 23 6 -5.0305 -8.6984 -4.6501 24 6 0.1270 -2.3780 -1.6785 25 7 1.3030 -1.7310 -1.8940 26 1 -0.3934 0.4418 0.7649 27 1 1.7923 -0.5138 0.8901 28 1 3.5345 1.7703 0.0322 29 1 1.5616 2.4678 -1.2086 30 1 3.8134 0.2896 -1.6147 31 1 0.2318 -4.5619 -4.2635 32 1 -1.3934 -5.3254 -3.8423 33 1 -3.2020 -6.2231 -1.8676 34 1 -4.0373 -5.0321 -2.8932 35 1 -3.4528 -6.3551 -4.9069 36 1 -2.6175 -7.5466 -3.8817 37 1 -6.5984 -6.3124 -3.5741 38 1 -5.7183 -6.2119 -5.1605 39 1 -4.5183 -8.5906 -5.6062 40 1 -4.8956 -9.6849 -4.2065 41 1 -0.4953 -2.0945 -0.8424 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14412250_12335884.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:38:40 Heat of formation + Delta-G solvation = 6.466259 kcal Electronic energy + Delta-G solvation = -27938.126066 eV Core-core repulsion = 23589.637952 eV Total energy + Delta-G solvation = -4348.488114 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.043 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -48.65415 -44.37175 -41.22240 -39.41240 -38.52717 -37.91909 -36.34369 -35.38686 -33.03417 -32.09979 -31.41717 -30.32342 -27.01133 -26.85817 -26.56935 -24.88571 -24.19709 -22.83877 -22.57035 -21.88568 -20.42261 -19.26533 -18.84375 -18.62214 -17.99089 -17.51177 -17.37605 -16.95849 -16.79436 -16.55337 -16.21886 -16.04253 -15.93100 -15.60125 -15.50481 -15.39623 -15.06844 -14.65969 -14.56667 -14.21887 -13.79811 -13.51877 -13.41181 -13.35030 -13.14884 -13.06011 -12.83336 -12.51441 -12.10339 -11.96796 -11.80346 -11.69657 -11.56998 -11.42302 -11.38251 -11.16969 -10.95521 -10.77837 -10.32705 -10.07942 -9.15590 -5.00776 -0.97358 -0.45909 0.11601 0.89012 1.06947 1.38758 1.62981 1.67413 1.93365 2.01202 2.16787 2.67517 2.96126 3.13017 3.29683 3.30873 3.35052 3.38358 3.48841 3.62874 3.74025 3.81693 3.89120 3.97247 4.14286 4.23476 4.27059 4.28602 4.38140 4.43618 4.46638 4.62126 4.75421 4.76748 4.84898 4.88198 4.95204 5.05166 5.08538 5.12309 5.20722 5.28375 5.46948 5.52291 6.28213 6.31126 6.73173 6.94456 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.052 4.052 3 Si 0.822 3.178 4 C -0.045 4.045 5 C 0.017 3.983 6 N -0.494 5.494 7 C 0.224 3.776 8 C -0.085 4.085 9 Br 0.009 6.991 10 C -0.018 4.018 11 C -0.173 4.173 12 C 0.578 3.422 13 O -0.566 6.566 14 N -0.705 5.705 15 C 0.119 3.881 16 C -0.111 4.111 17 C -0.107 4.107 18 H 0.084 0.916 19 C -0.157 4.157 20 C 0.042 3.958 21 H 0.111 0.889 22 F -0.222 7.222 23 C -0.149 4.149 24 C 0.168 3.832 25 N -0.358 5.358 26 H 0.415 0.585 27 H 0.109 0.891 28 H -0.271 1.271 29 H -0.309 1.309 30 H 0.201 0.799 31 H 0.192 0.808 32 H 0.417 0.583 33 H 0.061 0.939 34 H 0.064 0.936 35 H 0.093 0.907 36 H 0.088 0.912 37 H 0.068 0.932 38 H 0.120 0.880 39 H 0.122 0.878 40 H 0.073 0.927 41 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.276 -0.339 0.720 1.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.382 6.382 2 C -0.161 4.161 3 Si 0.725 3.275 4 C -0.156 4.156 5 C -0.133 4.133 6 N -0.213 5.213 7 C -0.021 4.021 8 C -0.168 4.168 9 Br 0.094 6.906 10 C -0.043 4.043 11 C -0.180 4.180 12 C 0.364 3.636 13 O -0.446 6.446 14 N -0.357 5.357 15 C -0.004 4.004 16 C -0.148 4.148 17 C -0.126 4.126 18 H 0.102 0.898 19 C -0.195 4.195 20 C 0.006 3.994 21 H 0.128 0.872 22 F -0.203 7.203 23 C -0.187 4.187 24 C 0.042 3.958 25 N -0.030 5.030 26 H 0.269 0.731 27 H 0.127 0.873 28 H -0.198 1.198 29 H -0.237 1.237 30 H 0.218 0.782 31 H 0.209 0.791 32 H 0.255 0.745 33 H 0.079 0.921 34 H 0.083 0.917 35 H 0.112 0.888 36 H 0.106 0.894 37 H 0.087 0.913 38 H 0.138 0.862 39 H 0.141 0.859 40 H 0.092 0.908 41 H 0.212 0.788 Dipole moment (debyes) X Y Z Total from point charges -0.152 -0.021 -0.596 0.616 hybrid contribution -0.604 -0.480 0.490 0.914 sum -0.756 -0.501 -0.106 0.913 Atomic orbital electron populations 1.86324 1.16789 1.82731 1.52355 1.24726 0.86290 1.11469 0.93566 0.94093 0.77885 0.71248 0.84315 1.21680 0.96776 0.95251 1.01895 1.22671 0.97273 1.00760 0.92552 1.70783 1.20554 1.08135 1.21856 1.20787 0.89879 1.00012 0.91454 1.20581 0.98881 0.99231 0.98067 1.96828 1.66783 1.90440 1.36555 1.21421 0.89818 0.97801 0.95309 1.19324 0.98497 1.01012 0.99212 1.17496 0.83913 0.79950 0.82271 1.90842 1.56013 1.66215 1.31523 1.45724 1.23628 1.35501 1.30860 1.21472 0.84257 0.94827 0.99828 1.21724 0.97463 0.96803 0.98826 1.22458 0.94392 0.96233 0.99546 0.89798 1.23753 0.97487 0.95595 1.02616 1.22783 0.91210 0.95260 0.90142 0.87169 1.92775 1.76224 1.85754 1.65544 1.23613 0.94043 0.99051 1.01954 1.22293 0.84627 0.89700 0.99178 1.42723 1.15231 1.24082 1.21007 0.73127 0.87299 1.19767 1.23671 0.78213 0.79146 0.74494 0.92067 0.91738 0.88803 0.89355 0.91289 0.86214 0.85928 0.90801 0.78845 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 1.81 10.88 -148.98 -1.62 0.19 16 2 C -0.05 0.15 3.05 71.23 0.22 0.36 16 3 Si 0.82 -4.17 31.28 68.60 2.15 -2.02 16 4 C -0.04 -0.26 6.28 41.01 0.26 0.00 16 5 C 0.02 0.13 10.44 83.68 0.87 1.00 16 6 N -0.49 -6.11 11.30 -194.09 -2.19 -8.31 16 7 C 0.22 2.18 7.59 134.18 1.02 3.19 16 8 C -0.09 -0.39 6.24 22.42 0.14 -0.25 16 9 Br 0.01 0.03 33.72 -20.37 -0.69 -0.66 16 10 C -0.02 0.02 9.26 22.56 0.21 0.23 16 11 C -0.17 -0.27 5.84 -20.35 -0.12 -0.39 16 12 C 0.58 1.24 7.76 86.71 0.67 1.91 16 13 O -0.57 -5.61 16.27 -4.01 -0.07 -5.67 16 14 N -0.70 3.48 5.51 -466.25 -2.57 0.91 16 15 C 0.12 -0.55 5.67 86.38 0.49 -0.06 16 16 C -0.11 1.09 5.15 30.59 0.16 1.25 16 17 C -0.11 0.66 3.62 -10.27 -0.04 0.62 16 18 H 0.08 -0.25 8.14 -2.39 -0.02 -0.26 16 19 C -0.16 0.85 7.54 31.18 0.24 1.09 16 20 C 0.04 -0.12 5.69 31.18 0.18 0.06 16 21 H 0.11 -0.68 8.14 -2.39 -0.02 -0.69 16 22 F -0.22 -1.20 17.38 44.97 0.78 -0.41 16 23 C -0.15 0.97 7.54 31.12 0.23 1.21 16 24 C 0.17 0.81 9.91 83.65 0.83 1.64 16 25 N -0.36 -2.69 2.93 -337.71 -0.99 -3.68 16 26 H 0.42 -5.79 8.74 -74.06 -0.65 -6.44 16 27 H 0.11 -0.81 7.96 -2.39 -0.02 -0.83 16 28 H -0.27 0.41 6.91 99.48 0.69 1.10 16 29 H -0.31 -1.47 7.11 99.48 0.71 -0.77 16 30 H 0.20 0.62 6.77 -2.91 -0.02 0.60 16 31 H 0.19 -1.90 6.44 -2.91 -0.02 -1.92 16 32 H 0.42 -4.74 6.51 -92.71 -0.60 -5.35 16 33 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 35 H 0.09 -1.20 7.88 -2.38 -0.02 -1.22 16 36 H 0.09 -1.02 8.14 -2.39 -0.02 -1.03 16 37 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 38 H 0.12 -1.13 7.92 -2.38 -0.02 -1.14 16 39 H 0.12 -1.34 8.10 -2.39 -0.02 -1.36 16 40 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 41 H 0.19 0.86 6.19 -2.91 -0.02 0.84 16 Total: 0.00 -27.13 368.37 0.03 -27.09 By element: Atomic # 1 Polarization: -19.17 SS G_CDS: -0.12 Total: -19.29 kcal Atomic # 6 Polarization: 6.50 SS G_CDS: 5.36 Total: 11.85 kcal Atomic # 7 Polarization: -5.32 SS G_CDS: -5.75 Total: -11.08 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -1.69 Total: -5.49 kcal Atomic # 9 Polarization: -1.20 SS G_CDS: 0.78 Total: -0.41 kcal Atomic # 14 Polarization: -4.17 SS G_CDS: 2.15 Total: -2.02 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -0.69 Total: -0.66 kcal Total: -27.13 0.03 -27.09 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14412250_12335884.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.560 kcal (2) G-P(sol) polarization free energy of solvation -27.127 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.033 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.094 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.466 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds