Wall clock time and date at job start Thu Mar 4 2021 13:38:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 N 1.28466 * 124.87981 * 2 1 4 4 C 1.31812 * 110.07026 * 180.29034 * 3 2 1 5 5 C 1.47708 * 126.51810 * 179.71680 * 4 3 2 6 6 O 1.21578 * 119.99627 * 179.97438 * 5 4 3 7 7 N 1.34770 * 120.00264 * 0.02562 * 5 4 3 8 8 C 1.46504 * 120.00174 * 179.97438 * 7 5 4 9 9 C 1.53000 * 109.46957 * 179.97438 * 8 7 5 10 10 C 1.53000 * 109.47125 * 180.02562 * 9 8 7 11 11 H 1.09007 * 112.84651 * 43.79900 * 10 9 8 12 12 C 1.53781 * 113.61868 * 174.99661 * 10 9 8 13 13 C 1.53785 * 87.07751 * 139.98234 * 12 10 9 14 14 H 1.09006 * 113.60664 * 220.02203 * 13 12 10 15 15 F 1.39898 * 113.61480 * 89.12052 * 13 12 10 16 16 C 1.53777 * 87.08311 * 334.56686 * 13 12 10 17 17 C 1.41498 * 106.95912 * 359.72091 * 4 3 2 18 18 C 1.35028 * 124.88306 * 179.80468 * 2 1 3 19 19 C 1.50699 * 126.38987 * 359.97438 * 18 2 1 20 20 O 1.42907 * 109.46603 * 29.71491 * 19 18 2 21 21 Si 1.86298 * 109.47032 * 149.70795 * 19 18 2 22 22 H 1.08997 * 109.47730 * 270.19179 * 1 2 3 23 23 H 1.09001 * 109.47411 * 30.19449 * 1 2 3 24 24 H 1.08999 * 109.47166 * 150.18767 * 1 2 3 25 25 H 0.97001 * 119.99938 * 0.02562 * 7 5 4 26 26 H 1.08993 * 109.47159 * 300.00024 * 8 7 5 27 27 H 1.09003 * 109.46919 * 59.99973 * 8 7 5 28 28 H 1.09006 * 109.46946 * 299.99868 * 9 8 7 29 29 H 1.08993 * 109.47344 * 60.00171 * 9 8 7 30 30 H 1.08999 * 113.61444 * 254.52844 * 12 10 9 31 31 H 1.09001 * 113.60972 * 25.43728 * 12 10 9 32 32 H 1.08996 * 113.62089 * 270.88386 * 16 13 12 33 33 H 1.09000 * 113.60913 * 139.98097 * 16 13 12 34 34 H 1.08005 * 127.24435 * 180.02562 * 17 4 3 35 35 H 1.08996 * 109.47117 * 269.71404 * 19 18 2 36 36 H 0.96697 * 114.00527 * 59.99993 * 20 19 18 37 37 H 1.48506 * 109.99834 * 58.68765 * 21 19 18 38 38 H 1.48502 * 110.00011 * 180.02562 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7170 -0.0063 5 6 4.6272 1.6399 -0.0143 6 8 5.7596 1.1977 -0.0191 7 7 4.4240 2.9722 -0.0151 8 6 5.5678 3.8877 -0.0225 9 6 5.0646 5.3326 -0.0226 10 6 6.2590 6.2886 -0.0309 11 1 7.0388 5.9857 -0.7298 12 6 5.8623 7.7692 -0.1546 13 6 6.9689 8.0699 0.8701 14 1 6.6909 8.8269 1.6034 15 9 8.2200 8.3067 0.2905 16 6 6.7859 6.6284 1.3733 17 6 3.5271 -0.6970 -0.0040 18 6 2.2373 -1.1077 0.0038 19 6 1.7534 -2.5349 0.0092 20 8 0.4920 -2.6126 -0.6579 21 14 2.9901 -3.6131 -0.8733 22 1 -0.3634 0.0034 1.0276 23 1 -0.3634 0.8882 -0.5168 24 1 -0.3633 -0.8917 -0.5109 25 1 3.5204 3.3251 -0.0102 26 1 6.1772 3.7149 0.8645 27 1 6.1678 3.7122 -0.9154 28 1 4.4554 5.5050 -0.9100 29 1 4.4643 5.5083 0.8700 30 1 6.0540 8.1917 -1.1409 31 1 4.8583 7.9842 0.2114 32 1 6.0345 6.5314 2.1568 33 1 7.7233 6.1299 1.6203 34 1 4.4108 -1.3180 -0.0073 35 1 1.6420 -2.8768 1.0381 36 1 0.5163 -2.3231 -1.5802 37 1 4.3143 -3.5163 -0.2081 38 1 2.5242 -5.0232 -0.8754 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14412250_13259642.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:38:44 Heat of formation + Delta-G solvation = -12.637437 kcal Electronic energy + Delta-G solvation = -21801.377439 eV Core-core repulsion = 18176.557351 eV Total energy + Delta-G solvation = -3624.820088 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.132 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -48.66744 -43.87755 -40.63113 -39.34377 -38.11584 -36.16858 -34.43108 -32.80642 -31.71144 -28.62981 -26.99494 -26.78433 -25.94816 -23.98050 -22.76760 -22.25479 -21.04905 -20.37713 -19.16114 -17.66876 -17.59091 -17.21928 -17.18067 -16.91777 -16.69412 -16.48533 -15.97274 -15.84779 -15.73800 -15.39906 -15.13066 -14.92953 -14.54593 -14.01317 -13.82215 -13.62400 -13.46418 -13.44226 -13.09923 -12.60261 -12.55848 -12.34281 -11.99172 -11.87559 -11.81236 -11.46023 -11.18162 -10.96466 -10.87409 -10.38350 -10.05020 -9.98918 -4.97595 0.40237 0.77488 1.17730 1.54206 1.70399 1.96711 2.09531 2.25169 3.11693 3.28835 3.31007 3.32010 3.35856 3.61292 3.71813 3.86930 3.98133 4.13599 4.25189 4.31101 4.33313 4.38556 4.44337 4.50482 4.58058 4.59685 4.73359 4.74630 4.79667 4.83033 4.93050 5.02983 5.11435 5.17179 5.18512 5.33432 5.50153 5.65810 6.33869 6.52393 6.79144 7.07184 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.257 5.257 3 N -0.260 5.260 4 C -0.038 4.038 5 C 0.600 3.400 6 O -0.573 6.573 7 N -0.705 5.705 8 C 0.118 3.882 9 C -0.107 4.107 10 C -0.108 4.108 11 H 0.085 0.915 12 C -0.148 4.148 13 C 0.045 3.955 14 H 0.113 0.887 15 F -0.221 7.221 16 C -0.158 4.158 17 C -0.199 4.199 18 C -0.006 4.006 19 C -0.034 4.034 20 O -0.541 6.541 21 Si 0.790 3.210 22 H 0.089 0.911 23 H 0.107 0.893 24 H 0.139 0.861 25 H 0.417 0.583 26 H 0.061 0.939 27 H 0.059 0.941 28 H 0.085 0.915 29 H 0.089 0.911 30 H 0.075 0.925 31 H 0.122 0.878 32 H 0.118 0.882 33 H 0.068 0.932 34 H 0.159 0.841 35 H 0.128 0.872 36 H 0.400 0.600 37 H -0.293 1.293 38 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.440 0.941 -1.667 8.655 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.047 5.047 3 N -0.098 5.098 4 C -0.196 4.196 5 C 0.385 3.615 6 O -0.451 6.451 7 N -0.357 5.357 8 C -0.005 4.005 9 C -0.145 4.145 10 C -0.127 4.127 11 H 0.103 0.897 12 C -0.186 4.186 13 C 0.009 3.991 14 H 0.131 0.869 15 F -0.202 7.202 16 C -0.195 4.195 17 C -0.227 4.227 18 C -0.132 4.132 19 C -0.145 4.145 20 O -0.349 6.349 21 Si 0.693 3.307 22 H 0.107 0.893 23 H 0.125 0.875 24 H 0.156 0.844 25 H 0.254 0.746 26 H 0.079 0.921 27 H 0.078 0.922 28 H 0.104 0.896 29 H 0.107 0.893 30 H 0.094 0.906 31 H 0.140 0.860 32 H 0.136 0.864 33 H 0.087 0.913 34 H 0.177 0.823 35 H 0.145 0.855 36 H 0.252 0.748 37 H -0.220 1.220 38 H -0.206 1.206 Dipole moment (debyes) X Y Z Total from point charges -8.106 0.708 -1.059 8.206 hybrid contribution 0.499 -0.189 0.663 0.851 sum -7.608 0.519 -0.396 7.635 Atomic orbital electron populations 1.22980 0.70302 1.08300 1.06024 1.45748 1.09094 1.01588 1.48226 1.73462 1.02408 1.14799 1.19123 1.21723 0.91017 0.94156 1.12720 1.17099 0.86336 0.82316 0.75728 1.90793 1.24164 1.77937 1.52188 1.45784 1.11545 1.04669 1.73692 1.21465 0.88039 0.89077 1.01893 1.21685 0.97675 0.90675 1.04431 1.22475 0.97899 0.94869 0.97487 0.89712 1.23614 0.99690 0.95333 0.99917 1.22715 0.79643 0.99563 0.97169 0.86939 1.92775 1.45078 1.95807 1.86534 1.23727 1.03084 0.94586 0.98152 1.21624 0.97356 0.93806 1.09887 1.22083 0.90552 0.92345 1.08190 1.24810 0.94367 0.92013 1.03299 1.86450 1.28807 1.88680 1.30939 0.93160 0.73413 0.75551 0.88553 0.89295 0.87490 0.84367 0.74634 0.92106 0.92214 0.89645 0.89255 0.90612 0.85992 0.86351 0.91289 0.82313 0.85481 0.74849 1.21957 1.20630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.51 11.00 127.77 1.41 0.90 16 2 N -0.26 0.10 3.70 -355.93 -1.32 -1.21 16 3 N -0.26 -1.03 11.67 -48.18 -0.56 -1.59 16 4 C -0.04 -0.29 7.13 42.45 0.30 0.01 16 5 C 0.60 5.99 7.82 86.75 0.68 6.66 16 6 O -0.57 -9.99 16.93 -3.96 -0.07 -10.06 16 7 N -0.71 -2.08 5.55 -466.10 -2.59 -4.67 16 8 C 0.12 0.14 5.67 86.38 0.49 0.63 16 9 C -0.11 0.55 5.16 30.59 0.16 0.71 16 10 C -0.11 0.32 3.63 -10.27 -0.04 0.29 16 11 H 0.08 0.00 8.13 -2.38 -0.02 -0.02 16 12 C -0.15 0.64 7.54 31.12 0.23 0.87 16 13 C 0.05 -0.05 5.69 31.12 0.18 0.13 16 14 H 0.11 -0.53 8.14 -2.38 -0.02 -0.55 16 15 F -0.22 -1.52 17.38 44.97 0.78 -0.73 16 16 C -0.16 0.44 7.53 31.12 0.23 0.67 16 17 C -0.20 -1.11 9.35 22.41 0.21 -0.90 16 18 C -0.01 0.00 6.18 41.40 0.26 0.26 16 19 C -0.03 0.16 2.99 71.24 0.21 0.37 16 20 O -0.54 4.36 10.02 -148.98 -1.49 2.87 16 21 Si 0.79 -3.01 31.37 68.60 2.15 -0.86 16 22 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 23 H 0.11 -1.11 8.14 -2.39 -0.02 -1.13 16 24 H 0.14 -1.63 4.99 -2.39 -0.01 -1.64 16 25 H 0.42 -0.57 8.20 -92.71 -0.76 -1.33 16 26 H 0.06 0.21 8.14 -2.39 -0.02 0.20 16 27 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 28 H 0.08 -0.56 8.14 -2.38 -0.02 -0.58 16 29 H 0.09 -0.68 7.84 -2.39 -0.02 -0.70 16 30 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.12 -1.05 8.10 -2.39 -0.02 -1.07 16 32 H 0.12 -0.78 7.90 -2.39 -0.02 -0.79 16 33 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 34 H 0.16 0.98 6.84 -2.91 -0.02 0.96 16 35 H 0.13 -0.58 7.96 -2.39 -0.02 -0.60 16 36 H 0.40 -6.22 8.37 -74.06 -0.62 -6.84 16 37 H -0.29 -1.03 6.83 99.48 0.68 -0.35 16 38 H -0.28 -0.44 7.11 99.48 0.71 0.27 16 Total: 0.00 -21.58 323.70 0.95 -20.63 By element: Atomic # 1 Polarization: -14.70 SS G_CDS: -0.28 Total: -14.97 kcal Atomic # 6 Polarization: 6.27 SS G_CDS: 4.32 Total: 10.59 kcal Atomic # 7 Polarization: -3.00 SS G_CDS: -4.47 Total: -7.47 kcal Atomic # 8 Polarization: -5.63 SS G_CDS: -1.56 Total: -7.19 kcal Atomic # 9 Polarization: -1.52 SS G_CDS: 0.78 Total: -0.73 kcal Atomic # 14 Polarization: -3.01 SS G_CDS: 2.15 Total: -0.86 kcal Total: -21.58 0.95 -20.63 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14412250_13259642.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.993 kcal (2) G-P(sol) polarization free energy of solvation -21.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.590 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.953 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.630 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.637 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds