Wall clock time and date at job start Thu Mar 4 2021 14:41:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46499 * 119.99541 * 2 1 4 4 C 1.50707 * 109.47264 * 89.99618 * 3 2 1 5 5 C 1.38211 * 119.99848 * 270.27262 * 4 3 2 6 6 C 1.38258 * 119.99530 * 179.97438 * 5 4 3 7 7 C 1.38214 * 120.00196 * 359.97438 * 6 5 4 8 8 C 1.38254 * 120.00047 * 359.97432 * 7 6 5 9 Xx 1.81002 * 120.00168 * 179.97438 * 8 7 6 10 9 F 7.25613 * 136.05542 * 81.64266 * 2 1 3 11 10 F 1.61007 * 89.99977 * 315.00481 * 9 8 7 12 11 F 1.60996 * 89.99866 * 135.00022 * 9 8 7 13 12 F 1.61008 * 89.99784 * 45.00250 * 9 8 7 14 13 F 1.60994 * 90.00136 * 225.00284 * 9 8 7 15 14 C 1.38213 * 119.99852 * 359.81894 * 8 7 6 16 15 C 1.34770 * 120.00180 * 179.97438 * 2 1 3 17 16 O 1.21589 * 119.99757 * 185.01539 * 16 2 1 18 17 C 1.47577 * 120.00384 * 5.01816 * 16 2 1 19 18 C 1.36499 * 120.00726 * 79.13977 * 18 16 2 20 19 N 1.35948 * 120.50205 * 180.02562 * 19 18 16 21 20 C 1.36997 * 132.41025 * 179.97438 * 20 19 18 22 21 C 1.50705 * 126.43120 * 0.02562 * 21 20 19 23 22 O 1.42898 * 109.46948 * 29.99967 * 22 21 20 24 23 Si 1.86301 * 109.47233 * 149.99600 * 22 21 20 25 24 H 1.48504 * 109.46984 * 60.00083 * 24 22 21 26 25 H 1.48496 * 109.47042 * 179.97438 * 24 22 21 27 26 H 1.48498 * 109.47279 * 300.00617 * 24 22 21 28 27 C 1.35006 * 107.14414 * 180.02562 * 21 20 19 29 28 N 1.33586 * 108.65226 * 359.97438 * 28 21 20 30 29 C 1.32415 * 109.22357 * 0.02562 * 29 28 21 31 30 C 1.41250 * 132.11526 * 179.97438 * 30 29 28 32 31 Br 1.89103 * 120.25671 * 0.04328 * 31 30 29 33 32 C 1.35706 * 119.48939 * 179.71200 * 31 30 29 34 33 H 1.09005 * 109.46854 * 85.99544 * 1 2 3 35 34 H 1.09007 * 109.47179 * 205.98853 * 1 2 3 36 35 H 1.08998 * 109.47482 * 325.99369 * 1 2 3 37 36 H 1.08997 * 109.46850 * 209.99524 * 3 2 1 38 37 H 1.08998 * 109.47520 * 329.99855 * 3 2 1 39 38 H 1.07989 * 120.00268 * 359.97438 * 5 4 3 40 39 H 1.08002 * 119.99960 * 179.97438 * 6 5 4 41 40 H 1.08005 * 119.99990 * 179.97438 * 7 6 5 42 41 H 1.07999 * 119.99606 * 180.02562 * 15 8 7 43 42 H 1.08000 * 119.74621 * 0.02562 * 19 18 16 44 43 H 1.09001 * 109.47109 * 269.99902 * 22 21 20 45 44 H 0.96700 * 114.00662 * 59.99777 * 23 22 21 46 45 H 1.07995 * 125.67703 * 179.97438 * 28 21 20 47 46 H 1.07996 * 120.23397 * 179.97438 * 33 31 30 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.4485 1.7039 1.4209 5 6 1.5243 2.4972 2.0742 6 6 1.7544 2.8959 3.3779 7 6 2.9084 2.5008 4.0279 8 6 3.8324 1.7064 3.3747 9 9 6.6895 0.7319 4.9820 10 9 5.5467 2.6890 4.7761 11 9 5.1410 -0.3098 3.6755 12 9 4.4817 0.8254 5.5358 13 9 6.2060 1.5537 2.9158 14 6 3.6003 1.3043 2.0729 15 6 2.1389 -1.1671 0.0005 16 8 3.3513 -1.1690 0.0926 17 6 1.4054 -2.4429 -0.1107 18 6 0.9615 -2.8712 -1.3284 19 7 0.2843 -4.0445 -1.4423 20 6 -0.2613 -4.6958 -2.5170 21 6 -0.2403 -4.2307 -3.9504 22 8 0.9371 -3.4549 -4.1822 23 14 -0.2423 -5.7098 -5.0832 24 1 -1.4658 -6.5161 -4.8423 25 1 -0.2222 -5.2515 -6.4955 26 1 0.9588 -6.5406 -4.8146 27 6 -0.8213 -5.8324 -2.0512 28 7 -0.6325 -5.8914 -0.7300 29 6 0.0357 -4.8180 -0.3367 30 6 0.4857 -4.3951 0.9336 31 35 0.1497 -5.4533 2.4644 32 6 1.1670 -3.2268 1.0461 33 1 -0.3633 0.0718 -1.0252 34 1 -0.3634 -0.9238 0.4503 35 1 -0.3634 0.8519 0.5747 36 1 3.1498 1.1384 -0.5138 37 1 1.6083 2.0284 -0.5138 38 1 0.6225 2.8055 1.5664 39 1 1.0325 3.5161 3.8883 40 1 3.0884 2.8127 5.0462 41 1 4.3219 0.6834 1.5628 42 1 1.1497 -2.2734 -2.2079 43 1 -1.1219 -3.6209 -4.1474 44 1 1.7618 -3.9351 -4.0259 45 1 -1.3363 -6.5711 -2.6473 46 1 1.5162 -2.8918 2.0115 RHF calculation, no. of doubly occupied orbitals= 79 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14414422_12335884.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:41:58 Heat of formation + Delta-G solvation = 441.309811 kcal Electronic energy + Delta-G solvation = -43563.518443 eV Core-core repulsion = 37058.651159 eV Total energy + Delta-G solvation = -6504.867284 eV No. of doubly occupied orbitals = 79 Molecular weight (most abundant/longest-lived isotopes) = 497.029 amu Computer time = 46.12 seconds Orbital eigenvalues (eV) -44.39651 -44.28283 -44.25275 -44.17332 -44.10785 -43.59648 -41.73927 -40.73079 -38.55585 -37.98593 -36.95619 -35.30927 -33.75793 -32.51964 -32.32954 -31.78339 -30.36538 -28.61239 -27.35481 -26.88382 -25.22805 -24.08206 -23.86912 -22.96692 -22.43752 -20.84179 -19.38540 -18.80901 -18.33185 -18.03335 -17.71115 -17.65797 -17.31417 -16.98982 -16.69777 -16.33042 -15.97387 -15.85076 -15.69876 -15.57687 -15.19896 -15.16256 -15.12192 -15.02090 -14.77860 -14.69568 -14.56863 -14.40149 -14.35289 -14.18282 -14.16364 -13.99399 -13.90603 -13.83544 -13.71305 -13.62590 -13.49710 -13.44146 -13.37085 -13.30346 -13.12197 -12.86582 -12.73782 -12.65292 -12.28469 -12.12448 -12.05629 -11.91385 -11.61101 -11.49800 -11.47777 -11.33042 -11.23252 -10.85172 -10.75149 -10.63142 -10.02629 -9.97730 -9.07536 -5.28329 -4.83680 -3.05601 -0.82408 -0.68130 -0.49701 -0.28774 0.17824 0.88105 1.07903 1.39508 1.52612 1.54772 1.59755 1.72648 1.97732 2.00803 2.12912 2.69221 2.81603 2.97145 2.99066 3.13223 3.34041 3.42233 3.49586 3.49850 3.53055 3.67992 3.81878 3.90834 4.11615 4.22510 4.26096 4.32086 4.36449 4.42463 4.49013 4.52951 4.57417 4.66241 4.75243 4.80573 4.90610 4.96007 5.02285 5.17313 5.28162 5.28903 5.60908 5.99915 6.37932 6.52096 6.78645 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.594 5.594 3 C 0.151 3.849 4 C -0.053 4.053 5 C -0.058 4.058 6 C -0.036 4.036 7 C -0.116 4.116 8 C 0.318 3.682 9 F -0.217 7.217 10 F -0.158 7.158 11 F -0.166 7.166 12 F -0.163 7.163 13 F -0.167 7.167 14 C -0.113 4.113 15 C 0.577 3.423 16 O -0.548 6.548 17 C -0.154 4.154 18 C 0.142 3.858 19 N -0.350 5.350 20 C -0.077 4.077 21 C -0.037 4.037 22 O -0.548 6.548 23 Si 1.000 3.000 24 H -0.242 1.242 25 H -0.259 1.259 26 H -0.271 1.271 27 C 0.025 3.975 28 N -0.499 5.499 29 C 0.224 3.776 30 C -0.075 4.075 31 Br -0.006 7.006 32 C -0.026 4.026 33 H 0.084 0.916 34 H 0.064 0.936 35 H 0.117 0.883 36 H 0.093 0.907 37 H 0.170 0.830 38 H 0.225 0.775 39 H 0.228 0.772 40 H 0.183 0.817 41 H 0.159 0.841 42 H 0.208 0.792 43 H 0.150 0.850 44 H 0.389 0.611 45 H 0.206 0.794 46 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.267 10.298 -10.833 22.838 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.325 5.325 3 C 0.029 3.971 4 C -0.054 4.054 5 C -0.075 4.075 6 C -0.053 4.053 7 C -0.133 4.133 8 C 0.314 3.686 9 F -0.217 7.217 10 F -0.157 7.157 11 F -0.165 7.165 12 F -0.162 7.162 13 F -0.166 7.166 14 C -0.131 4.131 15 C 0.362 3.638 16 O -0.425 6.425 17 C -0.161 4.161 18 C 0.017 3.983 19 N -0.023 5.023 20 C -0.188 4.188 21 C -0.148 4.148 22 O -0.354 6.354 23 Si 0.821 3.179 24 H -0.165 1.165 25 H -0.182 1.182 26 H -0.195 1.195 27 C -0.125 4.125 28 N -0.218 5.218 29 C -0.021 4.021 30 C -0.158 4.158 31 Br 0.079 6.921 32 C -0.052 4.052 33 H 0.102 0.898 34 H 0.083 0.917 35 H 0.135 0.865 36 H 0.112 0.888 37 H 0.187 0.813 38 H 0.241 0.759 39 H 0.244 0.756 40 H 0.201 0.799 41 H 0.177 0.823 42 H 0.224 0.776 43 H 0.167 0.833 44 H 0.239 0.761 45 H 0.223 0.777 46 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -17.558 8.988 -10.535 22.361 hybrid contribution 2.841 -0.491 0.981 3.046 sum -14.717 8.496 -9.554 19.495 Atomic orbital electron populations 1.22309 0.75810 1.05203 1.04666 1.47908 1.08845 1.04046 1.71685 1.20905 1.00798 0.86002 0.89351 1.20800 0.88713 0.97741 0.98162 1.22426 0.99687 0.91553 0.93814 1.22211 0.90900 0.97805 0.94360 1.22468 0.89597 0.95668 1.05600 1.27940 0.53698 1.02737 0.84269 2.00000 1.84895 1.46129 1.90670 1.99920 1.97198 1.23716 1.94848 1.99922 1.72649 1.44023 1.99892 1.99921 1.58622 1.73094 1.84554 1.99919 1.90891 1.59122 1.66696 1.22043 1.00030 1.01503 0.89550 1.17806 0.86141 0.83598 0.76210 1.90926 1.14971 1.87184 1.49443 1.19167 1.05586 0.98551 0.92830 1.22194 0.90645 0.85582 0.99845 1.42637 1.35853 1.15452 1.08348 1.22398 1.08623 0.96815 0.90999 1.24848 0.92552 1.07456 0.89932 1.86442 1.15982 1.41972 1.91020 0.84987 0.81482 0.74145 0.77329 1.16478 1.18249 1.19550 1.22904 1.01540 0.97334 0.90707 1.70801 1.18226 1.19522 1.13294 1.20457 1.02563 0.90889 0.88193 1.20461 1.06779 0.98162 0.90362 1.96841 1.95023 1.69376 1.30834 1.21037 0.93404 0.90981 0.99787 0.89791 0.91743 0.86455 0.88823 0.81254 0.75883 0.75599 0.79942 0.82335 0.77569 0.83273 0.76136 0.77696 0.82314 Number of geometries 1 Number of calculations of the screened coulomb radii 6 The total number of SCF iterations 515. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -1.25 10.22 127.77 1.31 0.06 16 2 N -0.59 8.46 2.86 -854.87 -2.44 6.02 16 3 C 0.15 -2.64 5.51 85.64 0.47 -2.17 16 4 C -0.05 0.79 5.46 -19.86 -0.11 0.69 16 5 C -0.06 1.36 9.70 22.27 0.22 1.57 16 6 C -0.04 0.76 10.05 22.27 0.22 0.98 16 7 C -0.12 1.05 8.62 22.27 0.19 1.24 16 8 C 0.32 0.37 4.82 22.27 0.11 0.47 16 9 F -0.22 -6.43 16.66 44.97 0.75 -5.68 16 10 F -0.16 -2.73 15.31 44.97 0.69 -2.05 16 11 F -0.17 -3.53 15.31 44.97 0.69 -2.84 16 12 F -0.16 -2.91 15.32 44.97 0.69 -2.22 16 13 F -0.17 -3.37 15.31 44.97 0.69 -2.68 16 14 C -0.11 0.37 8.14 22.27 0.18 0.55 16 15 C 0.58 -2.68 7.04 86.71 0.61 -2.07 16 16 O -0.55 -2.63 15.93 -3.99 -0.06 -2.69 16 17 C -0.15 0.63 3.71 -20.35 -0.08 0.56 16 18 C 0.14 -0.82 10.00 83.65 0.84 0.02 16 19 N -0.35 0.49 2.93 -337.71 -0.99 -0.50 16 20 C -0.08 0.26 6.24 41.01 0.26 0.51 16 21 C -0.04 0.34 3.06 71.24 0.22 0.56 16 22 O -0.55 4.96 10.90 -148.98 -1.62 3.34 16 23 Si 1.00 -7.52 26.60 68.60 1.83 -5.70 16 24 H -0.24 1.84 6.84 99.48 0.68 2.52 16 25 H -0.26 1.28 7.11 99.48 0.71 1.99 16 26 H -0.27 0.97 7.11 99.48 0.71 1.67 16 27 C 0.02 0.01 10.44 83.68 0.87 0.88 16 28 N -0.50 -3.49 11.30 -194.11 -2.19 -5.69 16 29 C 0.22 0.99 7.59 134.19 1.02 2.01 16 30 C -0.08 -0.24 6.24 22.42 0.14 -0.10 16 31 Br -0.01 -0.03 33.72 -20.37 -0.69 -0.72 16 32 C -0.03 0.02 9.51 22.55 0.21 0.23 16 33 H 0.08 -1.87 8.14 -2.38 -0.02 -1.89 16 34 H 0.06 -1.06 6.81 -2.38 -0.02 -1.07 16 35 H 0.12 -3.22 8.10 -2.39 -0.02 -3.24 16 36 H 0.09 -1.18 7.44 -2.39 -0.02 -1.19 16 37 H 0.17 -4.67 8.02 -2.39 -0.02 -4.69 16 38 H 0.22 -7.63 8.06 -2.92 -0.02 -7.65 16 39 H 0.23 -6.70 8.06 -2.91 -0.02 -6.72 16 40 H 0.18 -1.56 7.40 -2.91 -0.02 -1.59 16 41 H 0.16 0.54 6.73 -2.91 -0.02 0.52 16 42 H 0.21 -2.19 6.69 -2.91 -0.02 -2.21 16 43 H 0.15 -1.96 7.96 -2.39 -0.02 -1.98 16 44 H 0.39 -4.83 8.70 -74.06 -0.64 -5.47 16 45 H 0.21 -0.96 6.72 -2.91 -0.02 -0.98 16 46 H 0.16 -0.32 8.06 -2.91 -0.02 -0.34 16 Total: 0.00 -52.93 436.46 5.20 -47.74 By element: Atomic # 1 Polarization: -33.52 SS G_CDS: 1.19 Total: -32.34 kcal Atomic # 6 Polarization: -0.67 SS G_CDS: 6.68 Total: 6.01 kcal Atomic # 7 Polarization: 5.46 SS G_CDS: -5.63 Total: -0.17 kcal Atomic # 8 Polarization: 2.33 SS G_CDS: -1.69 Total: 0.65 kcal Atomic # 9 Polarization: -18.98 SS G_CDS: 3.50 Total: -15.47 kcal Atomic # 14 Polarization: -7.52 SS G_CDS: 1.83 Total: -5.70 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -0.69 Total: -0.72 kcal Total: -52.93 5.20 -47.74 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14414422_12335884.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 489.047 kcal (2) G-P(sol) polarization free energy of solvation -52.934 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 436.113 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.197 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.737 kcal (6) G-S(sol) free energy of system = (1) + (5) 441.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 46.12 seconds