Wall clock time and date at job start Thu Mar 4 2021 15:57:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34227 * 117.00047 * 2 1 4 4 O 1.20824 * 120.00119 * 359.97438 * 3 2 1 5 5 C 1.50705 * 120.00045 * 180.02562 * 3 2 1 6 6 H 1.08997 * 109.46992 * 59.99213 * 5 3 2 7 7 C 1.52999 * 109.47364 * 179.97438 * 5 3 2 8 8 C 1.52995 * 109.47124 * 179.97438 * 7 5 3 9 9 C 1.52998 * 109.47577 * 299.99978 * 8 7 5 10 10 H 1.08998 * 109.47245 * 180.02562 * 9 8 7 11 11 N 1.46502 * 109.46671 * 300.00234 * 9 8 7 12 12 C 1.34777 * 119.99346 * 204.99838 * 11 9 8 13 13 O 1.21570 * 120.00492 * 359.97438 * 12 11 9 14 14 C 1.47716 * 119.99588 * 179.97438 * 12 11 9 15 15 N 1.31811 * 126.52038 * 0.02562 * 14 12 11 16 16 N 1.28464 * 110.07053 * 179.72017 * 15 14 12 17 17 C 1.46503 * 124.88042 * 180.30502 * 16 15 14 18 18 C 1.35027 * 110.23565 * 0.45601 * 16 15 14 19 19 C 1.50694 * 126.39043 * 179.81344 * 18 16 15 20 20 O 1.42901 * 109.47118 * 29.71283 * 19 18 16 21 21 Si 1.86298 * 109.47775 * 149.71528 * 19 18 16 22 22 C 1.35367 * 107.22888 * 359.55084 * 18 16 15 23 23 C 1.52999 * 109.46875 * 59.99870 * 9 8 7 24 24 C 1.53004 * 109.47381 * 299.99902 * 23 9 8 25 25 H 1.08996 * 109.46988 * 60.00082 * 1 2 3 26 26 H 1.08993 * 109.47177 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46993 * 300.00787 * 1 2 3 28 28 H 1.09003 * 109.46940 * 59.99362 * 7 5 3 29 29 H 1.09003 * 109.46515 * 299.99729 * 7 5 3 30 30 H 1.09000 * 109.46917 * 179.97438 * 8 7 5 31 31 H 1.09007 * 109.47059 * 60.00488 * 8 7 5 32 32 H 0.96994 * 120.00117 * 24.99372 * 11 9 8 33 33 H 1.08999 * 109.47117 * 270.17434 * 17 16 15 34 34 H 1.09003 * 109.47515 * 30.17764 * 17 16 15 35 35 H 1.09008 * 109.46718 * 150.17198 * 17 16 15 36 36 H 1.09004 * 109.47407 * 269.71640 * 19 18 16 37 37 H 0.96708 * 114.00246 * 180.02562 * 20 19 18 38 38 H 1.48506 * 109.99834 * 300.00486 * 21 19 18 39 39 H 1.48502 * 110.00011 * 61.31751 * 21 19 18 40 40 H 1.07998 * 127.25510 * 180.23477 * 22 18 16 41 41 H 1.08997 * 109.47484 * 60.00135 * 23 9 8 42 42 H 1.09005 * 109.47027 * 180.02562 * 23 9 8 43 43 H 1.08997 * 109.47002 * 300.00528 * 24 23 9 44 44 H 1.08998 * 109.47405 * 180.02562 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 3.9557 0.7808 -0.8907 7 6 4.0002 2.7420 -0.0011 8 6 5.5281 2.8220 -0.0011 9 6 6.0752 2.1289 1.2484 10 1 7.1636 2.1864 1.2486 11 7 5.5513 2.7935 2.4443 12 6 6.2326 2.7268 3.6053 13 8 7.2815 2.1147 3.6603 14 6 5.7046 3.3973 4.8110 15 7 4.5873 4.0912 4.8968 16 7 4.4315 4.5296 6.0943 17 6 3.2953 5.3339 6.5508 18 6 5.4671 4.1453 6.8708 19 6 5.6550 4.4626 8.3319 20 8 4.3776 4.6008 8.9574 21 14 6.6013 3.0824 9.1506 22 6 6.3023 3.4168 6.0935 23 6 5.6413 0.6618 1.2489 24 6 4.1133 0.5817 1.2490 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5140 0.8899 28 1 3.6108 3.2364 0.8889 29 1 3.6102 3.2358 -0.8911 30 1 5.8372 3.8673 -0.0019 31 1 5.9179 2.3276 -0.8909 32 1 4.7142 3.2816 2.4005 33 1 3.5201 6.3915 6.4130 34 1 2.4092 5.0725 5.9723 35 1 3.1111 5.1361 7.6068 36 1 6.2116 5.3944 8.4327 37 1 4.4220 4.8063 9.9013 38 1 5.8529 1.8063 9.0200 39 1 7.9440 2.9494 8.5302 40 1 7.2298 2.9493 6.3895 41 1 6.0310 0.1673 0.3592 42 1 6.0307 0.1680 2.1394 43 1 3.7237 1.0762 2.1388 44 1 3.8042 -0.4636 1.2499 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14474850_13259642.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:57:30 Heat of formation + Delta-G solvation = -74.565877 kcal Electronic energy + Delta-G solvation = -28339.932380 eV Core-core repulsion = 24260.752705 eV Total energy + Delta-G solvation = -4079.179675 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.156 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -43.97937 -41.96724 -40.97469 -39.05165 -37.94704 -37.58483 -35.07136 -34.49270 -32.94258 -31.95683 -31.47473 -28.83652 -28.41081 -26.78745 -25.21984 -24.30991 -23.78456 -22.39785 -21.85532 -21.18426 -20.22509 -18.79320 -18.63764 -18.46047 -17.89931 -17.72741 -17.55805 -17.45915 -16.73603 -16.43479 -15.97169 -15.81798 -15.38826 -15.21801 -15.04035 -14.95645 -14.82271 -14.34619 -14.04571 -13.95806 -13.79919 -13.63093 -13.48134 -13.33896 -13.23201 -12.98801 -12.95671 -12.26708 -12.18618 -12.12793 -12.06482 -11.90825 -11.69528 -11.48454 -11.42175 -11.22398 -10.92617 -10.41890 -10.11782 -9.97380 -5.03062 0.29863 0.64679 1.05198 1.17217 1.52322 1.66571 1.67264 2.02333 2.04651 2.15437 2.97006 3.13574 3.41752 3.46426 3.53644 3.63195 3.86709 3.96862 3.99174 4.09705 4.18681 4.21621 4.23326 4.26635 4.28322 4.34214 4.35083 4.37620 4.40226 4.45286 4.57276 4.63328 4.74598 4.80650 4.89293 4.99543 5.03709 5.04769 5.07471 5.19120 5.22769 5.30740 5.41714 5.56276 6.25563 6.60838 6.66184 6.81953 6.99199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.461 3.539 4 O -0.538 6.538 5 C -0.073 4.073 6 H 0.139 0.861 7 C -0.104 4.104 8 C -0.115 4.115 9 C 0.137 3.863 10 H 0.087 0.913 11 N -0.700 5.700 12 C 0.604 3.396 13 O -0.566 6.566 14 C -0.038 4.038 15 N -0.266 5.266 16 N -0.258 5.258 17 C 0.068 3.932 18 C 0.029 3.971 19 C -0.044 4.044 20 O -0.558 6.558 21 Si 0.814 3.186 22 C -0.217 4.217 23 C -0.124 4.124 24 C -0.103 4.103 25 H 0.063 0.937 26 H 0.128 0.872 27 H 0.057 0.943 28 H 0.056 0.944 29 H 0.080 0.920 30 H 0.082 0.918 31 H 0.111 0.889 32 H 0.409 0.591 33 H 0.100 0.900 34 H 0.096 0.904 35 H 0.138 0.862 36 H 0.118 0.882 37 H 0.416 0.584 38 H -0.311 1.311 39 H -0.292 1.292 40 H 0.157 0.843 41 H 0.105 0.895 42 H 0.055 0.945 43 H 0.049 0.951 44 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.803 2.599 4.409 5.426 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.306 3.694 4 O -0.428 6.428 5 C -0.092 4.092 6 H 0.157 0.843 7 C -0.142 4.142 8 C -0.152 4.152 9 C 0.034 3.966 10 H 0.105 0.895 11 N -0.352 5.352 12 C 0.389 3.611 13 O -0.443 6.443 14 C -0.196 4.196 15 N -0.104 5.104 16 N -0.047 5.047 17 C -0.069 4.069 18 C -0.097 4.097 19 C -0.154 4.154 20 O -0.370 6.370 21 Si 0.719 3.281 22 C -0.245 4.245 23 C -0.162 4.162 24 C -0.141 4.141 25 H 0.081 0.919 26 H 0.146 0.854 27 H 0.076 0.924 28 H 0.075 0.925 29 H 0.099 0.901 30 H 0.101 0.899 31 H 0.129 0.871 32 H 0.247 0.753 33 H 0.118 0.882 34 H 0.115 0.885 35 H 0.156 0.844 36 H 0.136 0.864 37 H 0.270 0.730 38 H -0.239 1.239 39 H -0.220 1.220 40 H 0.174 0.826 41 H 0.124 0.876 42 H 0.074 0.926 43 H 0.068 0.932 44 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -2.152 2.018 3.143 4.311 hybrid contribution -0.272 0.188 -0.116 0.351 sum -2.424 2.206 3.027 4.461 Atomic orbital electron populations 1.23509 0.75166 1.05558 1.02355 1.86510 1.24664 1.33194 1.83563 1.24377 0.93035 0.81006 0.70984 1.90666 1.68111 1.37361 1.46670 1.21233 0.85080 0.99796 1.03105 0.84292 1.21436 0.96214 0.93203 1.03327 1.21817 0.93939 1.02308 0.97176 1.21237 0.99405 0.92262 0.83716 0.89487 1.45996 1.26119 1.54130 1.08935 1.16969 0.83159 0.78866 0.82103 1.90771 1.24074 1.44404 1.85073 1.21889 0.95646 1.05893 0.96198 1.73473 1.18888 1.13731 1.04316 1.45792 1.18342 1.36325 1.04254 1.22912 0.84649 0.94913 1.04474 1.21469 0.90895 1.01975 0.95371 1.24425 0.92645 1.11718 0.86623 1.86208 1.25778 1.94677 1.30375 0.94577 0.74205 0.73606 0.85673 1.21527 1.03613 1.06440 0.92898 1.21902 0.94609 0.95827 1.03846 1.21427 0.96114 1.01324 0.95258 0.91857 0.85364 0.92397 0.92513 0.90103 0.89945 0.87107 0.75328 0.88207 0.88549 0.84405 0.86437 0.72960 1.23930 1.21975 0.82597 0.87639 0.92629 0.93215 0.89787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 113.37 1.20 1.21 16 2 O -0.36 -1.54 10.47 -51.39 -0.54 -2.07 16 3 C 0.46 2.52 7.25 71.24 0.52 3.04 16 4 O -0.54 -6.22 15.73 21.97 0.35 -5.88 16 5 C -0.07 0.05 2.63 -11.54 -0.03 0.02 16 6 H 0.14 -0.79 8.14 -2.39 -0.02 -0.81 16 7 C -0.10 0.09 4.32 30.59 0.13 0.22 16 8 C -0.11 0.41 5.61 30.59 0.17 0.58 16 9 C 0.14 0.21 2.78 44.99 0.13 0.33 16 10 H 0.09 0.35 7.58 -2.39 -0.02 0.33 16 11 N -0.70 -4.14 4.23 -445.53 -1.88 -6.02 16 12 C 0.60 7.68 7.79 86.75 0.68 8.36 16 13 O -0.57 -10.41 16.59 -3.94 -0.07 -10.48 16 14 C -0.04 -0.48 7.13 42.46 0.30 -0.18 16 15 N -0.27 -2.67 11.67 -48.17 -0.56 -3.23 16 16 N -0.26 -1.53 3.70 -355.92 -1.32 -2.85 16 17 C 0.07 -0.17 11.00 127.77 1.41 1.24 16 18 C 0.03 0.16 6.21 41.40 0.26 0.42 16 19 C -0.04 0.18 2.98 71.23 0.21 0.39 16 20 O -0.56 4.43 9.75 -148.98 -1.45 2.98 16 21 Si 0.81 -2.55 31.31 68.60 2.15 -0.40 16 22 C -0.22 -2.39 9.35 22.41 0.21 -2.18 16 23 C -0.12 -0.04 5.60 30.60 0.17 0.13 16 24 C -0.10 -0.05 4.98 30.60 0.15 0.10 16 25 H 0.06 0.04 8.13 -2.39 -0.02 0.02 16 26 H 0.13 -0.67 8.14 -2.39 -0.02 -0.69 16 27 H 0.06 0.08 8.13 -2.39 -0.02 0.07 16 28 H 0.06 0.13 6.46 -2.39 -0.02 0.12 16 29 H 0.08 -0.04 8.10 -2.39 -0.02 -0.06 16 30 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 31 H 0.11 -0.87 8.14 -2.38 -0.02 -0.89 16 32 H 0.41 1.90 6.59 -92.71 -0.61 1.29 16 33 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 34 H 0.10 -0.31 8.14 -2.39 -0.02 -0.32 16 35 H 0.14 -0.69 5.19 -2.38 -0.01 -0.70 16 36 H 0.12 -1.10 7.96 -2.38 -0.02 -1.11 16 37 H 0.42 -7.82 8.74 -74.05 -0.65 -8.46 16 38 H -0.31 -2.14 7.11 99.48 0.71 -1.43 16 39 H -0.29 -1.13 6.94 99.48 0.69 -0.44 16 40 H 0.16 1.76 6.91 -2.91 -0.02 1.74 16 41 H 0.11 -0.47 8.14 -2.39 -0.02 -0.49 16 42 H 0.05 0.30 8.14 -2.38 -0.02 0.28 16 43 H 0.05 0.22 7.60 -2.39 -0.02 0.20 16 44 H 0.08 -0.01 8.11 -2.39 -0.02 -0.03 16 Total: 0.00 -28.53 360.34 1.98 -26.55 By element: Atomic # 1 Polarization: -12.09 SS G_CDS: -0.20 Total: -12.29 kcal Atomic # 6 Polarization: 8.19 SS G_CDS: 5.50 Total: 13.69 kcal Atomic # 7 Polarization: -8.33 SS G_CDS: -3.76 Total: -12.10 kcal Atomic # 8 Polarization: -13.74 SS G_CDS: -1.71 Total: -15.45 kcal Atomic # 14 Polarization: -2.55 SS G_CDS: 2.15 Total: -0.40 kcal Total: -28.53 1.98 -26.55 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14474850_13259642.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.015 kcal (2) G-P(sol) polarization free energy of solvation -28.528 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.977 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.551 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds