Wall clock time and date at job start Thu Mar 4 2021 16:51:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28468 * 124.89229 * 2 1 4 4 C 1.31811 * 110.07617 * 180.13015 * 3 2 1 5 5 C 1.47704 * 126.51609 * 179.85666 * 4 3 2 6 6 O 1.21567 * 120.00195 * 179.69080 * 5 4 3 7 7 N 1.34779 * 120.00383 * 359.69179 * 5 4 3 8 8 C 1.46503 * 120.00316 * 179.97438 * 7 5 4 9 9 H 1.08991 * 112.90647 * 336.25486 * 8 7 5 10 10 C 1.53960 * 113.53212 * 107.50560 * 8 7 5 11 11 C 1.53785 * 87.01698 * 89.19337 * 10 8 7 12 12 H 1.09006 * 113.60792 * 270.76779 * 11 10 8 13 13 C 1.52997 * 113.61469 * 139.95194 * 11 10 8 14 14 N 1.46505 * 109.47212 * 85.85810 * 13 11 10 15 15 C 1.34942 * 126.03458 * 124.99756 * 14 13 11 16 16 C 1.35315 * 107.74657 * 179.97438 * 15 14 13 17 17 C 1.39869 * 107.91755 * 0.02562 * 16 15 14 18 18 N 1.30835 * 108.20182 * 359.74046 * 17 16 15 19 19 C 1.53781 * 87.17639 * 25.35630 * 11 10 8 20 20 C 1.41493 * 106.96399 * 359.59959 * 4 3 2 21 21 C 1.35044 * 124.88175 * 179.67605 * 2 1 3 22 22 C 1.50693 * 126.38326 * 0.02562 * 21 2 1 23 23 O 1.42902 * 109.47488 * 29.99903 * 22 21 2 24 24 Si 1.86305 * 109.47242 * 150.00106 * 22 21 2 25 25 H 1.08995 * 109.46849 * 270.33012 * 1 2 3 26 26 H 1.09006 * 109.46301 * 30.32043 * 1 2 3 27 27 H 1.08992 * 109.47186 * 150.32440 * 1 2 3 28 28 H 0.96998 * 119.99675 * 0.02562 * 7 5 4 29 29 H 1.08990 * 113.66647 * 334.66296 * 10 8 7 30 30 H 1.09003 * 113.60899 * 203.70789 * 10 8 7 31 31 H 1.09002 * 109.47153 * 325.85802 * 13 11 10 32 32 H 1.09001 * 109.46832 * 205.85993 * 13 11 10 33 33 H 1.08004 * 126.12839 * 359.95877 * 15 14 13 34 34 H 1.07997 * 126.04373 * 179.97438 * 16 15 14 35 35 H 1.08003 * 125.89723 * 179.97438 * 17 16 15 36 36 H 1.09004 * 113.61304 * 89.15831 * 19 11 10 37 37 H 1.08993 * 113.61499 * 219.98044 * 19 11 10 38 38 H 1.08001 * 127.25366 * 180.22078 * 20 4 3 39 39 H 1.09003 * 109.47394 * 269.99695 * 22 21 2 40 40 H 0.96698 * 114.00118 * 180.02562 * 23 22 21 41 41 H 1.48501 * 109.99922 * 300.00071 * 24 22 21 42 42 H 1.48493 * 109.99869 * 61.31613 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1999 1.0537 0.0000 4 6 3.4742 0.7167 -0.0028 5 6 4.6274 1.6395 -0.0067 6 8 5.7598 1.1974 -0.0034 7 7 4.4244 2.9719 -0.0140 8 6 5.5682 3.8873 -0.0173 9 1 6.4731 3.4369 0.3905 10 6 5.7846 4.5958 -1.3670 11 6 4.8407 5.6944 -0.8503 12 1 3.7903 5.5087 -1.0750 13 6 5.2865 7.1101 -1.2218 14 7 4.7802 7.4476 -2.5544 15 6 4.0307 8.5246 -2.8696 16 6 3.7720 8.4731 -4.1968 17 6 4.3839 7.3248 -4.7101 18 7 4.9928 6.7122 -3.7275 19 6 5.2505 5.2723 0.5705 20 6 3.5272 -0.6972 0.0047 21 6 2.2373 -1.1078 0.0063 22 6 1.7533 -2.5349 0.0138 23 8 0.4955 -2.6149 -0.6599 24 14 2.9947 -3.6163 -0.8581 25 1 -0.3633 0.0059 1.0276 26 1 -0.3632 0.8872 -0.5189 27 1 -0.3633 -0.8928 -0.5087 28 1 3.5208 3.3248 -0.0163 29 1 5.3877 4.0443 -2.2192 30 1 6.8083 4.9369 -1.5217 31 1 6.3754 7.1594 -1.2236 32 1 4.8920 7.8182 -0.4930 33 1 3.6969 9.2905 -2.1851 34 1 3.1944 9.1911 -4.7600 35 1 4.3610 7.0020 -5.7405 36 1 6.1279 5.7988 0.9464 37 1 4.4234 5.2676 1.2803 38 1 4.4108 -1.3183 0.0082 39 1 1.6362 -2.8735 1.0433 40 1 0.1232 -3.5067 -0.6930 41 1 3.1634 -3.1651 -2.2628 42 1 4.2983 -3.5667 -0.1488 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14688104_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:51:49 Heat of formation + Delta-G solvation = 127.511350 kcal Electronic energy + Delta-G solvation = -25982.481628 eV Core-core repulsion = 22162.124960 eV Total energy + Delta-G solvation = -3820.356667 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -44.01127 -42.09206 -41.24141 -39.47681 -37.95737 -35.23297 -34.55304 -33.54904 -32.76913 -30.98152 -29.08150 -28.27322 -26.82580 -26.75382 -25.05611 -23.80309 -22.40750 -21.93627 -21.64396 -21.10881 -20.38309 -18.68093 -18.47156 -18.18584 -17.76370 -17.48175 -17.08993 -16.48488 -16.16149 -15.96953 -15.73896 -15.56846 -15.24124 -15.08558 -14.91416 -14.79387 -14.46069 -14.03638 -13.80111 -13.67193 -13.57997 -13.47921 -13.44661 -12.99521 -12.88037 -12.27886 -12.21189 -12.09193 -11.75336 -11.61886 -11.52412 -11.29613 -10.94383 -10.46794 -10.35983 -10.15871 -9.99458 -9.50642 -5.04839 0.23764 0.61408 0.99702 1.14830 1.49088 1.65039 1.65922 1.90792 1.93633 2.02853 2.08211 2.95002 3.07696 3.29774 3.39165 3.44666 3.62930 3.70980 3.89534 3.97634 4.06704 4.16162 4.18268 4.26737 4.32162 4.33292 4.38354 4.42024 4.42816 4.59813 4.68856 4.74900 4.76939 4.80280 4.89101 4.94603 4.98552 5.01841 5.05787 5.13993 5.42975 5.54044 5.73425 6.17775 6.19063 6.62246 6.77829 6.81505 6.91657 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.257 5.257 3 N -0.262 5.262 4 C -0.038 4.038 5 C 0.605 3.395 6 O -0.569 6.569 7 N -0.687 5.687 8 C 0.106 3.894 9 H 0.093 0.907 10 C -0.135 4.135 11 C -0.110 4.110 12 H 0.083 0.917 13 C 0.136 3.864 14 N -0.376 5.376 15 C 0.053 3.947 16 C -0.293 4.293 17 C 0.024 3.976 18 N -0.333 5.333 19 C -0.113 4.113 20 C -0.217 4.217 21 C 0.030 3.970 22 C -0.042 4.042 23 O -0.557 6.557 24 Si 0.813 3.187 25 H 0.101 0.899 26 H 0.098 0.902 27 H 0.138 0.862 28 H 0.414 0.586 29 H 0.043 0.957 30 H 0.096 0.904 31 H 0.092 0.908 32 H 0.133 0.867 33 H 0.208 0.792 34 H 0.161 0.839 35 H 0.192 0.808 36 H 0.125 0.875 37 H 0.092 0.908 38 H 0.155 0.845 39 H 0.120 0.880 40 H 0.416 0.584 41 H -0.312 1.312 42 H -0.293 1.293 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.218 -0.958 4.305 9.326 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.045 5.045 3 N -0.100 5.100 4 C -0.196 4.196 5 C 0.391 3.609 6 O -0.446 6.446 7 N -0.338 5.338 8 C 0.001 3.999 9 H 0.111 0.889 10 C -0.173 4.173 11 C -0.129 4.129 12 H 0.101 0.899 13 C 0.016 3.984 14 N -0.159 5.159 15 C -0.093 4.093 16 C -0.322 4.322 17 C -0.161 4.161 18 N -0.155 5.155 19 C -0.151 4.151 20 C -0.245 4.245 21 C -0.096 4.096 22 C -0.152 4.152 23 O -0.370 6.370 24 Si 0.719 3.281 25 H 0.120 0.880 26 H 0.117 0.883 27 H 0.155 0.845 28 H 0.251 0.749 29 H 0.062 0.938 30 H 0.114 0.886 31 H 0.110 0.890 32 H 0.151 0.849 33 H 0.225 0.775 34 H 0.178 0.822 35 H 0.209 0.791 36 H 0.143 0.857 37 H 0.110 0.890 38 H 0.173 0.827 39 H 0.138 0.862 40 H 0.271 0.729 41 H -0.241 1.241 42 H -0.221 1.221 Dipole moment (debyes) X Y Z Total from point charges -6.663 -0.772 4.327 7.982 hybrid contribution -0.193 0.717 -0.478 0.883 sum -6.856 -0.055 3.849 7.863 Atomic orbital electron populations 1.22938 0.69934 1.07860 1.06247 1.45826 1.09413 1.01491 1.47819 1.73444 1.02357 1.14907 1.19312 1.21738 0.91232 0.93949 1.12699 1.17015 0.86233 0.82272 0.75411 1.90774 1.23949 1.77815 1.52080 1.45429 1.10768 1.04312 1.73251 1.22096 0.89487 0.90202 0.98160 0.88853 1.23400 1.00662 0.97067 0.96209 1.22748 0.99525 0.93450 0.97186 0.89882 1.22060 1.00620 0.97457 0.78278 1.48995 1.40494 1.18515 1.07853 1.23210 0.95471 0.92660 0.97985 1.21858 1.12298 1.02992 0.95067 1.24311 0.97035 0.95159 0.99640 1.77341 1.25200 1.20835 0.92130 1.23281 1.04167 0.92526 0.95117 1.21526 0.97178 0.94134 1.11697 1.21460 0.90207 0.91348 1.06577 1.24389 0.95219 0.91517 1.04106 1.86206 1.33923 1.37888 1.78963 0.94611 0.75360 0.83510 0.74643 0.88014 0.88312 0.84458 0.74943 0.93785 0.88554 0.89012 0.84950 0.77536 0.82179 0.79141 0.85672 0.88987 0.82707 0.86223 0.72904 1.24096 1.22114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.23 11.00 127.77 1.41 1.18 16 2 N -0.26 -1.41 3.70 -355.93 -1.32 -2.73 16 3 N -0.26 -2.54 11.67 -48.18 -0.56 -3.10 16 4 C -0.04 -0.51 7.13 42.45 0.30 -0.20 16 5 C 0.61 8.75 7.82 86.74 0.68 9.43 16 6 O -0.57 -12.00 16.53 -3.93 -0.06 -12.06 16 7 N -0.69 -4.99 5.26 -442.75 -2.33 -7.32 16 8 C 0.11 0.42 4.33 45.58 0.20 0.62 16 9 H 0.09 0.67 7.46 -2.39 -0.02 0.66 16 10 C -0.13 -0.61 7.44 31.18 0.23 -0.38 16 11 C -0.11 0.13 3.70 -10.27 -0.04 0.09 16 12 H 0.08 0.13 8.14 -2.38 -0.02 0.11 16 13 C 0.14 -0.43 6.33 86.38 0.55 0.11 16 14 N -0.38 -1.34 3.68 -348.05 -1.28 -2.62 16 15 C 0.05 0.03 11.45 83.54 0.96 0.98 16 16 C -0.29 -0.93 10.80 21.99 0.24 -0.69 16 17 C 0.02 0.16 12.03 85.24 1.02 1.19 16 18 N -0.33 -3.30 12.42 -57.02 -0.71 -4.01 16 19 C -0.11 0.49 7.39 31.12 0.23 0.72 16 20 C -0.22 -2.53 9.35 22.41 0.21 -2.32 16 21 C 0.03 0.17 6.21 41.40 0.26 0.43 16 22 C -0.04 0.17 2.98 71.23 0.21 0.39 16 23 O -0.56 4.54 9.76 -148.98 -1.45 3.08 16 24 Si 0.81 -2.19 31.31 68.60 2.15 -0.04 16 25 H 0.10 -0.70 8.14 -2.39 -0.02 -0.72 16 26 H 0.10 -0.44 8.14 -2.38 -0.02 -0.46 16 27 H 0.14 -0.78 5.19 -2.39 -0.01 -0.79 16 28 H 0.41 1.68 8.43 -92.71 -0.78 0.90 16 29 H 0.04 0.49 8.14 -2.39 -0.02 0.47 16 30 H 0.10 0.36 7.92 -2.39 -0.02 0.34 16 31 H 0.09 -0.34 7.88 -2.39 -0.02 -0.36 16 32 H 0.13 -1.33 8.07 -2.39 -0.02 -1.35 16 33 H 0.21 -1.62 8.06 -2.91 -0.02 -1.64 16 34 H 0.16 -0.14 8.06 -2.91 -0.02 -0.16 16 35 H 0.19 0.45 8.06 -2.91 -0.02 0.43 16 36 H 0.13 -1.06 8.10 -2.38 -0.02 -1.08 16 37 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 38 H 0.16 1.89 6.91 -2.91 -0.02 1.87 16 39 H 0.12 -1.15 7.96 -2.39 -0.02 -1.17 16 40 H 0.42 -7.91 8.74 -74.06 -0.65 -8.56 16 41 H -0.31 -2.39 7.11 99.48 0.71 -1.69 16 42 H -0.29 -1.32 6.94 99.48 0.69 -0.63 16 Total: 0.00 -32.24 357.89 0.54 -31.69 By element: Atomic # 1 Polarization: -14.09 SS G_CDS: -0.34 Total: -14.43 kcal Atomic # 6 Polarization: 5.08 SS G_CDS: 6.45 Total: 11.54 kcal Atomic # 7 Polarization: -13.59 SS G_CDS: -6.19 Total: -19.78 kcal Atomic # 8 Polarization: -7.46 SS G_CDS: -1.52 Total: -8.98 kcal Atomic # 14 Polarization: -2.19 SS G_CDS: 2.15 Total: -0.04 kcal Total: -32.24 0.54 -31.69 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14688104_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 159.206 kcal (2) G-P(sol) polarization free energy of solvation -32.238 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 126.968 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.543 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.695 kcal (6) G-S(sol) free energy of system = (1) + (5) 127.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds