Wall clock time and date at job start Thu Mar 4 2021 16:51:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47186 * 2 1 4 4 C 1.50707 * 109.46542 * 119.99573 * 2 1 3 5 5 C 1.35003 * 126.42284 * 210.04035 * 4 2 1 6 6 N 1.33590 * 108.65187 * 179.97438 * 5 4 2 7 7 C 1.32409 * 109.22315 * 359.97438 * 6 5 4 8 8 C 1.41251 * 132.11525 * 180.02562 * 7 6 5 9 9 Br 1.89105 * 120.25601 * 0.02562 * 8 7 6 10 10 C 1.35702 * 119.48983 * 180.02562 * 8 7 6 11 11 C 1.41764 * 119.53135 * 359.97438 * 10 8 7 12 12 C 1.47579 * 120.00765 * 180.02562 * 11 10 8 13 13 O 1.21591 * 119.99959 * 179.97438 * 12 11 10 14 14 N 1.34775 * 120.00294 * 0.02562 * 12 11 10 15 15 C 1.46498 * 120.00368 * 180.02562 * 14 12 11 16 16 H 1.09003 * 112.85064 * 336.19530 * 15 14 12 17 17 C 1.53950 * 113.53675 * 107.50244 * 15 14 12 18 18 C 1.53778 * 87.02008 * 89.19239 * 17 15 14 19 19 H 1.09000 * 113.61324 * 270.77276 * 18 17 15 20 20 C 1.53000 * 113.61854 * 139.94859 * 18 17 15 21 21 N 1.46499 * 109.46840 * 85.86223 * 20 18 17 22 22 C 1.34434 * 126.82191 * 124.99999 * 21 20 18 23 23 N 1.30831 * 108.08020 * 179.97438 * 22 21 20 24 24 C 1.33245 * 109.82847 * 0.02562 * 23 22 21 25 25 N 1.30718 * 108.94531 * 359.75451 * 24 23 22 26 26 C 1.53777 * 113.61634 * 205.00168 * 15 14 12 27 27 C 1.36490 * 119.98390 * 0.27541 * 11 10 8 28 28 N 1.35949 * 120.50379 * 359.44556 * 27 11 10 29 29 H 0.96693 * 114.00110 * 300.00512 * 1 2 3 30 30 H 1.08997 * 109.47478 * 239.99092 * 2 1 3 31 31 H 1.48498 * 109.99950 * 178.68132 * 3 2 1 32 32 H 1.48500 * 109.99833 * 299.99371 * 3 2 1 33 33 H 1.07997 * 125.67894 * 359.96420 * 5 4 2 34 34 H 1.08005 * 120.23514 * 179.97438 * 10 8 7 35 35 H 0.97004 * 119.99662 * 0.02562 * 14 12 11 36 36 H 1.09003 * 113.67167 * 334.66436 * 17 15 14 37 37 H 1.09005 * 113.61369 * 203.70959 * 17 15 14 38 38 H 1.09002 * 109.47398 * 205.86550 * 20 18 17 39 39 H 1.09001 * 109.47194 * 325.86730 * 20 18 17 40 40 H 1.08001 * 125.96097 * 359.93544 * 22 21 20 41 41 H 1.07998 * 125.53102 * 179.97438 * 24 23 22 42 42 H 1.09001 * 113.61353 * 156.33398 * 26 15 14 43 43 H 1.09000 * 113.61641 * 25.43299 * 26 15 14 44 44 H 1.07998 * 119.75127 * 179.72205 * 27 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 3.0850 -0.4606 1.8856 6 7 3.1759 -1.2954 2.9246 7 6 2.1062 -2.0754 2.9519 8 6 1.7114 -3.1113 3.8272 9 35 2.8108 -3.5955 5.2877 10 6 0.5371 -3.7564 3.6120 11 6 -0.2754 -3.3806 2.5128 12 6 -1.5548 -4.0747 2.2693 13 8 -2.2518 -3.7519 1.3267 14 7 -1.9512 -5.0657 3.0922 15 6 -3.2209 -5.7552 2.8502 16 1 -3.9271 -5.1533 2.2782 17 6 -3.0500 -7.1877 2.3129 18 6 -3.0197 -7.6483 3.7798 19 1 -2.0205 -7.6536 4.2153 20 6 -3.7835 -8.9504 4.0293 21 7 -2.9040 -10.0912 3.7623 22 6 -2.6143 -11.0993 4.6031 23 7 -1.7951 -11.9156 3.9913 24 6 -1.5396 -11.4638 2.7641 25 7 -2.1997 -10.3515 2.5753 26 6 -3.8306 -6.3850 4.1137 27 6 0.1283 -2.3801 1.6768 28 7 1.3020 -1.7297 1.8952 29 1 -0.3933 0.4417 0.7649 30 1 1.7924 -0.5139 -0.8899 31 1 3.5346 1.7702 0.0321 32 1 1.5616 2.4677 -1.2086 33 1 3.8134 0.2893 1.6147 34 1 0.2237 -4.5506 4.2735 35 1 -1.3956 -5.3225 3.8449 36 1 -2.1096 -7.3480 1.7855 37 1 -3.9149 -7.5522 1.7586 38 1 -4.1165 -8.9833 5.0666 39 1 -4.6489 -8.9964 3.3682 40 1 -2.9915 -11.2149 5.6085 41 1 -0.8947 -11.9412 2.0412 42 1 -4.9092 -6.5296 4.0526 43 1 -3.5195 -5.8981 5.0380 44 1 -0.4915 -2.0998 0.8379 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14688106_12335884.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:51:52 Heat of formation + Delta-G solvation = 164.146895 kcal Electronic energy + Delta-G solvation = -32552.596966 eV Core-core repulsion = 27943.906600 eV Total energy + Delta-G solvation = -4608.690366 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.054 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -44.31588 -42.95124 -41.56351 -39.86145 -38.45652 -38.00541 -35.66178 -35.22756 -34.03989 -32.48678 -32.12819 -31.82339 -30.30465 -29.07134 -26.93715 -26.69577 -25.97930 -24.32385 -24.13468 -22.83338 -22.66679 -22.38656 -22.11750 -20.40339 -19.60110 -18.73651 -18.30062 -18.12838 -17.76669 -17.54926 -17.08459 -16.76382 -16.31300 -16.24191 -16.07709 -15.94943 -15.83320 -15.62570 -15.28467 -15.17345 -15.03108 -14.75104 -14.62179 -14.08759 -14.00352 -13.52431 -13.47479 -13.36912 -13.15104 -13.02842 -12.80930 -12.71681 -12.19206 -12.16650 -11.72425 -11.58925 -11.40981 -11.38479 -11.30283 -11.24089 -10.94544 -10.92069 -10.76384 -10.53184 -10.27703 -10.04553 -9.13388 -4.97007 -0.94750 -0.42489 0.15243 0.73734 0.93513 1.06919 1.37719 1.49568 1.64465 1.74681 1.87617 1.98685 2.03699 2.18034 2.75728 3.03196 3.14131 3.31388 3.34477 3.41210 3.43914 3.48026 3.56275 3.67648 3.78170 3.80800 3.99274 4.07237 4.14936 4.20660 4.25967 4.29916 4.37582 4.44768 4.48125 4.61421 4.68911 4.80177 4.85611 4.91591 4.99876 5.07243 5.13675 5.22617 5.34987 5.47955 5.51102 5.53601 5.98841 6.25681 6.39252 6.47990 6.92999 7.16834 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.045 4.045 3 Si 0.807 3.193 4 C -0.080 4.080 5 C 0.036 3.964 6 N -0.492 5.492 7 C 0.227 3.773 8 C -0.080 4.080 9 Br 0.006 6.994 10 C -0.024 4.024 11 C -0.169 4.169 12 C 0.581 3.419 13 O -0.563 6.563 14 N -0.690 5.690 15 C 0.110 3.890 16 H 0.094 0.906 17 C -0.139 4.139 18 C -0.114 4.114 19 H 0.092 0.908 20 C 0.129 3.871 21 N -0.377 5.377 22 C 0.255 3.745 23 N -0.586 5.586 24 C 0.181 3.819 25 N -0.342 5.342 26 C -0.113 4.113 27 C 0.162 3.838 28 N -0.356 5.356 29 H 0.396 0.604 30 H 0.119 0.881 31 H -0.267 1.267 32 H -0.287 1.287 33 H 0.209 0.791 34 H 0.183 0.817 35 H 0.414 0.586 36 H 0.048 0.952 37 H 0.092 0.908 38 H 0.144 0.856 39 H 0.096 0.904 40 H 0.259 0.741 41 H 0.226 0.774 42 H 0.121 0.879 43 H 0.098 0.902 44 H 0.194 0.806 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.702 1.910 6.261 8.682 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.154 4.154 3 Si 0.707 3.293 4 C -0.191 4.191 5 C -0.114 4.114 6 N -0.211 5.211 7 C -0.019 4.019 8 C -0.162 4.162 9 Br 0.091 6.909 10 C -0.050 4.050 11 C -0.177 4.177 12 C 0.367 3.633 13 O -0.443 6.443 14 N -0.341 5.341 15 C 0.005 3.995 16 H 0.112 0.888 17 C -0.177 4.177 18 C -0.133 4.133 19 H 0.110 0.890 20 C 0.009 3.991 21 N -0.168 5.168 22 C -0.041 4.041 23 N -0.314 5.314 24 C -0.121 4.121 25 N -0.171 5.171 26 C -0.152 4.152 27 C 0.035 3.965 28 N -0.029 5.029 29 H 0.246 0.754 30 H 0.136 0.864 31 H -0.192 1.192 32 H -0.213 1.213 33 H 0.225 0.775 34 H 0.200 0.800 35 H 0.252 0.748 36 H 0.067 0.933 37 H 0.110 0.890 38 H 0.161 0.839 39 H 0.114 0.886 40 H 0.274 0.726 41 H 0.242 0.758 42 H 0.139 0.861 43 H 0.117 0.883 44 H 0.211 0.789 Dipole moment (debyes) X Y Z Total from point charges -4.460 2.455 5.183 7.265 hybrid contribution -0.234 -0.831 -1.003 1.324 sum -4.693 1.624 4.180 6.491 Atomic orbital electron populations 1.86485 1.17089 1.81744 1.50734 1.25197 0.85201 1.11549 0.93437 0.93065 0.78583 0.72529 0.85092 1.22374 0.97973 0.96375 1.02383 1.22860 0.96590 1.00219 0.91714 1.70828 1.19959 1.08057 1.22287 1.20697 0.89857 0.99818 0.91507 1.20561 0.98438 0.99252 0.97961 1.96844 1.66814 1.90575 1.36661 1.21322 0.90223 0.97885 0.95526 1.19239 0.98240 1.01132 0.99081 1.17543 0.84015 0.79655 0.82049 1.90851 1.55881 1.66410 1.31124 1.45393 1.23053 1.34996 1.30698 1.22032 0.85150 0.92688 0.99608 0.88754 1.23430 1.02326 0.95239 0.96751 1.22822 1.00175 0.93466 0.96815 0.89015 1.22276 0.90651 0.80772 1.05395 1.50785 1.35753 1.20769 1.09454 1.26894 0.93469 0.84274 0.99414 1.70540 1.20501 1.32219 1.08156 1.26394 0.99235 0.91829 0.94670 1.78015 1.13542 1.19531 1.05974 1.23293 1.01651 0.93032 0.97189 1.22247 0.85033 0.90265 0.98910 1.42710 1.15139 1.24012 1.21060 0.75396 0.86353 1.19216 1.21340 0.77483 0.79992 0.74820 0.93325 0.88983 0.83855 0.88620 0.72575 0.75752 0.86061 0.88344 0.78940 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.19 10.91 -148.98 -1.63 -0.43 16 2 C -0.05 0.11 3.06 71.24 0.22 0.33 16 3 Si 0.81 -4.37 31.34 68.60 2.15 -2.22 16 4 C -0.08 -0.09 6.24 41.01 0.26 0.17 16 5 C 0.04 0.10 10.44 83.68 0.87 0.97 16 6 N -0.49 -3.99 11.30 -194.10 -2.19 -6.19 16 7 C 0.23 1.38 7.59 134.18 1.02 2.39 16 8 C -0.08 -0.20 6.24 22.42 0.14 -0.06 16 9 Br 0.01 0.01 33.72 -20.37 -0.69 -0.67 16 10 C -0.02 0.06 9.26 22.55 0.21 0.27 16 11 C -0.17 0.04 5.84 -20.35 -0.12 -0.08 16 12 C 0.58 0.67 7.76 86.71 0.67 1.34 16 13 O -0.56 -5.00 15.87 -4.00 -0.06 -5.06 16 14 N -0.69 3.55 5.21 -442.89 -2.31 1.24 16 15 C 0.11 -0.61 4.33 45.57 0.20 -0.42 16 16 H 0.09 -0.16 7.46 -2.39 -0.02 -0.17 16 17 C -0.14 0.53 7.44 31.18 0.23 0.76 16 18 C -0.11 1.10 3.73 -10.27 -0.04 1.06 16 19 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 20 C 0.13 -1.37 6.37 86.38 0.55 -0.82 16 21 N -0.38 0.93 3.69 -352.06 -1.30 -0.37 16 22 C 0.26 -0.71 12.63 180.36 2.28 1.57 16 23 N -0.59 -2.87 11.19 -203.99 -2.28 -5.16 16 24 C 0.18 0.85 13.03 180.76 2.36 3.20 16 25 N -0.34 -1.57 12.57 -61.24 -0.77 -2.34 16 26 C -0.11 1.46 7.39 31.12 0.23 1.69 16 27 C 0.16 0.28 9.91 83.65 0.83 1.11 16 28 N -0.36 -1.16 2.93 -337.71 -0.99 -2.15 16 29 H 0.40 -3.61 8.70 -74.06 -0.64 -4.25 16 30 H 0.12 -0.22 7.96 -2.39 -0.02 -0.23 16 31 H -0.27 0.62 6.80 99.48 0.68 1.29 16 32 H -0.29 -0.40 7.11 99.48 0.71 0.31 16 33 H 0.21 -0.49 6.70 -2.91 -0.02 -0.51 16 34 H 0.18 -1.79 6.44 -2.91 -0.02 -1.81 16 35 H 0.41 -4.35 6.73 -92.71 -0.62 -4.98 16 36 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 37 H 0.09 -0.31 7.92 -2.38 -0.02 -0.32 16 38 H 0.14 -2.59 8.09 -2.39 -0.02 -2.61 16 39 H 0.10 -1.01 7.88 -2.39 -0.02 -1.03 16 40 H 0.26 -3.37 8.06 -2.91 -0.02 -3.40 16 41 H 0.23 -0.05 8.06 -2.91 -0.02 -0.07 16 42 H 0.12 -1.89 8.10 -2.39 -0.02 -1.91 16 43 H 0.10 -1.50 8.14 -2.39 -0.02 -1.52 16 44 H 0.19 0.38 6.20 -2.91 -0.02 0.36 16 Total: 0.00 -31.08 396.63 -0.33 -31.41 By element: Atomic # 1 Polarization: -21.40 SS G_CDS: -0.16 Total: -21.56 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: 9.90 Total: 13.50 kcal Atomic # 7 Polarization: -5.12 SS G_CDS: -9.85 Total: -14.97 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -1.69 Total: -5.49 kcal Atomic # 14 Polarization: -4.37 SS G_CDS: 2.15 Total: -2.22 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.67 kcal Total: -31.08 -0.33 -31.41 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14688106_12335884.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 195.558 kcal (2) G-P(sol) polarization free energy of solvation -31.082 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 164.476 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.329 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.411 kcal (6) G-S(sol) free energy of system = (1) + (5) 164.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds