Wall clock time and date at job start Thu Mar 4 2021 14:27:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34774 * 119.99623 * 2 1 4 4 O 1.21572 * 119.99648 * 184.08895 * 3 2 1 5 5 C 1.47707 * 120.00312 * 3.81827 * 3 2 1 6 6 N 1.31809 * 126.51899 * 353.80754 * 5 3 2 7 7 N 1.28466 * 110.07447 * 179.82171 * 6 5 3 8 8 C 1.46502 * 124.88241 * 180.18649 * 7 6 5 9 9 C 1.35030 * 110.22916 * 0.45455 * 7 6 5 10 10 C 1.50706 * 126.38368 * 179.74703 * 9 7 6 11 11 O 1.42902 * 109.46736 * 329.99885 * 10 9 7 12 12 Si 1.86302 * 109.46985 * 210.00291 * 10 9 7 13 13 C 1.35362 * 107.22955 * 359.73039 * 9 7 6 14 14 C 1.46500 * 120.00133 * 180.02562 * 2 1 3 15 15 H 1.08994 * 112.84816 * 191.19685 * 14 2 1 16 16 C 1.53784 * 113.61446 * 322.49985 * 14 2 1 17 17 C 1.53776 * 87.08377 * 89.11455 * 16 14 2 18 18 H 1.09000 * 113.61811 * 270.88604 * 17 16 14 19 19 C 1.50699 * 113.69017 * 139.98770 * 17 16 14 20 20 C 1.38237 * 120.00427 * 322.19999 * 19 17 16 21 21 C 1.38228 * 120.00261 * 179.80965 * 20 19 17 22 22 C 1.38239 * 119.99919 * 0.39343 * 21 20 19 23 23 C 1.38235 * 120.00017 * 359.85827 * 22 21 20 24 24 C 1.38235 * 119.99785 * 359.95667 * 23 22 21 25 25 C 1.53781 * 113.61709 * 59.99727 * 14 2 1 26 26 H 1.08997 * 109.47692 * 84.60678 * 1 2 3 27 27 H 1.09004 * 109.46911 * 204.60128 * 1 2 3 28 28 H 1.08995 * 109.47266 * 324.59954 * 1 2 3 29 29 H 1.09007 * 109.46778 * 270.30866 * 8 7 6 30 30 H 1.08996 * 109.47539 * 30.30792 * 8 7 6 31 31 H 1.09002 * 109.46887 * 150.31631 * 8 7 6 32 32 H 1.08989 * 109.46970 * 90.00174 * 10 9 7 33 33 H 0.96698 * 114.00277 * 299.99784 * 11 10 9 34 34 H 1.48506 * 110.00141 * 58.67837 * 12 10 9 35 35 H 1.48498 * 110.00011 * 179.97438 * 12 10 9 36 36 H 1.08001 * 127.24928 * 180.02562 * 13 9 7 37 37 H 1.08996 * 113.61361 * 203.67030 * 16 14 2 38 38 H 1.09010 * 113.61392 * 334.56850 * 16 14 2 39 39 H 1.08004 * 119.99441 * 359.97438 * 20 19 17 40 40 H 1.07999 * 120.00542 * 180.22924 * 21 20 19 41 41 H 1.08002 * 120.00337 * 179.83838 * 22 21 20 42 42 H 1.07999 * 119.99888 * 179.97438 * 23 22 21 43 43 H 1.08005 * 119.99813 * 180.02562 * 24 23 22 44 44 H 1.09003 * 113.61305 * 25.42817 * 25 14 2 45 45 H 1.09001 * 113.61333 * 156.33913 * 25 14 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1388 1.1672 0.0000 4 8 3.3522 1.1686 -0.0751 5 6 1.4027 2.4450 0.0852 6 7 0.0942 2.6002 0.0515 7 7 -0.2049 3.8454 0.1534 8 6 -1.5681 4.3820 0.1562 9 6 0.9180 4.5888 0.2516 10 6 0.9887 6.0886 0.3814 11 8 -0.1329 6.6772 -0.2800 12 14 2.5639 6.7058 -0.3989 13 6 1.9683 3.7358 0.2122 14 6 2.1975 -1.2687 -0.0006 15 1 3.2624 -1.1426 0.1945 16 6 1.5375 -2.3615 0.8567 17 6 0.7441 -2.7578 -0.3996 18 1 -0.1983 -2.2209 -0.5083 19 6 0.5930 -4.2468 -0.5757 20 6 1.6377 -5.0910 -0.2489 21 6 1.4978 -6.4571 -0.4068 22 6 0.3159 -6.9785 -0.8991 23 6 -0.7269 -6.1339 -1.2309 24 6 -0.5883 -4.7681 -1.0694 25 6 1.8954 -2.1540 -1.2212 26 1 -0.3634 0.0966 -1.0230 27 1 -0.3633 -0.9344 0.4278 28 1 -0.3633 0.8376 0.5953 29 1 -1.8741 4.6019 -0.8667 30 1 -2.2471 3.6471 0.5885 31 1 -1.5973 5.2965 0.7486 32 1 0.9739 6.3631 1.4360 33 1 -0.1837 6.4746 -1.2242 34 1 2.6110 6.3102 -1.8296 35 1 2.6453 8.1836 -0.2782 36 1 3.0172 3.9873 0.2668 37 1 2.2322 -3.1302 1.1950 38 1 0.9146 -1.9691 1.6607 39 1 2.5624 -4.6834 0.1323 40 1 2.3126 -7.1170 -0.1480 41 1 0.2074 -8.0456 -1.0250 42 1 -1.6501 -6.5412 -1.6159 43 1 -1.4032 -4.1082 -1.3281 44 1 1.5615 -1.5940 -2.0947 45 1 2.6881 -2.8661 -1.4510 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14797354_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:27:49 Heat of formation + Delta-G solvation = 99.023764 kcal Electronic energy + Delta-G solvation = -27631.025670 eV Core-core repulsion = 23812.059370 eV Total energy + Delta-G solvation = -3818.966300 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.157 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -43.87830 -41.79983 -40.19403 -38.80272 -38.16479 -35.55928 -34.30741 -32.66873 -31.91425 -31.62165 -28.62911 -28.46503 -26.90099 -26.69303 -25.88892 -24.22853 -23.45014 -22.30538 -21.80716 -20.95948 -19.68119 -18.89602 -18.20734 -17.71326 -17.51661 -17.14504 -17.05289 -16.43101 -16.18764 -16.07521 -15.80594 -15.65397 -15.26812 -14.95075 -14.85451 -14.35930 -14.25379 -14.12509 -14.09723 -13.95429 -13.65508 -13.52355 -13.38769 -13.08911 -12.99934 -12.72756 -12.63404 -12.22675 -12.11912 -11.88319 -11.70695 -11.62646 -11.23490 -11.16612 -10.90557 -10.20676 -9.97925 -9.80748 -9.71532 -9.51043 -4.89422 0.41050 0.45202 0.51742 0.81367 1.21760 1.51639 1.66276 1.87079 1.97758 2.23437 2.84832 3.08340 3.21667 3.34497 3.43739 3.66836 3.71240 3.88466 3.95158 4.03398 4.16262 4.21469 4.24407 4.30571 4.31068 4.35783 4.42882 4.48689 4.55546 4.61738 4.64552 4.66693 4.69245 4.70574 4.74082 4.83726 4.92400 4.96129 4.99529 5.14421 5.19399 5.20075 5.27002 5.56207 5.60504 5.65841 5.72014 5.77802 6.14156 6.21865 6.27895 6.75304 7.04301 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.582 5.582 3 C 0.598 3.402 4 O -0.567 6.567 5 C -0.038 4.038 6 N -0.256 5.256 7 N -0.267 5.267 8 C 0.078 3.922 9 C -0.011 4.011 10 C -0.042 4.042 11 O -0.537 6.537 12 Si 0.780 3.220 13 C -0.187 4.187 14 C 0.111 3.889 15 H 0.095 0.905 16 C -0.130 4.130 17 C -0.072 4.072 18 H 0.113 0.887 19 C -0.078 4.078 20 C -0.127 4.127 21 C -0.129 4.129 22 C -0.138 4.138 23 C -0.130 4.130 24 C -0.129 4.129 25 C -0.133 4.133 26 H 0.058 0.942 27 H 0.094 0.906 28 H 0.094 0.906 29 H 0.099 0.901 30 H 0.103 0.897 31 H 0.116 0.884 32 H 0.147 0.853 33 H 0.388 0.612 34 H -0.296 1.296 35 H -0.283 1.283 36 H 0.180 0.820 37 H 0.107 0.893 38 H 0.080 0.920 39 H 0.133 0.867 40 H 0.134 0.866 41 H 0.132 0.868 42 H 0.133 0.867 43 H 0.132 0.868 44 H 0.065 0.935 45 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.384 0.924 1.567 4.746 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.313 5.313 3 C 0.386 3.614 4 O -0.445 6.445 5 C -0.195 4.195 6 N -0.094 5.094 7 N -0.056 5.056 8 C -0.061 4.061 9 C -0.136 4.136 10 C -0.153 4.153 11 O -0.344 6.344 12 Si 0.683 3.317 13 C -0.215 4.215 14 C 0.008 3.992 15 H 0.114 0.886 16 C -0.168 4.168 17 C -0.090 4.090 18 H 0.131 0.869 19 C -0.078 4.078 20 C -0.144 4.144 21 C -0.147 4.147 22 C -0.156 4.156 23 C -0.148 4.148 24 C -0.147 4.147 25 C -0.172 4.172 26 H 0.077 0.923 27 H 0.112 0.888 28 H 0.112 0.888 29 H 0.117 0.883 30 H 0.122 0.878 31 H 0.134 0.866 32 H 0.164 0.836 33 H 0.238 0.762 34 H -0.223 1.223 35 H -0.210 1.210 36 H 0.197 0.803 37 H 0.125 0.875 38 H 0.099 0.901 39 H 0.151 0.849 40 H 0.152 0.848 41 H 0.150 0.850 42 H 0.151 0.849 43 H 0.150 0.850 44 H 0.084 0.916 45 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -4.668 1.108 1.420 5.003 hybrid contribution -0.264 0.148 -0.900 0.950 sum -4.931 1.256 0.520 5.115 Atomic orbital electron populations 1.22455 0.77378 1.04840 1.03029 1.47418 1.08174 1.04393 1.71326 1.17219 0.85831 0.82489 0.75858 1.90770 1.14337 1.87192 1.52153 1.21712 0.90341 0.94995 1.12502 1.73674 1.15558 1.00654 1.19507 1.45875 1.08824 1.02657 1.48234 1.22610 0.76039 1.01413 1.06044 1.22151 0.86502 0.96633 1.08323 1.24810 1.00619 0.85002 1.04852 1.86580 1.45287 1.74965 1.27606 0.93241 0.80597 0.78042 0.79817 1.21684 1.00939 0.90103 1.08768 1.22021 0.96978 0.82260 0.97988 0.88643 1.23456 0.99574 0.97237 0.96551 1.21843 0.99188 0.91228 0.96769 0.86928 1.19860 0.94080 0.95160 0.98730 1.21236 0.99188 0.93481 1.00530 1.21429 0.98263 0.95686 0.99360 1.21448 0.93872 1.00701 0.99553 1.21429 0.99593 0.93819 0.99966 1.21308 0.97795 0.95680 0.99893 1.23414 0.98621 0.98255 0.96872 0.92315 0.88794 0.88754 0.88266 0.87819 0.86596 0.83587 0.76216 1.22293 1.21006 0.80289 0.87469 0.90126 0.84923 0.84832 0.84986 0.84859 0.85006 0.91597 0.88361 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.00 8.27 127.77 1.06 1.05 16 2 N -0.58 -2.84 3.08 -823.22 -2.54 -5.38 16 3 C 0.60 6.13 7.68 86.75 0.67 6.80 16 4 O -0.57 -9.26 16.43 -3.94 -0.06 -9.33 16 5 C -0.04 -0.27 6.83 42.45 0.29 0.01 16 6 N -0.26 -0.96 8.48 -48.18 -0.41 -1.37 16 7 N -0.27 0.06 3.70 -355.91 -1.32 -1.26 16 8 C 0.08 -0.58 10.12 127.77 1.29 0.71 16 9 C -0.01 0.00 6.18 41.40 0.26 0.26 16 10 C -0.04 0.20 2.88 71.24 0.20 0.41 16 11 O -0.54 2.63 10.40 -148.98 -1.55 1.08 16 12 Si 0.78 -2.62 31.24 68.60 2.14 -0.48 16 13 C -0.19 -0.68 9.36 22.41 0.21 -0.47 16 14 C 0.11 0.33 4.44 45.52 0.20 0.54 16 15 H 0.10 0.61 7.26 -2.39 -0.02 0.59 16 16 C -0.13 0.15 6.67 31.12 0.21 0.36 16 17 C -0.07 0.08 3.30 -11.01 -0.04 0.04 16 18 H 0.11 -0.31 5.40 -2.39 -0.01 -0.33 16 19 C -0.08 -0.10 5.29 -19.87 -0.11 -0.20 16 20 C -0.13 -0.16 8.60 22.27 0.19 0.03 16 21 C -0.13 -0.20 10.05 22.27 0.22 0.02 16 22 C -0.14 -0.24 10.05 22.27 0.22 -0.01 16 23 C -0.13 -0.21 10.05 22.27 0.22 0.02 16 24 C -0.13 -0.18 9.71 22.27 0.22 0.03 16 25 C -0.13 -0.14 7.21 31.12 0.22 0.08 16 26 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 27 H 0.09 -0.33 4.52 -2.38 -0.01 -0.34 16 28 H 0.09 0.10 5.28 -2.39 -0.01 0.09 16 29 H 0.10 -1.00 8.14 -2.38 -0.02 -1.02 16 30 H 0.10 -0.94 8.14 -2.39 -0.02 -0.96 16 31 H 0.12 -1.01 6.77 -2.39 -0.02 -1.03 16 32 H 0.15 -1.13 7.96 -2.39 -0.02 -1.15 16 33 H 0.39 -3.54 8.70 -74.06 -0.64 -4.18 16 34 H -0.30 -1.02 7.11 99.48 0.71 -0.32 16 35 H -0.28 -0.67 7.11 99.48 0.71 0.03 16 36 H 0.18 0.12 7.03 -2.91 -0.02 0.10 16 37 H 0.11 -0.27 6.33 -2.39 -0.02 -0.28 16 38 H 0.08 -0.12 7.45 -2.38 -0.02 -0.14 16 39 H 0.13 -0.22 6.68 -2.91 -0.02 -0.24 16 40 H 0.13 -0.23 8.06 -2.91 -0.02 -0.26 16 41 H 0.13 -0.20 8.06 -2.91 -0.02 -0.22 16 42 H 0.13 -0.24 8.06 -2.91 -0.02 -0.27 16 43 H 0.13 -0.25 8.05 -2.91 -0.02 -0.27 16 44 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 45 H 0.10 0.05 7.71 -2.39 -0.02 0.03 16 Total: 0.00 -19.30 360.10 2.23 -17.07 By element: Atomic # 1 Polarization: -10.44 SS G_CDS: 0.42 Total: -10.02 kcal Atomic # 6 Polarization: 4.13 SS G_CDS: 5.55 Total: 9.68 kcal Atomic # 7 Polarization: -3.74 SS G_CDS: -4.26 Total: -8.00 kcal Atomic # 8 Polarization: -6.64 SS G_CDS: -1.61 Total: -8.25 kcal Atomic # 14 Polarization: -2.62 SS G_CDS: 2.14 Total: -0.48 kcal Total: -19.30 2.23 -17.07 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14797354_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.094 kcal (2) G-P(sol) polarization free energy of solvation -19.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 96.792 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.232 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.071 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.024 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds