Wall clock time and date at job start Thu Mar 4 2021 17:15:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.35011 * 126.42448 * 209.68507 * 4 2 1 6 6 N 1.33589 * 108.65208 * 179.82884 * 5 4 2 7 7 C 1.32408 * 109.22138 * 0.44494 * 6 5 4 8 8 C 1.41255 * 132.11581 * 179.71034 * 7 6 5 9 9 Br 1.89101 * 120.25284 * 0.04083 * 8 7 6 10 10 C 1.35701 * 119.49185 * 180.02562 * 8 7 6 11 11 C 1.41758 * 119.53231 * 359.97438 * 10 8 7 12 12 C 1.47580 * 120.01211 * 180.02562 * 11 10 8 13 13 O 1.21590 * 120.00225 * 180.02562 * 12 11 10 14 14 N 1.34778 * 119.99580 * 0.02562 * 12 11 10 15 15 C 1.46502 * 119.99828 * 179.97438 * 14 12 11 16 16 C 1.52997 * 109.47130 * 179.97438 * 15 14 12 17 17 H 1.09005 * 109.46840 * 304.99759 * 16 15 14 18 18 C 1.52993 * 109.47517 * 64.99857 * 16 15 14 19 19 C 1.52997 * 109.47517 * 179.97438 * 18 16 15 20 20 C 1.52996 * 109.47248 * 300.00330 * 19 18 16 21 21 H 1.09010 * 109.46571 * 299.99923 * 20 19 18 22 22 C 1.52997 * 109.47248 * 179.97438 * 20 19 18 23 23 O 1.42900 * 109.47104 * 64.99975 * 22 20 19 24 24 C 1.52996 * 109.47472 * 59.99299 * 20 19 18 25 25 C 1.52997 * 109.47456 * 300.00573 * 24 20 19 26 26 C 1.36496 * 119.98142 * 0.02562 * 11 10 8 27 27 N 1.35943 * 120.50368 * 359.97438 * 26 11 10 28 28 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 29 29 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 30 30 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 31 31 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 32 32 H 1.07996 * 125.67304 * 359.97438 * 5 4 2 33 33 H 1.08001 * 120.23390 * 179.97438 * 10 8 7 34 34 H 0.96993 * 120.00150 * 359.97438 * 14 12 11 35 35 H 1.08997 * 109.47245 * 300.00002 * 15 14 12 36 36 H 1.09001 * 109.47103 * 59.99609 * 15 14 12 37 37 H 1.09000 * 109.47164 * 300.00537 * 18 16 15 38 38 H 1.08998 * 109.47397 * 59.99744 * 18 16 15 39 39 H 1.08996 * 109.47448 * 179.97438 * 19 18 16 40 40 H 1.08999 * 109.47095 * 60.00279 * 19 18 16 41 41 H 1.09006 * 109.47116 * 184.99651 * 22 20 19 42 42 H 1.08997 * 109.47310 * 304.99273 * 22 20 19 43 43 H 0.96702 * 113.99844 * 179.97438 * 23 22 20 44 44 H 1.09000 * 109.47505 * 179.97438 * 24 20 19 45 45 H 1.09005 * 109.46866 * 60.00275 * 24 20 19 46 46 H 1.08993 * 109.47251 * 299.99744 * 25 24 20 47 47 H 1.09005 * 109.47421 * 179.97438 * 25 24 20 48 48 H 1.08002 * 119.74642 * 180.02562 * 26 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 3.0883 -0.4653 1.8814 6 7 3.1766 -1.2965 2.9235 7 6 2.1071 -2.0765 2.9508 8 6 1.7128 -3.1134 3.8253 9 35 2.8129 -3.5986 5.2848 10 6 0.5383 -3.7583 3.6103 11 6 -0.2749 -3.3814 2.5120 12 6 -1.5544 -4.0753 2.2686 13 8 -2.2516 -3.7522 1.3262 14 7 -1.9502 -5.0671 3.0909 15 6 -3.2206 -5.7556 2.8496 16 6 -3.4295 -6.8300 3.9186 17 1 -2.5689 -7.4989 3.9344 18 6 -3.5834 -6.1645 5.2875 19 6 -3.7929 -7.2389 6.3564 20 6 -5.0559 -8.0398 6.0338 21 1 -5.9163 -7.3706 6.0177 22 6 -5.2651 -9.1146 7.1024 23 8 -5.5245 -8.4905 8.3614 24 6 -4.9021 -8.7054 4.6648 25 6 -4.6926 -7.6310 3.5959 26 6 0.1259 -2.3766 1.6796 27 7 1.3023 -1.7303 1.8947 28 1 -0.3934 0.4418 -0.7650 29 1 1.7923 -0.5137 -0.8901 30 1 1.5616 2.4678 1.2086 31 1 3.5346 1.7703 -0.0322 32 1 3.8196 0.2805 1.6070 33 1 0.2254 -4.5531 4.2712 34 1 -1.3939 -5.3251 3.8424 35 1 -4.0379 -5.0357 2.8929 36 1 -3.1996 -6.2225 1.8649 37 1 -2.6838 -5.5935 5.5171 38 1 -4.4439 -5.4956 5.2717 39 1 -3.9022 -6.7647 7.3317 40 1 -2.9326 -7.9080 6.3725 41 1 -6.1130 -9.7415 6.8261 42 1 -4.3685 -9.7296 7.1795 43 1 -5.6677 -9.1134 9.0871 44 1 -5.8017 -9.2764 4.4352 45 1 -4.0418 -9.3746 4.6809 46 1 -5.5528 -6.9619 3.5799 47 1 -4.5825 -8.1052 2.6207 48 1 -0.4968 -2.0923 0.8443 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14939082_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:15:24 Heat of formation + Delta-G solvation = -36.004449 kcal Electronic energy + Delta-G solvation = -32240.828624 eV Core-core repulsion = 27730.195387 eV Total energy + Delta-G solvation = -4510.633236 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.083 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -44.37494 -41.31905 -40.04342 -38.55451 -37.92809 -37.61712 -36.03078 -35.36474 -33.26355 -32.35093 -31.93450 -31.68355 -30.34573 -28.32548 -26.92112 -25.81337 -24.40174 -24.19896 -23.62935 -22.55518 -21.82793 -21.64705 -20.73070 -19.26143 -18.85030 -18.62344 -18.20465 -18.00033 -17.50694 -17.06445 -16.67335 -16.29089 -16.19972 -15.97792 -15.86721 -15.55912 -15.48402 -15.17017 -15.13108 -14.81812 -14.66251 -14.58264 -14.21915 -13.98631 -13.51347 -13.41661 -13.33328 -13.12946 -13.07747 -12.84113 -12.81190 -12.50726 -12.10395 -12.02361 -11.89199 -11.70210 -11.57867 -11.43123 -11.39500 -11.37392 -11.07548 -11.05788 -10.78439 -10.76653 -10.31373 -10.07679 -9.15782 -5.00969 -0.97546 -0.46596 0.10866 0.89007 1.06891 1.38838 1.62978 1.67345 1.94262 2.01397 2.16767 2.66876 2.96233 3.12919 3.30059 3.31783 3.35911 3.48255 3.63302 3.74813 3.77654 3.81993 3.98072 4.09967 4.19386 4.23564 4.28230 4.31755 4.37039 4.43638 4.46809 4.51266 4.52695 4.60786 4.67354 4.71307 4.78419 4.82073 4.88044 4.97359 5.08520 5.10653 5.17436 5.19407 5.26137 5.28142 5.35997 5.46565 5.47674 5.57956 6.27087 6.30969 6.73556 6.88350 6.93425 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.052 4.052 3 Si 0.822 3.178 4 C -0.044 4.044 5 C 0.017 3.983 6 N -0.494 5.494 7 C 0.224 3.776 8 C -0.085 4.085 9 Br 0.008 6.992 10 C -0.019 4.019 11 C -0.173 4.173 12 C 0.579 3.421 13 O -0.564 6.564 14 N -0.705 5.705 15 C 0.125 3.875 16 C -0.089 4.089 17 H 0.093 0.907 18 C -0.115 4.115 19 C -0.107 4.107 20 C -0.090 4.090 21 H 0.061 0.939 22 C 0.075 3.925 23 O -0.597 6.597 24 C -0.108 4.108 25 C -0.110 4.110 26 C 0.169 3.831 27 N -0.357 5.357 28 H 0.415 0.585 29 H 0.110 0.890 30 H -0.310 1.310 31 H -0.271 1.271 32 H 0.202 0.798 33 H 0.188 0.812 34 H 0.414 0.586 35 H 0.063 0.937 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.055 0.945 39 H 0.053 0.947 40 H 0.069 0.931 41 H 0.050 0.950 42 H 0.054 0.946 43 H 0.394 0.606 44 H 0.069 0.931 45 H 0.074 0.926 46 H 0.062 0.938 47 H 0.076 0.924 48 H 0.196 0.804 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.629 -3.323 -3.527 5.513 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.382 6.382 2 C -0.160 4.160 3 Si 0.724 3.276 4 C -0.156 4.156 5 C -0.133 4.133 6 N -0.213 5.213 7 C -0.021 4.021 8 C -0.167 4.167 9 Br 0.093 6.907 10 C -0.045 4.045 11 C -0.181 4.181 12 C 0.365 3.635 13 O -0.444 6.444 14 N -0.357 5.357 15 C 0.002 3.998 16 C -0.108 4.108 17 H 0.111 0.889 18 C -0.153 4.153 19 C -0.144 4.144 20 C -0.109 4.109 21 H 0.079 0.921 22 C -0.003 4.003 23 O -0.405 6.405 24 C -0.145 4.145 25 C -0.148 4.148 26 C 0.043 3.957 27 N -0.030 5.030 28 H 0.269 0.731 29 H 0.128 0.872 30 H -0.238 1.238 31 H -0.197 1.197 32 H 0.218 0.782 33 H 0.205 0.795 34 H 0.252 0.748 35 H 0.082 0.918 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.074 0.926 39 H 0.071 0.929 40 H 0.087 0.913 41 H 0.069 0.931 42 H 0.072 0.928 43 H 0.244 0.756 44 H 0.088 0.912 45 H 0.092 0.908 46 H 0.081 0.919 47 H 0.095 0.905 48 H 0.213 0.787 Dipole moment (debyes) X Y Z Total from point charges -1.419 -2.454 -2.541 3.807 hybrid contribution -0.585 -0.847 0.296 1.071 sum -2.003 -3.301 -2.246 4.467 Atomic orbital electron populations 1.86329 1.16780 1.82726 1.52362 1.24724 0.86300 1.11424 0.93562 0.94117 0.77900 0.71248 0.84287 1.21689 0.96642 0.95310 1.01915 1.22677 0.97225 1.00833 0.92518 1.70780 1.20569 1.08223 1.21726 1.20756 0.89949 0.99966 0.91462 1.20568 0.98755 0.99310 0.98048 1.96826 1.66737 1.90445 1.36667 1.21390 0.89897 0.97828 0.95399 1.19326 0.98516 1.01134 0.99102 1.17465 0.83895 0.79909 0.82251 1.90836 1.55942 1.66202 1.31404 1.45754 1.23691 1.35346 1.30887 1.21532 0.84333 0.94458 0.99465 1.21374 1.00036 0.95978 0.93416 0.88871 1.21624 1.02109 0.97670 0.93860 1.21459 0.97243 0.97535 0.98180 1.21186 0.98721 0.96861 0.94099 0.92069 1.22335 0.99643 0.94696 0.83605 1.86436 1.94546 1.39589 1.19936 1.21465 1.02727 0.97728 0.92600 1.21471 0.96876 0.97373 0.99088 1.22294 0.84613 0.89589 0.99179 1.42725 1.15200 1.24066 1.21030 0.73113 0.87199 1.23783 1.19726 0.78170 0.79531 0.74807 0.91839 0.91063 0.91045 0.92578 0.92851 0.91252 0.93140 0.92751 0.75617 0.91215 0.90771 0.91928 0.90493 0.78711 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 1.70 10.88 -148.98 -1.62 0.08 16 2 C -0.05 0.14 3.05 71.23 0.22 0.35 16 3 Si 0.82 -3.96 31.29 68.60 2.15 -1.81 16 4 C -0.04 -0.27 6.27 41.01 0.26 -0.01 16 5 C 0.02 0.14 10.44 83.68 0.87 1.01 16 6 N -0.49 -6.35 11.30 -194.10 -2.19 -8.55 16 7 C 0.22 2.32 7.59 134.19 1.02 3.34 16 8 C -0.08 -0.47 6.24 22.42 0.14 -0.33 16 9 Br 0.01 0.04 33.72 -20.37 -0.69 -0.65 16 10 C -0.02 0.00 9.26 22.55 0.21 0.21 16 11 C -0.17 -0.42 5.84 -20.35 -0.12 -0.54 16 12 C 0.58 1.69 7.76 86.71 0.67 2.36 16 13 O -0.56 -5.70 16.27 -4.00 -0.07 -5.76 16 14 N -0.70 2.38 5.24 -466.22 -2.44 -0.06 16 15 C 0.13 -0.42 5.06 86.38 0.44 0.02 16 16 C -0.09 0.59 2.23 -10.80 -0.02 0.56 16 17 H 0.09 -0.80 8.14 -2.38 -0.02 -0.82 16 18 C -0.12 0.55 5.08 30.59 0.16 0.71 16 19 C -0.11 0.30 5.10 30.59 0.16 0.46 16 20 C -0.09 0.22 2.43 -10.80 -0.03 0.19 16 21 H 0.06 0.06 8.14 -2.38 -0.02 0.04 16 22 C 0.07 -0.19 6.43 71.98 0.46 0.28 16 23 O -0.60 -0.49 13.20 -148.98 -1.97 -2.46 16 24 C -0.11 0.61 5.20 30.59 0.16 0.77 16 25 C -0.11 0.65 5.20 30.59 0.16 0.81 16 26 C 0.17 0.90 9.91 83.65 0.83 1.73 16 27 N -0.36 -2.85 2.93 -337.72 -0.99 -3.84 16 28 H 0.42 -5.74 8.74 -74.05 -0.65 -6.38 16 29 H 0.11 -0.82 7.96 -2.38 -0.02 -0.84 16 30 H -0.31 -1.61 7.11 99.48 0.71 -0.90 16 31 H -0.27 0.36 6.91 99.48 0.69 1.05 16 32 H 0.20 0.68 6.78 -2.91 -0.02 0.66 16 33 H 0.19 -1.49 6.44 -2.91 -0.02 -1.51 16 34 H 0.41 -3.59 5.69 -92.71 -0.53 -4.12 16 35 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 36 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 37 H 0.07 -0.48 7.18 -2.39 -0.02 -0.49 16 38 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 39 H 0.05 0.06 7.82 -2.39 -0.02 0.05 16 40 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 41 H 0.05 -0.19 8.14 -2.38 -0.02 -0.21 16 42 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 43 H 0.39 -2.84 9.12 -74.06 -0.68 -3.51 16 44 H 0.07 -0.40 8.14 -2.39 -0.02 -0.42 16 45 H 0.07 -0.51 8.14 -2.38 -0.02 -0.53 16 46 H 0.06 -0.27 8.14 -2.39 -0.02 -0.29 16 47 H 0.08 -0.52 8.14 -2.38 -0.02 -0.54 16 48 H 0.20 0.91 6.19 -2.91 -0.02 0.89 16 Total: 0.00 -26.94 405.56 -3.04 -29.98 By element: Atomic # 1 Polarization: -18.03 SS G_CDS: -0.80 Total: -18.83 kcal Atomic # 6 Polarization: 6.32 SS G_CDS: 5.58 Total: 11.90 kcal Atomic # 7 Polarization: -6.82 SS G_CDS: -5.63 Total: -12.45 kcal Atomic # 8 Polarization: -4.49 SS G_CDS: -3.65 Total: -8.14 kcal Atomic # 14 Polarization: -3.96 SS G_CDS: 2.15 Total: -1.81 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -0.69 Total: -0.65 kcal Total: -26.94 -3.04 -29.98 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14939082_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.022 kcal (2) G-P(sol) polarization free energy of solvation -26.942 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.964 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.982 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.004 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds