Wall clock time and date at job start Thu Mar 4 2021 17:24:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17401 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 O 1.42897 * 109.47185 * 35.40412 * 3 2 1 5 5 C 1.42909 * 114.00285 * 179.97438 * 4 3 2 6 6 H 1.09000 * 109.46355 * 30.00021 * 5 4 3 7 7 C 1.52996 * 109.47119 * 149.99866 * 5 4 3 8 8 C 1.53002 * 109.46972 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.46817 * 299.99733 * 8 7 5 10 10 H 1.09001 * 109.47502 * 300.00518 * 9 8 7 11 11 N 1.46500 * 109.47007 * 180.02562 * 9 8 7 12 12 C 1.34773 * 120.00050 * 85.00124 * 11 9 8 13 13 O 1.21571 * 120.00211 * 0.02562 * 12 11 9 14 14 C 1.47715 * 120.00051 * 179.97438 * 12 11 9 15 15 N 1.31813 * 126.51689 * 359.68582 * 14 12 11 16 16 N 1.28469 * 110.07183 * 179.81862 * 15 14 12 17 17 C 1.46498 * 124.88557 * 180.20475 * 16 15 14 18 18 C 1.35039 * 110.23037 * 0.46077 * 16 15 14 19 19 C 1.50699 * 126.38373 * 179.74868 * 18 16 15 20 20 O 1.42891 * 109.47226 * 29.99450 * 19 18 16 21 21 Si 1.86296 * 109.46945 * 149.99885 * 19 18 16 22 22 C 1.35366 * 107.22583 * 359.72408 * 18 16 15 23 23 C 1.53006 * 109.47127 * 60.00361 * 9 8 7 24 24 C 1.52997 * 109.47135 * 269.99884 * 5 4 3 25 25 H 4.38437 * 5.44413 * 179.97438 * 4 1 2 26 26 H 1.08994 * 109.47383 * 275.39956 * 3 2 1 27 27 H 1.09000 * 109.47084 * 155.39854 * 3 2 1 28 28 H 1.08996 * 109.47452 * 60.00020 * 7 5 4 29 29 H 1.09000 * 109.47054 * 300.00180 * 7 5 4 30 30 H 1.09002 * 109.47070 * 179.97438 * 8 7 5 31 31 H 1.08996 * 109.47407 * 59.99513 * 8 7 5 32 32 H 0.97002 * 120.00030 * 265.00025 * 11 9 8 33 33 H 1.08999 * 109.47131 * 270.29411 * 17 16 15 34 34 H 1.09005 * 109.46999 * 30.29259 * 17 16 15 35 35 H 1.09000 * 109.47265 * 150.29212 * 17 16 15 36 36 H 1.09003 * 109.46625 * 269.99412 * 19 18 16 37 37 H 0.96707 * 114.00000 * 60.00475 * 20 19 18 38 38 H 1.48506 * 110.00018 * 179.97438 * 21 19 18 39 39 H 1.48495 * 109.99933 * 301.31503 * 21 19 18 40 40 H 1.08006 * 127.24504 * 180.02562 * 22 18 16 41 41 H 1.08993 * 109.46955 * 60.00011 * 23 9 8 42 42 H 1.09000 * 109.47050 * 179.97438 * 23 9 8 43 43 H 1.09002 * 109.47153 * 59.99856 * 24 5 4 44 44 H 1.08993 * 109.47194 * 300.00144 * 24 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1228 -1.0972 -0.7805 5 6 4.5475 -1.1883 -0.8464 6 1 4.9799 -0.7858 0.0696 7 6 4.9581 -2.6537 -1.0032 8 6 6.4834 -2.7512 -1.0731 9 6 6.9913 -1.9482 -2.2722 10 1 6.5591 -2.3505 -3.1884 11 7 8.4518 -2.0420 -2.3396 12 6 9.0319 -3.0888 -2.9592 13 8 8.3434 -3.9550 -3.4626 14 6 10.5045 -3.1831 -3.0275 15 7 11.3695 -2.3192 -2.5348 16 7 12.5693 -2.7136 -2.7701 17 6 13.7814 -1.9996 -2.3612 18 6 12.5525 -3.8781 -3.4536 19 6 13.7544 -4.6577 -3.9212 20 8 14.8429 -4.4399 -3.0215 21 14 13.3384 -6.4731 -3.9650 22 6 11.2546 -4.2149 -3.6399 23 6 6.5806 -0.4826 -2.1154 24 6 5.0549 -0.3853 -2.0458 25 1 -1.0498 -0.0004 0.0000 26 1 3.0094 -0.0959 1.0230 27 1 3.0089 0.9352 -0.4278 28 1 4.5256 -3.0563 -1.9191 29 1 4.5966 -3.2258 -0.1487 30 1 6.7761 -3.7953 -1.1844 31 1 6.9156 -2.3488 -0.1570 32 1 9.0012 -1.3506 -1.9382 33 1 14.0745 -1.3023 -3.1460 34 1 13.5859 -1.4494 -1.4407 35 1 14.5856 -2.7158 -2.1925 36 1 14.0367 -4.3254 -4.9202 37 1 14.6619 -4.7132 -2.1117 38 1 14.5155 -7.2529 -4.4252 39 1 12.9212 -6.9312 -2.6155 40 1 10.8723 -5.0876 -4.1484 41 1 7.0129 -0.0802 -1.1993 42 1 6.9429 0.0896 -2.9695 43 1 4.7623 0.6588 -1.9341 44 1 4.6224 -0.7878 -2.9617 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14940684_13259642.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:24:30 Heat of formation + Delta-G solvation = 24.451445 kcal Electronic energy + Delta-G solvation = -26374.330865 eV Core-core repulsion = 22489.900955 eV Total energy + Delta-G solvation = -3884.429910 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.157 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.84470 -41.06953 -39.87936 -38.26582 -37.85815 -35.08128 -34.39459 -33.88746 -32.62746 -31.88094 -30.09649 -28.47257 -27.66187 -26.69359 -24.56605 -23.81217 -22.75649 -22.17090 -21.35164 -20.73249 -19.39557 -19.13156 -17.90154 -17.62860 -17.56781 -17.39371 -17.04896 -16.53892 -16.37142 -16.07641 -15.81864 -15.71966 -15.29780 -15.00003 -14.86495 -14.77175 -14.26090 -14.12742 -13.77166 -13.68952 -13.52448 -13.39484 -13.23453 -12.64063 -12.60833 -12.28459 -12.23591 -12.13021 -12.06761 -11.99561 -11.64625 -11.34726 -11.30631 -11.22057 -11.01704 -10.44012 -10.28102 -10.01026 -9.96463 -4.88847 0.43983 0.81744 1.21536 1.49085 1.55335 1.67663 1.79776 1.93723 2.09882 2.30715 2.88746 3.02933 3.32478 3.34242 3.52264 3.64618 3.67904 4.01055 4.03189 4.11678 4.16404 4.24363 4.31127 4.31978 4.34490 4.36785 4.43758 4.44865 4.47855 4.50290 4.62817 4.66447 4.73521 4.79614 4.92647 5.02704 5.03616 5.10979 5.14031 5.24367 5.26178 5.29328 5.46671 5.67391 6.20982 6.24181 6.39372 6.57896 6.81937 7.12704 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.236 4.236 3 C 0.167 3.833 4 O -0.400 6.400 5 C 0.089 3.911 6 H 0.086 0.914 7 C -0.110 4.110 8 C -0.118 4.118 9 C 0.143 3.857 10 H 0.072 0.928 11 N -0.703 5.703 12 C 0.604 3.396 13 O -0.565 6.565 14 C -0.041 4.041 15 N -0.265 5.265 16 N -0.264 5.264 17 C 0.064 3.936 18 C -0.014 4.014 19 C -0.044 4.044 20 O -0.536 6.536 21 Si 0.783 3.217 22 C -0.187 4.187 23 C -0.114 4.114 24 C -0.135 4.135 25 H 0.247 0.753 26 H 0.090 0.910 27 H 0.090 0.910 28 H 0.060 0.940 29 H 0.073 0.927 30 H 0.056 0.944 31 H 0.082 0.918 32 H 0.415 0.585 33 H 0.093 0.907 34 H 0.103 0.897 35 H 0.130 0.870 36 H 0.145 0.855 37 H 0.390 0.610 38 H -0.283 1.283 39 H -0.293 1.293 40 H 0.181 0.819 41 H 0.091 0.909 42 H 0.080 0.920 43 H 0.084 0.916 44 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.266 3.887 1.924 6.084 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.236 4.236 3 C 0.092 3.908 4 O -0.320 6.320 5 C 0.032 3.968 6 H 0.104 0.896 7 C -0.149 4.149 8 C -0.157 4.157 9 C 0.039 3.961 10 H 0.090 0.910 11 N -0.354 5.354 12 C 0.389 3.611 13 O -0.442 6.442 14 C -0.199 4.199 15 N -0.103 5.103 16 N -0.053 5.053 17 C -0.075 4.075 18 C -0.139 4.139 19 C -0.154 4.154 20 O -0.344 6.344 21 Si 0.685 3.315 22 C -0.215 4.215 23 C -0.152 4.152 24 C -0.173 4.173 25 H 0.264 0.736 26 H 0.107 0.893 27 H 0.108 0.892 28 H 0.079 0.921 29 H 0.092 0.908 30 H 0.075 0.925 31 H 0.101 0.899 32 H 0.252 0.748 33 H 0.111 0.889 34 H 0.122 0.878 35 H 0.148 0.852 36 H 0.163 0.837 37 H 0.240 0.760 38 H -0.209 1.209 39 H -0.220 1.220 40 H 0.198 0.802 41 H 0.109 0.891 42 H 0.099 0.901 43 H 0.102 0.898 44 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 4.316 3.682 1.877 5.975 hybrid contribution 0.420 0.082 0.811 0.917 sum 4.736 3.764 2.688 6.620 Atomic orbital electron populations 1.25849 0.96989 0.97509 0.98596 1.23272 0.95196 1.02808 1.02317 1.19328 0.84042 0.90863 0.96551 1.87972 1.22559 1.49249 1.72235 1.22284 0.79481 0.96148 0.98866 0.89636 1.21484 0.94952 0.95448 1.02991 1.21798 0.94666 1.00472 0.98736 1.21098 0.78719 0.97247 0.99030 0.91011 1.45833 1.07894 1.24804 1.56873 1.17053 0.84814 0.81695 0.77523 1.90793 1.63915 1.40924 1.48542 1.21826 0.93659 0.96995 1.07384 1.73456 0.90611 1.24535 1.21656 1.45706 1.05653 1.16005 1.37961 1.22887 0.81994 0.99370 1.03211 1.22135 0.97653 0.91122 1.03019 1.24851 0.83538 1.10207 0.96776 1.86556 1.38869 1.85058 1.23898 0.93161 0.83534 0.70480 0.84287 1.21720 0.90727 1.02688 1.06348 1.21702 0.95504 0.93658 1.04303 1.21961 0.94955 1.01411 0.98977 0.73618 0.89269 0.89198 0.92113 0.90848 0.92522 0.89943 0.74831 0.88872 0.87841 0.85208 0.83722 0.75950 1.20948 1.22002 0.80169 0.89089 0.90123 0.89773 0.91883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.54 19.25 74.32 1.43 0.89 16 2 C -0.24 -1.31 13.73 31.12 0.43 -0.89 16 3 C 0.17 0.19 6.22 70.18 0.44 0.63 16 4 O -0.40 -1.94 9.95 -148.98 -1.48 -3.42 16 5 C 0.09 -0.05 2.61 30.59 0.08 0.03 16 6 H 0.09 -0.39 7.79 -2.39 -0.02 -0.41 16 7 C -0.11 -0.17 5.57 30.59 0.17 0.00 16 8 C -0.12 -0.12 5.49 30.59 0.17 0.05 16 9 C 0.14 0.17 2.45 44.99 0.11 0.28 16 10 H 0.07 0.44 7.57 -2.39 -0.02 0.42 16 11 N -0.70 -1.62 5.07 -445.52 -2.26 -3.88 16 12 C 0.60 5.10 7.79 86.75 0.68 5.77 16 13 O -0.56 -8.43 16.59 -3.94 -0.07 -8.50 16 14 C -0.04 -0.26 7.13 42.46 0.30 0.04 16 15 N -0.26 -1.08 11.67 -48.17 -0.56 -1.64 16 16 N -0.26 -0.07 3.70 -355.92 -1.32 -1.38 16 17 C 0.06 -0.43 11.00 127.77 1.41 0.98 16 18 C -0.01 0.00 6.18 41.40 0.26 0.26 16 19 C -0.04 0.21 2.99 71.24 0.21 0.42 16 20 O -0.54 2.80 10.02 -148.98 -1.49 1.30 16 21 Si 0.78 -2.98 31.23 68.60 2.14 -0.84 16 22 C -0.19 -0.62 9.35 22.41 0.21 -0.41 16 23 C -0.11 0.46 5.39 30.61 0.17 0.62 16 24 C -0.13 0.30 5.54 30.61 0.17 0.47 16 25 H 0.25 -1.09 7.80 -4.43 -0.03 -1.13 16 26 H 0.09 -0.24 8.08 -2.39 -0.02 -0.26 16 27 H 0.09 -0.26 7.87 -2.39 -0.02 -0.28 16 28 H 0.06 0.29 8.14 -2.39 -0.02 0.27 16 29 H 0.07 0.13 8.14 -2.39 -0.02 0.11 16 30 H 0.06 0.32 8.14 -2.39 -0.02 0.30 16 31 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 32 H 0.41 -0.60 8.33 -92.71 -0.77 -1.37 16 33 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 34 H 0.10 -0.88 8.14 -2.38 -0.02 -0.90 16 35 H 0.13 -1.21 5.00 -2.39 -0.01 -1.23 16 36 H 0.15 -1.08 7.96 -2.39 -0.02 -1.10 16 37 H 0.39 -3.89 8.39 -74.05 -0.62 -4.51 16 38 H -0.28 -0.54 7.11 99.48 0.71 0.16 16 39 H -0.29 -0.77 7.11 99.48 0.71 -0.06 16 40 H 0.18 0.03 7.02 -2.91 -0.02 0.01 16 41 H 0.09 -0.68 8.14 -2.39 -0.02 -0.69 16 42 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 43 H 0.08 -0.37 7.87 -2.39 -0.02 -0.39 16 44 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 Total: 0.00 -22.37 370.12 0.85 -21.52 By element: Atomic # 1 Polarization: -11.97 SS G_CDS: -0.33 Total: -12.30 kcal Atomic # 6 Polarization: 2.92 SS G_CDS: 6.22 Total: 9.14 kcal Atomic # 7 Polarization: -2.77 SS G_CDS: -4.14 Total: -6.90 kcal Atomic # 8 Polarization: -7.58 SS G_CDS: -3.04 Total: -10.62 kcal Atomic # 14 Polarization: -2.98 SS G_CDS: 2.14 Total: -0.84 kcal Total: -22.37 0.85 -21.52 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14940684_13259642.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.972 kcal (2) G-P(sol) polarization free energy of solvation -22.370 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.601 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.850 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.520 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds