Wall clock time and date at job start Thu Mar 4 2021 17:50:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.30280 * 126.28163 * 2 1 4 4 N 1.28665 * 109.37669 * 179.73143 * 3 2 1 5 5 C 1.30272 * 109.38559 * 0.44547 * 4 3 2 6 6 C 1.50696 * 126.28364 * 179.82841 * 5 4 3 7 7 H 1.08999 * 112.84914 * 190.88560 * 6 5 4 8 8 C 1.53781 * 113.69134 * 322.15030 * 6 5 4 9 9 C 1.54049 * 87.08031 * 139.98880 * 8 6 5 10 10 H 1.09000 * 113.61076 * 89.06984 * 9 8 6 11 11 N 1.46494 * 113.69866 * 220.05561 * 9 8 6 12 12 C 1.34779 * 119.99525 * 252.42298 * 11 9 8 13 13 O 1.21564 * 120.00350 * 359.97438 * 12 11 9 14 14 C 1.47720 * 119.99532 * 180.02562 * 12 11 9 15 15 N 1.31804 * 126.51943 * 359.68346 * 14 12 11 16 16 N 1.28466 * 110.07190 * 179.82418 * 15 14 12 17 17 C 1.46500 * 124.88344 * 180.16441 * 16 15 14 18 18 C 1.35031 * 110.23173 * 0.45695 * 16 15 14 19 19 C 1.50707 * 126.38677 * 179.70831 * 18 16 15 20 20 O 1.42896 * 109.46903 * 329.99710 * 19 18 16 21 21 Si 1.86304 * 109.46927 * 209.99759 * 19 18 16 22 22 C 1.35364 * 107.23132 * 359.72435 * 18 16 15 23 23 C 1.53781 * 113.61615 * 59.68631 * 6 5 4 24 24 O 1.34358 * 126.28412 * 180.02562 * 2 1 3 25 25 H 1.09001 * 109.46930 * 269.99977 * 1 2 3 26 26 H 1.09004 * 109.47222 * 29.99708 * 1 2 3 27 27 H 1.09001 * 109.46976 * 150.00111 * 1 2 3 28 28 H 1.09005 * 113.61471 * 254.54463 * 8 6 5 29 29 H 1.08996 * 113.61178 * 25.35805 * 8 6 5 30 30 H 0.97000 * 120.00537 * 72.42383 * 11 9 8 31 31 H 1.09000 * 109.47318 * 270.33276 * 17 16 15 32 32 H 1.08996 * 109.47618 * 30.33377 * 17 16 15 33 33 H 1.09004 * 109.47241 * 150.33423 * 17 16 15 34 34 H 1.09004 * 109.46944 * 90.00102 * 19 18 16 35 35 H 0.96698 * 114.00125 * 300.00536 * 20 19 18 36 36 H 1.48495 * 109.99776 * 180.02562 * 21 19 18 37 37 H 1.48504 * 109.99942 * 301.31802 * 21 19 18 38 38 H 1.07996 * 127.25201 * 179.97438 * 22 18 16 39 39 H 1.09002 * 113.61445 * 334.48493 * 23 6 5 40 40 H 1.09002 * 113.61408 * 105.30224 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 0.0057 5 6 3.5654 -0.6254 0.0000 6 6 4.8176 -1.4638 0.0000 7 1 4.6212 -2.5180 -0.1951 8 6 5.9523 -0.8796 -0.8580 9 6 6.9174 -1.3209 0.2586 10 1 7.2940 -2.3362 0.1342 11 7 7.9779 -0.3496 0.5382 12 6 9.2453 -0.6081 0.1595 13 8 9.5085 -1.6473 -0.4136 14 6 10.3147 0.3711 0.4419 15 7 10.1740 1.5334 1.0473 16 7 11.3099 2.1279 1.1297 17 6 11.5265 3.4392 1.7460 18 6 12.2743 1.3731 0.5609 19 6 13.7357 1.7243 0.4503 20 8 13.8796 3.1437 0.3697 21 14 14.4486 0.9399 -1.0818 22 6 11.6838 0.2422 0.1084 23 6 5.7215 -1.2210 1.2202 24 8 2.3021 -1.0831 -0.0005 25 1 -0.3633 0.0000 1.0277 26 1 -0.3634 0.8900 -0.5138 27 1 -0.3633 -0.8900 -0.5138 28 1 6.1036 -1.4072 -1.7998 29 1 5.8926 0.2015 -0.9833 30 1 7.7680 0.4795 0.9958 31 1 11.4025 4.2188 0.9944 32 1 10.8025 3.5883 2.5470 33 1 12.5358 3.4861 2.1551 34 1 14.2658 1.3545 1.3280 35 1 13.4321 3.5420 -0.3894 36 1 15.8895 1.2782 -1.2022 37 1 14.2765 -0.5341 -1.0248 38 1 12.1577 -0.5841 -0.4005 39 1 5.5996 -0.2331 1.6643 40 1 5.6853 -2.0236 1.9569 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14942244_13259642.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:50:53 Heat of formation + Delta-G solvation = 79.020320 kcal Electronic energy + Delta-G solvation = -25970.016141 eV Core-core repulsion = 21984.412171 eV Total energy + Delta-G solvation = -3985.603969 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.132 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -45.32423 -43.86030 -41.13879 -39.41636 -38.01555 -37.26963 -35.02379 -34.36640 -33.57310 -32.56953 -29.76374 -28.60005 -27.08309 -26.89597 -26.50284 -24.66858 -23.66098 -23.05079 -22.19798 -21.23330 -20.66106 -19.08720 -18.59635 -18.50374 -17.63791 -17.59694 -17.32523 -17.02383 -16.45569 -16.01840 -15.79498 -15.75058 -15.59364 -15.39512 -15.05201 -14.62103 -14.26959 -14.01303 -13.79014 -13.65835 -13.60126 -13.56487 -13.44661 -13.41246 -12.97982 -12.74196 -12.61125 -12.39651 -12.32024 -11.94070 -11.89507 -11.83622 -11.31472 -10.92634 -10.49286 -10.32003 -10.03659 -9.98311 -4.96423 0.05623 0.41694 0.79769 1.17335 1.20575 1.24501 1.54791 1.71448 1.97220 2.10621 2.25047 2.77237 3.17154 3.21200 3.31280 3.34936 3.35785 3.50383 3.65321 3.72560 3.96842 4.03126 4.29577 4.30450 4.35866 4.38693 4.42063 4.47529 4.51599 4.52861 4.60768 4.62336 4.66301 4.69017 4.73496 4.80943 4.87815 5.01563 5.08170 5.19659 5.43927 5.66906 6.33736 6.56320 6.79997 7.06924 7.20295 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.168 3.832 3 N -0.332 5.332 4 N -0.314 5.314 5 C 0.176 3.824 6 C -0.017 4.017 7 H 0.154 0.846 8 C -0.132 4.132 9 C 0.127 3.873 10 H 0.127 0.873 11 N -0.697 5.697 12 C 0.607 3.393 13 O -0.564 6.564 14 C -0.039 4.039 15 N -0.262 5.262 16 N -0.259 5.259 17 C 0.077 3.923 18 C -0.006 4.006 19 C -0.035 4.035 20 O -0.543 6.543 21 Si 0.788 3.212 22 C -0.197 4.197 23 C -0.119 4.119 24 O -0.230 6.230 25 H 0.118 0.882 26 H 0.116 0.884 27 H 0.114 0.886 28 H 0.093 0.907 29 H 0.089 0.911 30 H 0.415 0.585 31 H 0.109 0.891 32 H 0.098 0.902 33 H 0.116 0.884 34 H 0.128 0.872 35 H 0.398 0.602 36 H -0.282 1.282 37 H -0.290 1.290 38 H 0.162 0.838 39 H 0.092 0.908 40 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.834 1.790 0.564 2.624 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.043 4.043 3 N -0.178 5.178 4 N -0.159 5.159 5 C -0.035 4.035 6 C -0.037 4.037 7 H 0.172 0.828 8 C -0.172 4.172 9 C 0.022 3.978 10 H 0.144 0.856 11 N -0.347 5.347 12 C 0.393 3.607 13 O -0.441 6.441 14 C -0.197 4.197 15 N -0.100 5.100 16 N -0.048 5.048 17 C -0.062 4.062 18 C -0.132 4.132 19 C -0.147 4.147 20 O -0.351 6.351 21 Si 0.692 3.308 22 C -0.225 4.225 23 C -0.158 4.158 24 O -0.110 6.110 25 H 0.136 0.864 26 H 0.134 0.866 27 H 0.132 0.868 28 H 0.111 0.889 29 H 0.107 0.893 30 H 0.252 0.748 31 H 0.127 0.873 32 H 0.116 0.884 33 H 0.134 0.866 34 H 0.145 0.855 35 H 0.249 0.751 36 H -0.208 1.208 37 H -0.216 1.216 38 H 0.179 0.821 39 H 0.110 0.890 40 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -1.150 2.500 0.942 2.909 hybrid contribution -0.140 -1.263 0.485 1.360 sum -1.290 1.237 1.427 2.287 Atomic orbital electron populations 1.20705 0.76889 1.07245 1.06892 1.28997 0.99369 0.78861 0.97110 1.74373 0.96502 1.27102 1.19865 1.74240 1.12728 1.10345 1.18586 1.28229 0.85424 0.91364 0.98504 1.21224 0.82588 0.99262 1.00617 0.82847 1.23609 0.92069 1.02540 0.98933 1.22510 0.85009 0.94559 0.95693 0.85559 1.45726 1.06399 1.23195 1.59363 1.17036 0.81897 0.84186 0.77584 1.90782 1.83014 1.26847 1.43477 1.21784 0.95214 0.94959 1.07723 1.73493 1.09763 1.07620 1.19163 1.45719 1.02945 1.17096 1.39063 1.22662 1.05694 0.77688 1.00117 1.22152 0.94651 0.93766 1.02633 1.24822 0.89489 0.87831 1.12522 1.86476 1.77920 1.17248 1.53452 0.93161 0.78290 0.77813 0.81555 1.21629 0.92688 1.00322 1.07842 1.23434 0.91545 1.04801 0.96015 1.84808 1.17696 1.38638 1.69892 0.86414 0.86571 0.86786 0.88855 0.89292 0.74828 0.87279 0.88354 0.86558 0.85494 0.75137 1.20828 1.21645 0.82066 0.88982 0.87263 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.39 10.51 71.24 0.75 1.14 16 2 C 0.17 0.68 8.48 88.34 0.75 1.43 16 3 N -0.33 -3.56 12.22 -165.50 -2.02 -5.58 16 4 N -0.31 -3.27 11.85 -165.51 -1.96 -5.23 16 5 C 0.18 0.87 7.53 88.34 0.67 1.53 16 6 C -0.02 0.04 4.29 -11.01 -0.05 -0.01 16 7 H 0.15 -1.11 8.14 -2.39 -0.02 -1.13 16 8 C -0.13 0.05 7.43 31.21 0.23 0.29 16 9 C 0.13 -0.06 4.25 45.61 0.19 0.14 16 10 H 0.13 0.02 7.47 -2.39 -0.02 0.00 16 11 N -0.70 -2.01 5.36 -442.60 -2.37 -4.38 16 12 C 0.61 5.28 7.83 86.75 0.68 5.96 16 13 O -0.56 -8.19 16.53 -3.92 -0.06 -8.26 16 14 C -0.04 -0.29 7.13 42.46 0.30 0.01 16 15 N -0.26 -1.27 11.67 -48.17 -0.56 -1.83 16 16 N -0.26 -0.10 3.70 -355.92 -1.32 -1.41 16 17 C 0.08 -0.54 10.12 127.77 1.29 0.75 16 18 C -0.01 0.00 6.18 41.41 0.26 0.25 16 19 C -0.04 0.15 2.87 71.24 0.20 0.35 16 20 O -0.54 3.74 10.40 -148.98 -1.55 2.19 16 21 Si 0.79 -2.77 31.37 68.60 2.15 -0.61 16 22 C -0.20 -1.04 9.35 22.41 0.21 -0.83 16 23 C -0.12 0.39 7.37 31.12 0.23 0.62 16 24 O -0.23 -1.08 10.87 -3.60 -0.04 -1.11 16 25 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 26 H 0.12 -0.92 8.14 -2.39 -0.02 -0.94 16 27 H 0.11 -1.17 8.14 -2.39 -0.02 -1.19 16 28 H 0.09 -0.13 8.14 -2.38 -0.02 -0.15 16 29 H 0.09 0.27 7.79 -2.39 -0.02 0.25 16 30 H 0.41 0.40 8.45 -92.71 -0.78 -0.39 16 31 H 0.11 -1.20 8.14 -2.39 -0.02 -1.22 16 32 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 33 H 0.12 -0.97 6.77 -2.38 -0.02 -0.99 16 34 H 0.13 -0.54 7.96 -2.38 -0.02 -0.56 16 35 H 0.40 -5.51 8.70 -74.06 -0.64 -6.15 16 36 H -0.28 -0.58 7.11 99.48 0.71 0.12 16 37 H -0.29 -0.94 6.83 99.48 0.68 -0.26 16 38 H 0.16 0.87 6.84 -2.91 -0.02 0.85 16 39 H 0.09 -0.11 8.07 -2.39 -0.02 -0.13 16 40 H 0.11 -0.72 8.14 -2.39 -0.02 -0.74 16 Total: 0.00 -26.81 348.43 -2.32 -29.14 By element: Atomic # 1 Polarization: -14.23 SS G_CDS: -0.31 Total: -14.54 kcal Atomic # 6 Polarization: 5.92 SS G_CDS: 5.72 Total: 11.63 kcal Atomic # 7 Polarization: -10.20 SS G_CDS: -8.23 Total: -18.44 kcal Atomic # 8 Polarization: -5.53 SS G_CDS: -1.65 Total: -7.18 kcal Atomic # 14 Polarization: -2.77 SS G_CDS: 2.15 Total: -0.61 kcal Total: -26.81 -2.32 -29.14 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14942244_13259642.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.158 kcal (2) G-P(sol) polarization free energy of solvation -26.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.138 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds