Wall clock time and date at job start Thu Mar 4 2021 18:00:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.42898 * 109.47171 * 2 1 4 4 C 1.35900 * 117.00309 * 275.32370 * 3 2 1 5 5 C 1.38736 * 120.05303 * 5.09017 * 4 3 2 6 6 C 1.38146 * 119.94018 * 179.74592 * 5 4 3 7 7 C 1.38268 * 120.05703 * 0.49999 * 6 5 4 8 8 C 1.50693 * 119.94472 * 179.74749 * 7 6 5 9 9 O 1.42894 * 109.47366 * 245.02599 * 8 7 6 10 10 Si 1.86301 * 109.47283 * 5.02608 * 8 7 6 11 11 C 1.38267 * 120.11015 * 359.77497 * 7 6 5 12 12 C 1.38142 * 120.05418 * 359.97186 * 11 7 6 13 13 C 1.50695 * 109.46869 * 120.00560 * 2 1 3 14 14 O 1.21284 * 119.99652 * 244.99593 * 13 2 1 15 15 N 1.34779 * 120.00524 * 64.99701 * 13 2 1 16 16 C 1.46496 * 120.00119 * 179.97438 * 15 13 2 17 17 C 1.53004 * 109.47337 * 274.99937 * 16 15 13 18 18 C 1.53000 * 109.47038 * 300.00265 * 17 16 15 19 19 C 1.52995 * 109.47046 * 299.99934 * 18 17 16 20 20 C 1.52991 * 109.47554 * 60.00061 * 19 18 17 21 21 C 1.53002 * 109.47408 * 300.00128 * 20 19 18 22 22 C 1.53003 * 109.46927 * 300.00054 * 21 20 19 23 23 C 1.53005 * 109.47241 * 59.99801 * 22 21 20 24 24 O 1.42899 * 109.46902 * 180.02562 * 23 22 21 25 25 C 1.53000 * 109.46809 * 300.00053 * 23 22 21 26 26 C 1.52991 * 109.47021 * 59.99885 * 23 22 21 27 27 H 1.08996 * 109.47242 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47398 * 59.99363 * 1 2 3 29 29 H 1.08998 * 109.47016 * 299.99719 * 1 2 3 30 30 H 1.09005 * 109.46373 * 240.00134 * 2 1 3 31 31 H 1.08003 * 120.02472 * 359.97438 * 5 4 3 32 32 H 1.07996 * 119.97022 * 180.23030 * 6 5 4 33 33 H 1.09000 * 109.47199 * 125.02016 * 8 7 6 34 34 H 0.96696 * 114.00277 * 59.99870 * 9 8 7 35 35 H 1.48499 * 110.00176 * 58.67623 * 10 8 7 36 36 H 1.48497 * 110.00132 * 180.02562 * 10 8 7 37 37 H 1.07999 * 119.97213 * 179.97438 * 11 7 6 38 38 H 1.08005 * 120.02560 * 179.97438 * 12 11 7 39 39 H 0.96997 * 119.99504 * 0.02562 * 15 13 2 40 40 H 1.08997 * 109.47438 * 35.00089 * 16 15 13 41 41 H 1.09002 * 109.46709 * 59.99884 * 17 16 15 42 42 H 1.09003 * 109.46855 * 179.97438 * 18 17 16 43 43 H 1.09002 * 109.47285 * 60.00031 * 18 17 16 44 44 H 1.09005 * 109.47110 * 180.02562 * 19 18 17 45 45 H 1.08993 * 109.47554 * 179.97438 * 20 19 18 46 46 H 1.09000 * 109.47300 * 59.99765 * 20 19 18 47 47 H 1.08994 * 109.47463 * 179.97438 * 21 20 19 48 48 H 1.08997 * 109.47427 * 179.97438 * 22 21 20 49 49 H 1.09002 * 109.46756 * 299.99657 * 22 21 20 50 50 H 0.96706 * 113.99901 * 59.99866 * 24 23 22 51 51 H 1.09002 * 109.47301 * 300.00212 * 25 23 22 52 52 H 1.09002 * 109.47177 * 180.02562 * 25 23 22 53 53 H 1.09002 * 109.47507 * 60.00435 * 26 23 22 54 54 H 1.09003 * 109.47064 * 180.02562 * 26 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 2.1061 1.9664 -1.2056 5 6 1.6544 1.3304 -2.3529 6 6 1.7521 1.9641 -3.5765 7 6 2.3090 3.2269 -3.6598 8 6 2.4196 3.9135 -4.9967 9 8 3.7981 4.0834 -5.3324 10 14 1.5868 2.8742 -6.2994 11 6 2.7652 3.8606 -2.5187 12 6 2.6649 3.2332 -1.2920 13 6 2.0323 -0.7105 1.2304 14 8 2.6530 -0.0980 2.0734 15 7 1.7918 -2.0265 1.3941 16 6 2.2806 -2.7173 2.5899 17 6 3.7285 -3.1592 2.3677 18 6 3.7940 -4.1072 1.1686 19 6 2.9222 -5.3346 1.4406 20 6 1.4744 -4.8928 1.6628 21 6 1.4088 -3.9448 2.8619 22 6 1.9193 -4.6663 4.1109 23 6 3.3672 -5.1081 3.8887 24 8 3.8437 -5.7824 5.0550 25 6 3.4327 -6.0560 2.6895 26 6 4.2389 -3.8806 3.6167 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 0.5138 0.8900 30 1 1.8933 -0.5139 -0.8901 31 1 1.2233 0.3422 -2.2888 32 1 1.3972 1.4710 -4.4693 33 1 1.9352 4.8886 -4.9455 34 1 4.2926 3.2549 -5.3955 35 1 0.1601 2.6635 -5.9456 36 1 1.6894 3.5402 -7.6227 37 1 3.2002 4.8467 -2.5864 38 1 3.0218 3.7284 -0.4010 39 1 1.2958 -2.5164 0.7197 40 1 2.2339 -2.0420 3.4442 41 1 4.3496 -2.2846 2.1739 42 1 4.8256 -4.4216 1.0100 43 1 3.4304 -3.5932 0.2788 44 1 2.9693 -6.0102 0.5864 45 1 0.8533 -5.7673 1.8561 46 1 1.1107 -4.3788 0.7730 47 1 0.3774 -3.6298 3.0200 48 1 1.8729 -3.9909 4.9651 49 1 1.2981 -5.5408 4.3047 50 1 3.3367 -6.5725 5.2873 51 1 2.8116 -6.9306 2.8833 52 1 4.4642 -6.3712 2.5314 53 1 4.1922 -3.2052 4.4710 54 1 5.2703 -4.1954 3.4579 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_10157680.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:00:05 Heat of formation + Delta-G solvation = -133.745448 kcal Electronic energy + Delta-G solvation = -35655.451414 eV Core-core repulsion = 31137.029823 eV Total energy + Delta-G solvation = -4518.421591 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.197 amu Computer time = 1.78 seconds Orbital eigenvalues (eV) -42.88920 -41.67903 -40.43450 -39.05025 -37.61818 -37.13965 -35.49607 -33.77581 -33.70140 -32.85832 -31.92849 -31.59977 -30.77326 -27.05968 -26.99209 -26.56340 -25.19870 -24.09970 -22.95873 -22.60969 -22.46280 -22.06705 -21.15889 -19.53870 -19.18944 -18.36006 -18.05989 -17.93154 -17.11078 -16.87521 -16.69791 -16.37560 -16.08702 -15.93598 -15.76341 -15.66642 -15.37511 -15.29933 -15.11393 -14.89859 -14.66206 -14.50749 -14.42013 -14.36075 -14.09214 -13.70562 -13.60957 -13.52879 -13.44537 -13.33700 -13.27830 -13.03890 -12.87575 -12.52710 -12.25230 -12.08458 -12.06002 -12.01674 -11.95897 -11.78122 -11.69828 -11.51891 -11.23664 -10.90816 -10.76732 -10.45663 -10.39570 -10.09191 -10.05527 -9.23515 -4.98537 0.25957 0.28783 1.34538 1.41527 1.48260 1.66237 2.00022 2.47329 2.64052 3.14334 3.36611 3.43634 3.47252 3.56940 3.66375 3.72485 3.79718 3.82609 3.87035 3.89272 3.93700 3.96967 4.08296 4.11979 4.16873 4.22564 4.26371 4.28312 4.35538 4.38486 4.48708 4.54362 4.58149 4.60450 4.63949 4.70251 4.70499 4.77513 4.84399 4.95520 4.98644 4.99629 5.02132 5.05932 5.08897 5.12772 5.16167 5.17734 5.24275 5.30309 5.33222 5.37025 5.48591 5.48719 5.49828 5.68985 6.25732 6.45467 6.79906 6.87197 7.10458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.064 3.936 3 O -0.315 6.315 4 C 0.122 3.878 5 C -0.201 4.201 6 C -0.071 4.071 7 C -0.161 4.161 8 C -0.075 4.075 9 O -0.559 6.559 10 Si 0.783 3.217 11 C -0.061 4.061 12 C -0.169 4.169 13 C 0.516 3.484 14 O -0.570 6.570 15 N -0.697 5.697 16 C 0.159 3.841 17 C -0.089 4.089 18 C -0.107 4.107 19 C -0.081 4.081 20 C -0.109 4.109 21 C -0.083 4.083 22 C -0.133 4.133 23 C 0.134 3.866 24 O -0.582 6.582 25 C -0.134 4.134 26 C -0.100 4.100 27 H 0.113 0.887 28 H 0.087 0.913 29 H 0.055 0.945 30 H 0.132 0.868 31 H 0.165 0.835 32 H 0.157 0.843 33 H 0.102 0.898 34 H 0.395 0.605 35 H -0.280 1.280 36 H -0.304 1.304 37 H 0.131 0.869 38 H 0.123 0.877 39 H 0.418 0.582 40 H 0.060 0.940 41 H 0.053 0.947 42 H 0.060 0.940 43 H 0.078 0.922 44 H 0.092 0.908 45 H 0.086 0.914 46 H 0.085 0.915 47 H 0.094 0.906 48 H 0.057 0.943 49 H 0.092 0.908 50 H 0.391 0.609 51 H 0.082 0.918 52 H 0.059 0.941 53 H 0.050 0.950 54 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.374 -9.935 -5.438 12.536 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.005 3.995 3 O -0.228 6.228 4 C 0.077 3.923 5 C -0.219 4.219 6 C -0.089 4.089 7 C -0.162 4.162 8 C -0.184 4.184 9 O -0.367 6.367 10 Si 0.689 3.311 11 C -0.079 4.079 12 C -0.187 4.187 13 C 0.302 3.698 14 O -0.448 6.448 15 N -0.352 5.352 16 C 0.055 3.945 17 C -0.109 4.109 18 C -0.145 4.145 19 C -0.100 4.100 20 C -0.146 4.146 21 C -0.102 4.102 22 C -0.172 4.172 23 C 0.094 3.906 24 O -0.391 6.391 25 C -0.172 4.172 26 C -0.139 4.139 27 H 0.131 0.869 28 H 0.106 0.894 29 H 0.075 0.925 30 H 0.150 0.850 31 H 0.182 0.818 32 H 0.174 0.826 33 H 0.119 0.881 34 H 0.245 0.755 35 H -0.207 1.207 36 H -0.232 1.232 37 H 0.149 0.851 38 H 0.141 0.859 39 H 0.258 0.742 40 H 0.079 0.921 41 H 0.072 0.928 42 H 0.078 0.922 43 H 0.096 0.904 44 H 0.110 0.890 45 H 0.104 0.896 46 H 0.104 0.896 47 H 0.113 0.887 48 H 0.076 0.924 49 H 0.110 0.890 50 H 0.241 0.759 51 H 0.101 0.899 52 H 0.078 0.922 53 H 0.069 0.931 54 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges -5.263 -8.369 -5.234 11.186 hybrid contribution -0.120 0.512 0.776 0.937 sum -5.383 -7.857 -4.458 10.516 Atomic orbital electron populations 1.22386 0.90494 1.05880 1.04310 1.22455 0.97167 0.82045 0.97873 1.86201 1.81437 1.27168 1.28031 1.19233 0.95759 0.92849 0.84504 1.21510 1.06230 1.02786 0.91412 1.21063 0.96507 0.93380 0.97921 1.20360 1.03517 0.96360 0.95957 1.25214 0.88721 1.05601 0.98883 1.86468 1.20654 1.37412 1.92178 0.93793 0.78490 0.85304 0.73550 1.20908 0.96535 0.99720 0.90732 1.20611 1.04513 0.94562 0.99056 1.20581 0.79018 0.82761 0.87454 1.90762 1.41546 1.67154 1.45378 1.45754 1.57316 1.07728 1.24369 1.20868 0.93105 0.93358 0.87199 1.21314 0.96046 0.97892 0.95614 1.21567 1.00467 0.95647 0.96810 1.21064 0.94971 0.96260 0.97664 1.21647 0.96078 0.99580 0.97311 1.21268 0.99373 0.93540 0.95997 1.22149 0.95895 1.01533 0.97584 1.21118 0.92740 0.91749 0.85036 1.86540 1.60523 1.45481 1.46558 1.22178 1.01988 0.98305 0.94732 1.21379 0.99341 0.95844 0.97306 0.86884 0.89401 0.92534 0.85042 0.81776 0.82553 0.88088 0.75539 1.20697 1.23242 0.85091 0.85877 0.74211 0.92145 0.92824 0.92159 0.90375 0.88972 0.89590 0.89649 0.88744 0.92386 0.88988 0.75896 0.89937 0.92184 0.93143 0.91933 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.22 9.12 71.98 0.66 1.88 16 2 C 0.06 -0.13 2.64 29.85 0.08 -0.05 16 3 O -0.31 -2.10 9.34 -73.44 -0.69 -2.78 16 4 C 0.12 0.46 6.60 22.51 0.15 0.61 16 5 C -0.20 0.57 8.24 22.37 0.18 0.76 16 6 C -0.07 0.25 8.66 22.25 0.19 0.44 16 7 C -0.16 -0.02 5.35 -19.85 -0.11 -0.13 16 8 C -0.07 0.04 2.80 71.23 0.20 0.24 16 9 O -0.56 -0.40 12.83 -148.98 -1.91 -2.31 16 10 Si 0.78 -2.87 29.80 68.60 2.04 -0.83 16 11 C -0.06 -0.21 9.68 22.25 0.22 0.01 16 12 C -0.17 -0.95 9.99 22.36 0.22 -0.73 16 13 C 0.52 1.61 7.14 87.66 0.63 2.24 16 14 O -0.57 -8.70 16.17 15.95 0.26 -8.45 16 15 N -0.70 3.13 4.19 -442.53 -1.86 1.28 16 16 C 0.16 -0.16 2.05 44.99 0.09 -0.07 16 17 C -0.09 -0.09 2.87 -10.79 -0.03 -0.12 16 18 C -0.11 0.45 5.03 30.59 0.15 0.61 16 19 C -0.08 0.62 3.19 -10.80 -0.03 0.58 16 20 C -0.11 1.16 5.02 30.59 0.15 1.31 16 21 C -0.08 0.54 2.88 -10.79 -0.03 0.51 16 22 C -0.13 0.52 4.81 30.60 0.15 0.67 16 23 C 0.13 -0.12 1.15 -10.80 -0.01 -0.13 16 24 O -0.58 -1.15 12.98 -148.98 -1.93 -3.08 16 25 C -0.13 0.63 4.81 30.60 0.15 0.78 16 26 C -0.10 -0.35 4.84 30.59 0.15 -0.20 16 27 H 0.11 -1.58 7.93 -2.39 -0.02 -1.60 16 28 H 0.09 -0.73 6.91 -2.39 -0.02 -0.74 16 29 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 30 H 0.13 -1.19 6.31 -2.38 -0.02 -1.21 16 31 H 0.16 -1.63 5.43 -2.91 -0.02 -1.65 16 32 H 0.16 -1.48 4.90 -2.91 -0.01 -1.49 16 33 H 0.10 0.12 7.96 -2.39 -0.02 0.10 16 34 H 0.39 -2.97 8.70 -74.06 -0.64 -3.62 16 35 H -0.28 -0.05 7.11 99.48 0.71 0.66 16 36 H -0.30 -1.39 7.11 99.48 0.71 -0.69 16 37 H 0.13 0.36 8.06 -2.91 -0.02 0.33 16 38 H 0.12 0.81 8.06 -2.91 -0.02 0.79 16 39 H 0.42 -5.15 6.65 -92.71 -0.62 -5.76 16 40 H 0.06 0.36 7.58 -2.39 -0.02 0.34 16 41 H 0.05 0.36 8.14 -2.39 -0.02 0.34 16 42 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 43 H 0.08 -0.53 7.60 -2.39 -0.02 -0.54 16 44 H 0.09 -0.88 8.14 -2.38 -0.02 -0.90 16 45 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 46 H 0.09 -1.24 6.51 -2.39 -0.02 -1.25 16 47 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 48 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 49 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 50 H 0.39 -2.41 9.05 -74.05 -0.67 -3.07 16 51 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 52 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 53 H 0.05 0.37 8.14 -2.39 -0.02 0.35 16 54 H 0.06 0.33 8.14 -2.39 -0.02 0.31 16 Total: 0.00 -28.06 405.75 -1.88 -29.94 By element: Atomic # 1 Polarization: -22.02 SS G_CDS: -0.95 Total: -22.97 kcal Atomic # 6 Polarization: 6.05 SS G_CDS: 3.15 Total: 9.20 kcal Atomic # 7 Polarization: 3.13 SS G_CDS: -1.86 Total: 1.28 kcal Atomic # 8 Polarization: -12.35 SS G_CDS: -4.27 Total: -16.62 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: 2.04 Total: -0.83 kcal Total: -28.06 -1.88 -29.94 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_10157680.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.805 kcal (2) G-P(sol) polarization free energy of solvation -28.060 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.865 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.881 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.940 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.745 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.78 seconds