Wall clock time and date at job start Thu Mar 4 2021 18:00:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86291 * 109.47346 * 2 1 4 4 C 1.50699 * 109.47169 * 120.00490 * 2 1 3 5 5 C 1.35456 * 126.06423 * 244.97282 * 4 2 1 6 6 N 1.35529 * 108.86975 * 180.02562 * 5 4 2 7 7 C 1.37653 * 108.64690 * 0.02562 * 6 5 4 8 8 C 1.46677 * 126.23428 * 180.02562 * 7 6 5 9 9 O 1.21690 * 120.00064 * 180.02562 * 8 7 6 10 10 N 1.34780 * 120.00091 * 0.02562 * 8 7 6 11 11 C 1.46500 * 119.99944 * 180.02562 * 10 8 7 12 12 C 1.52997 * 109.46927 * 155.00048 * 11 10 8 13 13 C 1.52997 * 109.47457 * 59.99484 * 12 11 10 14 14 C 1.53002 * 109.46817 * 60.00169 * 13 12 11 15 15 C 1.52996 * 109.47346 * 299.99737 * 14 13 12 16 16 C 1.53002 * 109.46891 * 59.99997 * 15 14 13 17 17 C 1.52997 * 109.46978 * 60.00410 * 16 15 14 18 18 C 1.53006 * 109.47164 * 299.99874 * 17 16 15 19 19 O 1.42895 * 109.47000 * 180.02562 * 18 17 16 20 20 C 1.52997 * 109.47127 * 59.99836 * 18 17 16 21 21 C 1.52999 * 109.46623 * 299.99900 * 18 17 16 22 22 C 1.37877 * 107.52981 * 0.25902 * 7 6 5 23 23 H 0.96705 * 113.99670 * 299.99752 * 1 2 3 24 24 H 1.09000 * 109.46692 * 240.00191 * 2 1 3 25 25 H 1.48503 * 110.00137 * 300.00083 * 3 2 1 26 26 H 1.48500 * 110.00009 * 61.31945 * 3 2 1 27 27 H 1.07999 * 125.56522 * 0.05347 * 5 4 2 28 28 H 0.97000 * 125.67883 * 179.97438 * 6 5 4 29 29 H 0.97001 * 119.99485 * 359.97438 * 10 8 7 30 30 H 1.09000 * 109.47381 * 34.99693 * 11 10 8 31 31 H 1.09001 * 109.46989 * 299.99155 * 12 11 10 32 32 H 1.08993 * 109.47194 * 299.99651 * 13 12 11 33 33 H 1.09002 * 109.46695 * 179.97438 * 13 12 11 34 34 H 1.09004 * 109.46733 * 179.97438 * 14 13 12 35 35 H 1.08992 * 109.47554 * 180.02562 * 15 14 13 36 36 H 1.09004 * 109.47108 * 300.00289 * 15 14 13 37 37 H 1.09002 * 109.47097 * 180.02562 * 16 15 14 38 38 H 1.09001 * 109.47375 * 59.99908 * 17 16 15 39 39 H 1.09000 * 109.47140 * 179.97438 * 17 16 15 40 40 H 0.96696 * 114.00485 * 299.99339 * 19 18 17 41 41 H 1.09002 * 109.47153 * 180.02562 * 20 18 17 42 42 H 1.09001 * 109.46832 * 60.00321 * 20 18 17 43 43 H 1.09000 * 109.47486 * 299.99829 * 21 18 17 44 44 H 1.09002 * 109.46716 * 179.97438 * 21 18 17 45 45 H 1.07999 * 126.45260 * 179.70793 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7563 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6339 -0.1501 2.2439 6 7 2.9061 -1.1032 3.1681 7 6 2.3697 -2.2967 2.7406 8 6 2.4378 -3.5803 3.4471 9 8 1.9215 -4.5698 2.9623 10 7 3.0723 -3.6639 4.6333 11 6 3.1408 -4.9461 5.3386 12 6 4.3612 -4.9559 6.2613 13 6 4.2405 -3.8198 7.2789 14 6 2.9708 -4.0129 8.1105 15 6 1.7504 -4.0030 7.1879 16 6 1.8711 -5.1391 6.1702 17 6 1.9426 -6.4781 6.9069 18 6 3.1631 -6.4881 7.8296 19 8 3.2301 -7.7389 8.5172 20 6 3.0424 -5.3520 8.8472 21 6 4.4327 -6.2951 6.9979 22 6 1.7613 -2.0668 1.5249 23 1 -0.3933 0.4417 0.7651 24 1 1.7922 -0.5138 -0.8900 25 1 1.5615 2.4678 -1.2085 26 1 1.5879 2.4585 1.2242 27 1 2.9285 0.8871 2.3056 28 1 3.3979 -0.9673 3.9931 29 1 3.4842 -2.8752 5.0195 30 1 3.2269 -5.7555 4.6136 31 1 5.2658 -4.8185 5.6688 32 1 4.1896 -2.8659 6.7541 33 1 5.1098 -3.8273 7.9365 34 1 2.8851 -3.2037 8.8358 35 1 0.8458 -4.1400 7.7803 36 1 1.6994 -3.0489 6.6631 37 1 1.0019 -5.1317 5.5126 38 1 1.0381 -6.6156 7.4994 39 1 2.0282 -7.2875 6.1819 40 1 2.4565 -7.9284 9.0655 41 1 3.9120 -5.3588 9.5043 42 1 2.1378 -5.4895 9.4397 43 1 4.5187 -7.1045 6.2730 44 1 5.3021 -6.3017 7.6553 45 1 1.2481 -2.7964 0.9161 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_10543058.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:00:10 Heat of formation + Delta-G solvation = -83.821793 kcal Electronic energy + Delta-G solvation = -28172.504109 eV Core-core repulsion = 24348.805030 eV Total energy + Delta-G solvation = -3823.699079 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.162 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.97291 -42.32895 -40.08038 -37.80333 -37.63979 -35.49020 -33.80289 -33.30533 -32.55243 -31.38259 -30.41173 -27.18454 -27.03229 -26.15837 -24.11984 -22.83155 -22.58519 -22.15851 -21.15841 -20.66974 -20.14565 -18.74614 -18.08718 -17.55302 -17.18061 -16.75425 -16.53932 -16.04543 -15.89737 -15.73840 -15.44095 -15.32235 -15.20942 -15.00968 -14.58821 -14.46613 -14.34110 -14.25756 -13.86130 -13.62416 -13.57597 -13.48328 -13.40908 -13.07337 -12.59510 -12.44965 -12.09740 -12.00511 -11.86883 -11.80560 -11.42605 -11.37412 -11.24837 -10.90816 -10.48006 -10.44681 -10.19197 -9.97045 -9.29922 -4.82780 0.35548 1.39973 1.55236 1.68479 1.89266 2.09523 2.13089 2.24840 3.10690 3.36798 3.40033 3.56349 3.74619 3.78130 3.84682 3.92478 3.98481 4.02454 4.09735 4.13998 4.16761 4.18573 4.21489 4.34026 4.35497 4.51304 4.56254 4.65279 4.72658 4.73857 4.82001 4.89053 4.96187 4.96691 4.99539 5.00365 5.02567 5.08622 5.11681 5.24264 5.28000 5.32750 5.42592 5.46155 5.58426 5.72626 6.33973 6.50969 6.63395 6.81521 7.04763 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.063 4.063 3 Si 0.790 3.210 4 C -0.223 4.223 5 C 0.062 3.938 6 N -0.514 5.514 7 C -0.068 4.068 8 C 0.588 3.412 9 O -0.576 6.576 10 N -0.704 5.704 11 C 0.159 3.841 12 C -0.082 4.082 13 C -0.111 4.111 14 C -0.081 4.081 15 C -0.105 4.105 16 C -0.090 4.090 17 C -0.135 4.135 18 C 0.134 3.866 19 O -0.579 6.579 20 C -0.134 4.134 21 C -0.100 4.100 22 C -0.105 4.105 23 H 0.384 0.616 24 H 0.107 0.893 25 H -0.315 1.315 26 H -0.265 1.265 27 H 0.215 0.785 28 H 0.437 0.563 29 H 0.410 0.590 30 H 0.064 0.936 31 H 0.094 0.906 32 H 0.082 0.918 33 H 0.083 0.917 34 H 0.091 0.909 35 H 0.064 0.936 36 H 0.069 0.931 37 H 0.052 0.948 38 H 0.075 0.925 39 H 0.055 0.945 40 H 0.390 0.610 41 H 0.073 0.927 42 H 0.070 0.930 43 H 0.058 0.942 44 H 0.080 0.920 45 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.555 7.241 6.455 11.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.171 4.171 3 Si 0.694 3.306 4 C -0.230 4.230 5 C -0.077 4.077 6 N -0.111 5.111 7 C -0.181 4.181 8 C 0.377 3.623 9 O -0.455 6.455 10 N -0.356 5.356 11 C 0.055 3.945 12 C -0.101 4.101 13 C -0.148 4.148 14 C -0.099 4.099 15 C -0.142 4.142 16 C -0.110 4.110 17 C -0.173 4.173 18 C 0.094 3.906 19 O -0.387 6.387 20 C -0.172 4.172 21 C -0.138 4.138 22 C -0.132 4.132 23 H 0.233 0.767 24 H 0.124 0.876 25 H -0.244 1.244 26 H -0.191 1.191 27 H 0.231 0.769 28 H 0.278 0.722 29 H 0.248 0.752 30 H 0.082 0.918 31 H 0.113 0.887 32 H 0.101 0.899 33 H 0.101 0.899 34 H 0.109 0.891 35 H 0.083 0.917 36 H 0.088 0.912 37 H 0.070 0.930 38 H 0.093 0.907 39 H 0.073 0.927 40 H 0.239 0.761 41 H 0.092 0.908 42 H 0.089 0.911 43 H 0.076 0.924 44 H 0.099 0.901 45 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 5.745 6.963 5.469 10.555 hybrid contribution -1.817 -0.500 0.758 2.031 sum 3.928 6.463 6.227 9.797 Atomic orbital electron populations 1.86574 1.19517 1.80569 1.49970 1.24780 0.82578 1.12370 0.97329 0.94238 0.89355 0.70264 0.76760 1.19863 1.08916 0.94154 1.00043 1.22382 1.00382 0.95861 0.89038 1.41837 1.42794 1.06376 1.20120 1.20089 1.11914 0.86706 0.99400 1.17281 0.77789 0.86549 0.80654 1.90853 1.48509 1.37947 1.68230 1.45756 1.56739 1.12933 1.20194 1.20886 0.95388 0.85318 0.92943 1.21272 0.97054 0.95591 0.96142 1.21656 0.98322 0.97502 0.97316 1.21061 0.94546 0.97289 0.97046 1.21530 0.98507 0.97648 0.96531 1.21303 0.97364 0.95620 0.96709 1.22151 0.99044 0.96950 0.99152 1.21128 0.94603 0.83554 0.91293 1.86521 1.47870 1.38712 1.65600 1.22172 1.02944 0.94491 0.97562 1.21401 0.97094 0.96774 0.98504 1.21225 1.00451 0.96638 0.94906 0.76690 0.87552 1.24371 1.19104 0.76871 0.72176 0.75234 0.91802 0.88734 0.89925 0.89859 0.89070 0.91704 0.91227 0.92960 0.90662 0.92668 0.76097 0.90826 0.91096 0.92353 0.90096 0.86029 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.80 12.88 -148.98 -1.92 -4.72 16 2 C -0.06 -0.02 3.02 71.24 0.22 0.19 16 3 Si 0.79 -3.75 30.60 68.60 2.10 -1.65 16 4 C -0.22 -0.01 5.43 -20.12 -0.11 -0.11 16 5 C 0.06 -0.44 10.45 83.48 0.87 0.43 16 6 N -0.51 3.81 5.99 -183.62 -1.10 2.71 16 7 C -0.07 -0.15 7.06 40.35 0.28 0.13 16 8 C 0.59 3.38 7.75 86.45 0.67 4.05 16 9 O -0.58 -9.24 16.55 -4.32 -0.07 -9.31 16 10 N -0.70 1.61 4.23 -446.50 -1.89 -0.28 16 11 C 0.16 0.03 2.05 44.99 0.09 0.12 16 12 C -0.08 0.36 2.88 -10.79 -0.03 0.33 16 13 C -0.11 0.96 5.02 30.59 0.15 1.11 16 14 C -0.08 0.55 3.19 -10.79 -0.03 0.51 16 15 C -0.10 0.42 5.04 30.59 0.15 0.57 16 16 C -0.09 -0.07 2.87 -10.79 -0.03 -0.10 16 17 C -0.13 -0.13 4.81 30.60 0.15 0.01 16 18 C 0.13 -0.08 1.15 -10.79 -0.01 -0.10 16 19 O -0.58 -1.16 12.98 -148.98 -1.93 -3.09 16 20 C -0.13 0.57 4.82 30.59 0.15 0.72 16 21 C -0.10 0.07 4.84 30.60 0.15 0.21 16 22 C -0.11 -0.65 10.59 22.57 0.24 -0.41 16 23 H 0.38 -0.59 8.70 -74.05 -0.64 -1.23 16 24 H 0.11 0.12 7.96 -2.39 -0.02 0.10 16 25 H -0.31 -1.54 7.11 99.48 0.71 -0.83 16 26 H -0.27 1.00 7.11 99.48 0.71 1.71 16 27 H 0.21 -3.19 6.21 -2.91 -0.02 -3.21 16 28 H 0.44 -6.72 8.19 -92.71 -0.76 -7.48 16 29 H 0.41 -3.97 6.00 -92.71 -0.56 -4.52 16 30 H 0.06 0.42 7.58 -2.39 -0.02 0.40 16 31 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.08 -1.06 6.51 -2.39 -0.02 -1.08 16 33 H 0.08 -0.78 8.14 -2.39 -0.02 -0.80 16 34 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 35 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 36 H 0.07 -0.35 7.60 -2.38 -0.02 -0.37 16 37 H 0.05 0.35 8.14 -2.39 -0.02 0.33 16 38 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 40 H 0.39 -1.87 9.05 -74.06 -0.67 -2.54 16 41 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 43 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 44 H 0.08 -0.09 8.14 -2.39 -0.02 -0.11 16 45 H 0.12 1.33 8.06 -2.91 -0.02 1.31 16 Total: 0.00 -25.53 343.82 -3.45 -28.98 By element: Atomic # 1 Polarization: -18.77 SS G_CDS: -1.54 Total: -20.31 kcal Atomic # 6 Polarization: 4.77 SS G_CDS: 2.91 Total: 7.68 kcal Atomic # 7 Polarization: 5.42 SS G_CDS: -2.99 Total: 2.43 kcal Atomic # 8 Polarization: -13.20 SS G_CDS: -3.92 Total: -17.12 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: 2.10 Total: -1.65 kcal Total: -25.53 -3.45 -28.98 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_10543058.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.839 kcal (2) G-P(sol) polarization free energy of solvation -25.534 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.373 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.448 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds