Wall clock time and date at job start Thu Mar 4 2021 18:00:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.37661 * 125.67817 * 2 1 4 4 C 1.46677 * 126.22801 * 359.96648 * 3 2 1 5 5 O 1.21692 * 120.00719 * 4.64744 * 4 3 2 6 6 N 1.34776 * 119.99617 * 184.64777 * 4 3 2 7 7 C 1.46505 * 120.00068 * 174.92042 * 6 4 3 8 8 C 1.53003 * 109.47122 * 155.00255 * 7 6 4 9 9 C 1.52992 * 109.47364 * 59.99874 * 8 7 6 10 10 C 1.53005 * 109.47231 * 59.99801 * 9 8 7 11 11 C 1.52993 * 109.47108 * 299.99960 * 10 9 8 12 12 C 1.53003 * 109.47289 * 60.00123 * 11 10 9 13 13 C 1.52995 * 109.46955 * 59.99597 * 12 11 10 14 14 C 1.53003 * 109.47452 * 300.00302 * 13 12 11 15 15 O 1.42904 * 109.46994 * 180.02562 * 14 13 12 16 16 C 1.52995 * 109.46983 * 60.00269 * 10 9 8 17 17 C 1.52999 * 109.46666 * 179.97438 * 8 7 6 18 18 C 1.37871 * 107.53299 * 179.70053 * 3 2 1 19 19 C 1.39837 * 107.08588 * 0.26931 * 18 3 2 20 20 C 1.35452 * 107.86216 * 359.97438 * 19 18 3 21 21 C 1.50706 * 125.56014 * 180.02562 * 20 19 18 22 22 O 1.42893 * 109.47058 * 149.97757 * 21 20 19 23 23 Si 1.86302 * 109.46979 * 29.97842 * 21 20 19 24 24 H 1.09005 * 109.47332 * 95.79129 * 1 2 3 25 25 H 1.09003 * 109.47220 * 215.78940 * 1 2 3 26 26 H 1.09004 * 109.47089 * 335.79415 * 1 2 3 27 27 H 0.97002 * 120.00101 * 354.91969 * 6 4 3 28 28 H 1.08995 * 109.47102 * 34.99664 * 7 6 4 29 29 H 1.08994 * 109.47065 * 299.99685 * 8 7 6 30 30 H 1.09000 * 109.47123 * 299.99986 * 9 8 7 31 31 H 1.09002 * 109.47319 * 180.02562 * 9 8 7 32 32 H 1.09004 * 109.46829 * 180.02562 * 10 9 8 33 33 H 1.09004 * 109.46888 * 179.97438 * 11 10 9 34 34 H 1.09000 * 109.47312 * 299.99856 * 11 10 9 35 35 H 1.09002 * 109.47111 * 179.97438 * 12 11 10 36 36 H 1.09004 * 109.47163 * 60.00243 * 13 12 11 37 37 H 1.09004 * 109.47216 * 180.02562 * 13 12 11 38 38 H 0.96695 * 113.99704 * 299.99776 * 15 14 13 39 39 H 1.09002 * 109.47532 * 59.99731 * 16 10 9 40 40 H 1.09004 * 109.47163 * 179.97438 * 16 10 9 41 41 H 1.08995 * 109.47307 * 59.99562 * 17 8 7 42 42 H 1.09002 * 109.47069 * 179.97438 * 17 8 7 43 43 H 1.08002 * 126.45444 * 180.22322 * 18 3 2 44 44 H 1.08000 * 126.06645 * 179.97438 * 19 18 3 45 45 H 1.08999 * 109.46765 * 269.98213 * 21 20 19 46 46 H 0.96698 * 114.00212 * 300.00180 * 22 21 20 47 47 H 1.48499 * 109.99660 * 180.02562 * 23 21 20 48 48 H 1.48502 * 110.00208 * 301.31813 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8123 2.5125 -0.0007 5 8 0.6248 2.7648 0.0840 6 7 2.7089 3.5142 -0.0952 7 6 2.2491 4.9007 -0.2081 8 6 3.3367 5.8426 0.3123 9 6 4.6099 5.6586 -0.5158 10 6 4.3154 5.9804 -1.9824 11 6 3.2279 5.0384 -2.5027 12 6 1.9546 5.2225 -1.6746 13 6 1.4745 6.6703 -1.7925 14 6 2.5620 7.6124 -1.2721 15 8 2.1132 8.9647 -1.3818 16 6 3.8353 7.4282 -2.1003 17 6 2.8567 7.2905 0.1938 18 6 3.5780 0.6889 0.0069 19 6 3.5521 -0.7093 0.0047 20 6 2.2555 -1.1008 -0.0026 21 6 1.7709 -2.5279 -0.0067 22 8 0.5096 -2.6044 0.6605 23 14 3.0072 -3.6060 0.8766 24 1 -0.3634 -0.1037 -1.0225 25 1 -0.3634 -0.8336 0.6010 26 1 -0.3633 0.9373 0.4214 27 1 3.6587 3.3173 -0.0885 28 1 1.3421 5.0318 0.3819 29 1 3.5465 5.6134 1.3570 30 1 4.9520 4.6271 -0.4318 31 1 5.3849 6.3293 -0.1448 32 1 5.2224 5.8488 -2.5724 33 1 3.0178 5.2680 -3.5474 34 1 3.5701 4.0069 -2.4187 35 1 1.1797 4.5516 -2.0457 36 1 1.2647 6.8996 -2.8373 37 1 0.5676 6.8016 -1.2022 38 1 1.9072 9.2386 -2.2859 39 1 4.6100 8.0994 -1.7295 40 1 3.6259 7.6577 -3.1451 41 1 1.9495 7.4220 0.7835 42 1 3.6313 7.9617 0.5649 43 1 4.4583 1.3145 0.0121 44 1 4.4132 -1.3611 0.0083 45 1 1.6593 -2.8707 -1.0353 46 1 0.5341 -2.3140 1.5825 47 1 2.5411 -5.0159 0.8790 48 1 4.3314 -3.5103 0.2113 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_10803936.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:00:18 Heat of formation + Delta-G solvation = -72.708627 kcal Electronic energy + Delta-G solvation = -30627.096063 eV Core-core repulsion = 26648.341268 eV Total energy + Delta-G solvation = -3978.754795 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.177 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.95895 -42.46722 -40.06445 -37.82500 -37.59745 -35.51557 -33.85418 -33.77188 -33.18121 -31.76605 -30.68035 -27.63669 -27.33898 -27.00316 -25.93314 -23.44566 -22.77982 -22.55668 -22.20872 -21.21508 -20.53049 -19.16871 -18.58658 -18.17019 -17.81565 -17.02299 -16.93431 -16.28142 -16.16086 -15.88491 -15.59393 -15.52243 -15.35945 -15.21374 -14.97851 -14.85167 -14.63101 -14.43540 -14.39438 -14.18629 -13.71430 -13.59280 -13.54969 -13.40425 -13.20605 -13.10275 -12.95542 -12.56483 -12.18373 -12.06274 -12.02031 -11.97313 -11.84076 -11.39552 -11.25349 -11.14894 -10.87023 -10.66067 -10.42884 -10.10835 -9.77238 -9.12262 -4.90728 0.34882 1.18051 1.48269 1.72935 1.75071 2.03025 2.29985 2.33428 3.13049 3.27489 3.39018 3.42647 3.55063 3.69251 3.80298 3.87116 3.94750 3.98652 4.05393 4.12117 4.16808 4.21426 4.24051 4.30898 4.31798 4.37077 4.40031 4.53496 4.54423 4.59256 4.67510 4.74211 4.77396 4.84724 4.98163 4.98931 5.01019 5.02986 5.03697 5.10493 5.12898 5.14380 5.30192 5.33131 5.36951 5.45442 5.49003 5.70967 5.96401 6.11554 6.45543 6.55418 6.83085 7.11325 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.401 5.401 3 C -0.080 4.080 4 C 0.588 3.412 5 O -0.586 6.586 6 N -0.696 5.696 7 C 0.162 3.838 8 C -0.081 4.081 9 C -0.112 4.112 10 C -0.081 4.081 11 C -0.106 4.106 12 C -0.088 4.088 13 C -0.133 4.133 14 C 0.135 3.865 15 O -0.578 6.578 16 C -0.134 4.134 17 C -0.099 4.099 18 C -0.124 4.124 19 C -0.212 4.212 20 C 0.014 3.986 21 C -0.058 4.058 22 O -0.554 6.554 23 Si 0.812 3.188 24 H 0.062 0.938 25 H 0.120 0.880 26 H 0.087 0.913 27 H 0.414 0.586 28 H 0.066 0.934 29 H 0.094 0.906 30 H 0.081 0.919 31 H 0.082 0.918 32 H 0.089 0.911 33 H 0.064 0.936 34 H 0.068 0.932 35 H 0.051 0.949 36 H 0.075 0.925 37 H 0.056 0.944 38 H 0.389 0.611 39 H 0.073 0.927 40 H 0.070 0.930 41 H 0.059 0.941 42 H 0.080 0.920 43 H 0.173 0.827 44 H 0.163 0.837 45 H 0.112 0.888 46 H 0.396 0.604 47 H -0.295 1.295 48 H -0.272 1.272 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.993 -0.744 1.059 6.131 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.074 5.074 3 C -0.193 4.193 4 C 0.377 3.623 5 O -0.468 6.468 6 N -0.347 5.347 7 C 0.057 3.943 8 C -0.100 4.100 9 C -0.149 4.149 10 C -0.099 4.099 11 C -0.143 4.143 12 C -0.108 4.108 13 C -0.172 4.172 14 C 0.095 3.905 15 O -0.387 6.387 16 C -0.171 4.171 17 C -0.137 4.137 18 C -0.150 4.150 19 C -0.235 4.235 20 C -0.105 4.105 21 C -0.167 4.167 22 O -0.362 6.362 23 Si 0.714 3.286 24 H 0.081 0.919 25 H 0.138 0.862 26 H 0.106 0.894 27 H 0.253 0.747 28 H 0.084 0.916 29 H 0.112 0.888 30 H 0.099 0.901 31 H 0.101 0.899 32 H 0.107 0.893 33 H 0.083 0.917 34 H 0.087 0.913 35 H 0.070 0.930 36 H 0.093 0.907 37 H 0.075 0.925 38 H 0.239 0.761 39 H 0.091 0.909 40 H 0.089 0.911 41 H 0.078 0.922 42 H 0.099 0.901 43 H 0.190 0.810 44 H 0.180 0.820 45 H 0.129 0.871 46 H 0.246 0.754 47 H -0.223 1.223 48 H -0.198 1.198 Dipole moment (debyes) X Y Z Total from point charges 5.189 -1.410 1.108 5.490 hybrid contribution -0.652 0.312 -1.454 1.623 sum 4.537 -1.098 -0.346 4.681 Atomic orbital electron populations 1.22567 0.75767 1.06246 1.03935 1.43899 1.07115 1.04401 1.51958 1.20173 0.91414 0.87247 1.20463 1.17218 0.85331 0.84328 0.75424 1.90764 1.17975 1.85298 1.52775 1.45572 1.10074 1.05310 1.73775 1.20879 0.97767 0.79794 0.95862 1.21261 0.94781 0.92946 1.01047 1.21657 0.96272 1.02999 0.94004 1.21048 0.98436 0.93547 0.96895 1.21538 0.94006 0.99956 0.98833 1.21296 0.98104 0.95936 0.95481 1.22144 0.98547 0.94498 1.01987 1.21110 0.92553 0.80978 0.95901 1.86523 1.88552 1.28717 1.34860 1.22170 0.97257 0.97467 1.00246 1.21385 1.01964 0.95853 0.94488 1.21638 0.94396 0.95524 1.03438 1.20907 0.95301 0.95746 1.11597 1.21400 0.91203 0.89451 1.08414 1.25230 0.94487 0.94221 1.02752 1.86452 1.30146 1.88878 1.30693 0.92939 0.73571 0.73977 0.88101 0.91884 0.86236 0.89400 0.74665 0.91561 0.88776 0.90076 0.89947 0.89257 0.91728 0.91310 0.93033 0.90652 0.92512 0.76111 0.90869 0.91087 0.92231 0.90146 0.80980 0.81988 0.87060 0.75383 1.22273 1.19798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.22 10.30 127.77 1.32 1.54 16 2 N -0.40 -1.78 3.16 -519.70 -1.64 -3.42 16 3 C -0.08 -0.35 6.89 40.35 0.28 -0.08 16 4 C 0.59 3.84 7.74 86.45 0.67 4.50 16 5 O -0.59 -8.15 14.17 -4.32 -0.06 -8.22 16 6 N -0.70 0.12 4.22 -446.49 -1.88 -1.77 16 7 C 0.16 0.17 2.10 44.99 0.09 0.26 16 8 C -0.08 0.25 2.88 -10.80 -0.03 0.22 16 9 C -0.11 0.73 5.02 30.59 0.15 0.89 16 10 C -0.08 0.41 3.19 -10.80 -0.03 0.38 16 11 C -0.11 0.26 5.03 30.59 0.15 0.41 16 12 C -0.09 -0.12 2.87 -10.79 -0.03 -0.15 16 13 C -0.13 -0.16 4.81 30.59 0.15 -0.01 16 14 C 0.13 -0.01 1.15 -10.81 -0.01 -0.02 16 15 O -0.58 -1.31 12.98 -148.98 -1.93 -3.24 16 16 C -0.13 0.44 4.82 30.59 0.15 0.59 16 17 C -0.10 0.00 4.84 30.58 0.15 0.15 16 18 C -0.12 0.08 10.36 22.57 0.23 0.32 16 19 C -0.21 0.12 9.37 22.01 0.21 0.33 16 20 C 0.01 0.01 6.15 41.35 0.25 0.27 16 21 C -0.06 0.10 2.99 71.24 0.21 0.31 16 22 O -0.55 1.04 10.11 -148.98 -1.51 -0.47 16 23 Si 0.81 -3.75 31.29 68.60 2.15 -1.60 16 24 H 0.06 0.32 8.14 -2.38 -0.02 0.30 16 25 H 0.12 -0.03 5.24 -2.39 -0.01 -0.04 16 26 H 0.09 0.68 5.92 -2.39 -0.01 0.66 16 27 H 0.41 -2.38 5.77 -92.71 -0.53 -2.92 16 28 H 0.07 0.45 7.51 -2.39 -0.02 0.43 16 29 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 30 H 0.08 -0.77 6.51 -2.39 -0.02 -0.79 16 31 H 0.08 -0.61 8.14 -2.39 -0.02 -0.63 16 32 H 0.09 -0.60 8.14 -2.39 -0.02 -0.61 16 33 H 0.06 -0.13 8.14 -2.38 -0.02 -0.15 16 34 H 0.07 -0.18 7.60 -2.39 -0.02 -0.20 16 35 H 0.05 0.34 8.14 -2.39 -0.02 0.32 16 36 H 0.07 -0.03 8.14 -2.38 -0.02 -0.05 16 37 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 38 H 0.39 -1.79 9.05 -74.06 -0.67 -2.46 16 39 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 40 H 0.07 -0.29 8.14 -2.38 -0.02 -0.31 16 41 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 42 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 43 H 0.17 -1.28 7.45 -2.91 -0.02 -1.30 16 44 H 0.16 -0.65 6.62 -2.91 -0.02 -0.67 16 45 H 0.11 -0.05 7.96 -2.39 -0.02 -0.07 16 46 H 0.40 -3.55 8.29 -74.06 -0.61 -4.16 16 47 H -0.30 -0.72 7.11 99.48 0.71 -0.02 16 48 H -0.27 0.33 6.76 99.48 0.67 1.00 16 Total: 0.00 -19.01 355.93 -1.79 -20.79 By element: Atomic # 1 Polarization: -11.17 SS G_CDS: -0.81 Total: -11.98 kcal Atomic # 6 Polarization: 5.99 SS G_CDS: 3.91 Total: 9.90 kcal Atomic # 7 Polarization: -1.66 SS G_CDS: -3.53 Total: -5.19 kcal Atomic # 8 Polarization: -8.42 SS G_CDS: -3.50 Total: -11.92 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: 2.15 Total: -1.60 kcal Total: -19.01 -1.79 -20.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_10803936.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.916 kcal (2) G-P(sol) polarization free energy of solvation -19.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.922 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.786 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.793 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds