Wall clock time and date at job start Thu Mar 4 2021 18:00:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.46734 * 2 1 4 4 C 1.50695 * 109.47551 * 120.00410 * 2 1 3 5 5 C 1.36447 * 120.29742 * 119.95376 * 4 2 1 6 6 C 1.40092 * 119.25679 * 179.97438 * 5 4 2 7 7 C 1.40857 * 132.86917 * 180.02562 * 6 5 4 8 8 C 1.46561 * 126.57768 * 0.02562 * 7 6 5 9 9 O 1.21726 * 120.00207 * 359.97438 * 8 7 6 10 10 N 1.34780 * 119.99931 * 180.02562 * 8 7 6 11 11 C 1.46500 * 119.99944 * 180.02562 * 10 8 7 12 12 C 1.52997 * 109.46927 * 155.00048 * 11 10 8 13 13 C 1.52997 * 109.47457 * 59.99484 * 12 11 10 14 14 C 1.53002 * 109.46817 * 60.00169 * 13 12 11 15 15 C 1.52996 * 109.47346 * 299.99737 * 14 13 12 16 16 C 1.53002 * 109.46891 * 59.99997 * 15 14 13 17 17 C 1.52997 * 109.46978 * 60.00410 * 16 15 14 18 18 C 1.53006 * 109.47164 * 299.99874 * 17 16 15 19 19 O 1.42895 * 109.47000 * 180.02562 * 18 17 16 20 20 C 1.52997 * 109.47127 * 59.99836 * 18 17 16 21 21 C 1.52999 * 109.46623 * 299.99900 * 18 17 16 22 22 C 1.40550 * 106.83890 * 180.26469 * 7 6 5 23 23 N 1.30744 * 108.74627 * 359.55860 * 22 7 6 24 24 N 1.36582 * 120.22977 * 0.02782 * 6 5 4 25 25 C 1.36243 * 120.07722 * 359.97438 * 24 6 5 26 26 C 1.35188 * 120.70846 * 0.02562 * 25 24 6 27 27 H 0.96700 * 113.99690 * 299.98968 * 1 2 3 28 28 H 1.09002 * 109.46947 * 240.00189 * 2 1 3 29 29 H 1.48500 * 109.99786 * 178.68405 * 3 2 1 30 30 H 1.48499 * 110.00300 * 299.99942 * 3 2 1 31 31 H 1.08000 * 120.37331 * 0.04835 * 5 4 2 32 32 H 0.97001 * 119.99485 * 359.97438 * 10 8 7 33 33 H 1.09000 * 109.47381 * 34.99693 * 11 10 8 34 34 H 1.09001 * 109.46989 * 299.99155 * 12 11 10 35 35 H 1.08993 * 109.47194 * 299.99651 * 13 12 11 36 36 H 1.09002 * 109.46695 * 179.97438 * 13 12 11 37 37 H 1.09004 * 109.46733 * 179.97438 * 14 13 12 38 38 H 1.08992 * 109.47554 * 180.02562 * 15 14 13 39 39 H 1.09004 * 109.47108 * 300.00289 * 15 14 13 40 40 H 1.09002 * 109.47097 * 180.02562 * 16 15 14 41 41 H 1.09001 * 109.47375 * 59.99908 * 17 16 15 42 42 H 1.09000 * 109.47140 * 179.97438 * 17 16 15 43 43 H 0.96696 * 114.00485 * 299.99339 * 19 18 17 44 44 H 1.09002 * 109.47153 * 180.02562 * 20 18 17 45 45 H 1.09001 * 109.46832 * 60.00321 * 20 18 17 46 46 H 1.09000 * 109.47486 * 299.99829 * 21 18 17 47 47 H 1.09002 * 109.46716 * 179.97438 * 21 18 17 48 48 H 1.08001 * 125.62871 * 179.73993 * 22 7 6 49 49 H 1.08006 * 119.64656 * 179.97438 * 25 24 6 50 50 H 1.08001 * 119.84002 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 2.7155 -1.8209 1.1121 6 6 3.1710 -2.4639 2.2703 7 6 3.9749 -3.6011 2.4819 8 6 4.5752 -4.4507 1.4495 9 8 4.3953 -4.1975 0.2726 10 7 5.3255 -5.5129 1.8033 11 6 5.9260 -6.3618 0.7714 12 6 7.1639 -7.0579 1.3404 13 6 6.7592 -7.9198 2.5380 14 6 5.7436 -8.9723 2.0888 15 6 4.5056 -8.2763 1.5199 16 6 4.9103 -7.4143 0.3223 17 6 5.5374 -8.3010 -0.7554 18 6 6.7755 -8.9971 -0.1865 19 8 7.3614 -9.8247 -1.1932 20 6 6.3707 -9.8589 1.0111 21 6 7.7910 -7.9446 0.2626 22 6 4.0862 -3.7678 3.8731 23 7 3.4188 -2.8123 4.4655 24 7 2.8317 -1.9826 3.5027 25 6 2.0483 -0.8732 3.6104 26 6 1.5974 -0.2365 2.5064 27 1 -0.3933 0.4416 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 3.5345 1.7704 0.0320 30 1 1.5614 2.4679 -1.2085 31 1 2.9830 -2.1991 0.1365 32 1 5.4685 -5.7148 2.7413 33 1 6.2144 -5.7478 -0.0818 34 1 7.8875 -6.3081 1.6603 35 1 6.3125 -7.2881 3.3058 36 1 7.6412 -8.4160 2.9430 37 1 5.4556 -9.5866 2.9420 38 1 3.7819 -9.0260 1.2003 39 1 4.0588 -7.6446 2.2877 40 1 4.0284 -6.9181 -0.0828 41 1 4.8139 -9.0508 -1.0754 42 1 5.8254 -7.6870 -1.6088 43 1 6.7729 -10.5162 -1.5257 44 1 7.2528 -10.3545 1.4168 45 1 5.6472 -10.6087 0.6911 46 1 8.0794 -7.3305 -0.5906 47 1 8.6728 -8.4405 0.6684 48 1 4.6352 -4.5536 4.3706 49 1 1.7839 -0.4988 4.5884 50 1 0.9769 0.6415 2.6081 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_11618758.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:00:21 Heat of formation + Delta-G solvation = -23.426037 kcal Electronic energy + Delta-G solvation = -34787.144299 eV Core-core repulsion = 30360.422225 eV Total energy + Delta-G solvation = -4426.722074 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.173 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -43.34202 -42.80250 -40.20162 -39.29703 -37.59666 -37.21776 -35.32086 -34.24243 -33.76898 -33.14298 -32.10274 -31.35192 -30.05898 -27.50546 -27.00429 -26.52781 -24.91629 -23.86043 -23.06746 -22.78739 -22.53674 -22.18781 -21.01844 -19.31230 -18.77121 -18.44189 -18.06524 -17.79782 -17.42527 -17.02591 -16.80026 -16.47684 -16.05236 -15.93318 -15.83661 -15.48826 -15.41586 -15.20317 -15.19596 -14.94677 -14.52903 -14.40325 -14.30817 -14.17264 -14.00847 -13.58691 -13.53885 -13.51419 -13.39542 -13.14762 -13.04101 -12.57023 -12.40671 -12.24174 -12.06110 -12.00059 -11.96969 -11.84033 -11.58441 -11.38720 -11.24311 -11.01669 -10.84307 -10.79575 -10.42674 -10.27372 -10.04473 -8.81540 -5.08887 -0.58310 -0.11765 0.99291 1.04177 1.18952 1.66595 1.94932 2.06846 2.16815 2.46368 3.05708 3.14032 3.22656 3.40345 3.43324 3.45298 3.58975 3.73791 3.80241 3.85862 3.86460 3.95094 3.95585 4.06085 4.11223 4.16851 4.18333 4.22488 4.24125 4.34865 4.36957 4.39569 4.55603 4.59883 4.62747 4.68000 4.75553 4.77605 4.86258 4.98723 4.99686 5.01628 5.03603 5.09058 5.10308 5.14078 5.15283 5.26877 5.30424 5.35644 5.39519 5.46777 5.53370 5.66659 6.27595 6.57317 6.75832 6.82474 7.26784 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.077 4.077 3 Si 0.817 3.183 4 C -0.053 4.053 5 C -0.136 4.136 6 C 0.151 3.849 7 C -0.346 4.346 8 C 0.598 3.402 9 O -0.595 6.595 10 N -0.705 5.705 11 C 0.163 3.837 12 C -0.082 4.082 13 C -0.111 4.111 14 C -0.081 4.081 15 C -0.105 4.105 16 C -0.089 4.089 17 C -0.134 4.134 18 C 0.135 3.865 19 O -0.579 6.579 20 C -0.133 4.133 21 C -0.099 4.099 22 C 0.131 3.869 23 N -0.336 5.336 24 N -0.273 5.273 25 C 0.115 3.885 26 C -0.146 4.146 27 H 0.401 0.599 28 H 0.104 0.896 29 H -0.303 1.303 30 H -0.290 1.290 31 H 0.135 0.865 32 H 0.411 0.589 33 H 0.060 0.940 34 H 0.092 0.908 35 H 0.082 0.918 36 H 0.082 0.918 37 H 0.091 0.909 38 H 0.064 0.936 39 H 0.069 0.931 40 H 0.050 0.950 41 H 0.075 0.925 42 H 0.054 0.946 43 H 0.389 0.611 44 H 0.073 0.927 45 H 0.071 0.929 46 H 0.057 0.943 47 H 0.080 0.920 48 H 0.233 0.767 49 H 0.215 0.785 50 H 0.223 0.777 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.845 2.342 7.859 8.680 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.185 4.185 3 Si 0.721 3.279 4 C -0.059 4.059 5 C -0.156 4.156 6 C 0.030 3.970 7 C -0.361 4.361 8 C 0.388 3.612 9 O -0.478 6.478 10 N -0.356 5.356 11 C 0.058 3.942 12 C -0.101 4.101 13 C -0.149 4.149 14 C -0.099 4.099 15 C -0.143 4.143 16 C -0.108 4.108 17 C -0.172 4.172 18 C 0.095 3.905 19 O -0.387 6.387 20 C -0.171 4.171 21 C -0.137 4.137 22 C -0.049 4.049 23 N -0.156 5.156 24 N -0.036 5.036 25 C -0.010 4.010 26 C -0.166 4.166 27 H 0.252 0.748 28 H 0.121 0.879 29 H -0.231 1.231 30 H -0.217 1.217 31 H 0.153 0.847 32 H 0.249 0.751 33 H 0.078 0.922 34 H 0.110 0.890 35 H 0.100 0.900 36 H 0.100 0.900 37 H 0.109 0.891 38 H 0.083 0.917 39 H 0.088 0.912 40 H 0.069 0.931 41 H 0.093 0.907 42 H 0.072 0.928 43 H 0.239 0.761 44 H 0.092 0.908 45 H 0.090 0.910 46 H 0.075 0.925 47 H 0.098 0.902 48 H 0.249 0.751 49 H 0.231 0.769 50 H 0.239 0.761 Dipole moment (debyes) X Y Z Total from point charges -2.192 3.572 7.443 8.542 hybrid contribution 0.089 -1.626 -1.449 2.180 sum -2.103 1.946 5.994 6.644 Atomic orbital electron populations 1.86586 1.15888 1.82300 1.50745 1.25334 0.86015 1.11252 0.95928 0.93872 0.76850 0.72160 0.85012 1.20771 0.94107 0.93485 0.97585 1.20628 1.01101 0.96656 0.97191 1.19456 0.95987 0.94660 0.86944 1.19696 1.17662 1.04400 0.94333 1.17086 0.77425 0.79801 0.86882 1.90756 1.63124 1.73471 1.20428 1.45609 1.51806 1.27570 1.10658 1.20807 0.92653 0.90276 0.90498 1.21268 0.95433 0.97458 0.95969 1.21654 0.99778 0.97123 0.96306 1.21054 0.94614 0.96360 0.97876 1.21532 0.97598 0.98441 0.96712 1.21287 0.97652 0.95622 0.96280 1.22145 0.97809 0.99397 0.97850 1.21116 0.91758 0.90243 0.87396 1.86518 1.45420 1.48858 1.57878 1.22165 1.01355 0.97893 0.95655 1.21394 0.97960 0.96074 0.98250 1.24547 0.93551 0.95850 0.91000 1.77551 1.19687 1.07020 1.11335 1.46377 1.32473 1.19785 1.05014 1.22489 0.90563 0.83847 1.04104 1.21357 1.03503 1.03594 0.88158 0.74763 0.87876 1.23134 1.21672 0.84707 0.75078 0.92174 0.89010 0.89968 0.89958 0.89110 0.91713 0.91245 0.93114 0.90659 0.92766 0.76108 0.90832 0.91023 0.92452 0.90155 0.75134 0.76851 0.76089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.70 12.88 -148.98 -1.92 -0.22 16 2 C -0.08 0.17 2.84 71.23 0.20 0.37 16 3 Si 0.82 -3.96 31.96 68.60 2.19 -1.77 16 4 C -0.05 0.06 4.53 -19.82 -0.09 -0.03 16 5 C -0.14 -0.93 9.35 22.30 0.21 -0.72 16 6 C 0.15 1.19 6.76 39.49 0.27 1.45 16 7 C -0.35 -2.51 6.17 -19.90 -0.12 -2.63 16 8 C 0.60 5.65 7.75 86.41 0.67 6.32 16 9 O -0.60 -10.60 15.37 -4.43 -0.07 -10.67 16 10 N -0.70 -1.30 4.22 -446.58 -1.89 -3.19 16 11 C 0.16 0.52 2.05 44.99 0.09 0.61 16 12 C -0.08 0.12 2.88 -10.79 -0.03 0.09 16 13 C -0.11 0.61 5.02 30.59 0.15 0.77 16 14 C -0.08 0.33 3.19 -10.79 -0.03 0.30 16 15 C -0.11 0.13 5.04 30.59 0.15 0.28 16 16 C -0.09 -0.30 2.87 -10.79 -0.03 -0.33 16 17 C -0.13 -0.39 4.81 30.60 0.15 -0.24 16 18 C 0.14 0.17 1.15 -10.79 -0.01 0.16 16 19 O -0.58 -2.00 12.98 -148.98 -1.93 -3.94 16 20 C -0.13 0.30 4.82 30.59 0.15 0.45 16 21 C -0.10 -0.16 4.84 30.60 0.15 -0.01 16 22 C 0.13 0.20 11.44 85.42 0.98 1.18 16 23 N -0.34 -1.52 12.57 -56.62 -0.71 -2.23 16 24 N -0.27 -0.97 3.86 -187.26 -0.72 -1.69 16 25 C 0.12 -0.62 11.17 83.30 0.93 0.31 16 26 C -0.15 1.29 8.38 22.03 0.18 1.48 16 27 H 0.40 -5.77 8.09 -74.06 -0.60 -6.37 16 28 H 0.10 0.16 7.71 -2.39 -0.02 0.15 16 29 H -0.30 -1.02 7.11 99.48 0.71 -0.32 16 30 H -0.29 -0.68 7.11 99.48 0.71 0.03 16 31 H 0.14 1.50 7.01 -2.91 -0.02 1.47 16 32 H 0.41 -1.94 5.79 -92.71 -0.54 -2.48 16 33 H 0.06 0.57 7.58 -2.39 -0.02 0.55 16 34 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 35 H 0.08 -0.73 6.51 -2.39 -0.02 -0.74 16 36 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 37 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 38 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 39 H 0.07 -0.11 7.60 -2.38 -0.02 -0.13 16 40 H 0.05 0.46 8.14 -2.39 -0.02 0.44 16 41 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 42 H 0.05 0.35 8.14 -2.39 -0.02 0.33 16 43 H 0.39 -1.36 9.05 -74.06 -0.67 -2.03 16 44 H 0.07 -0.15 8.14 -2.39 -0.02 -0.16 16 45 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 46 H 0.06 0.27 8.14 -2.39 -0.02 0.25 16 47 H 0.08 0.08 8.14 -2.39 -0.02 0.06 16 48 H 0.23 -1.88 7.46 -2.91 -0.02 -1.91 16 49 H 0.21 -2.79 8.06 -2.91 -0.02 -2.82 16 50 H 0.22 -4.60 7.31 -2.91 -0.02 -4.62 16 Total: 0.00 -31.98 384.83 -1.85 -33.83 By element: Atomic # 1 Polarization: -19.17 SS G_CDS: -0.76 Total: -19.93 kcal Atomic # 6 Polarization: 5.85 SS G_CDS: 3.96 Total: 9.81 kcal Atomic # 7 Polarization: -3.79 SS G_CDS: -3.32 Total: -7.11 kcal Atomic # 8 Polarization: -10.90 SS G_CDS: -3.92 Total: -14.82 kcal Atomic # 14 Polarization: -3.96 SS G_CDS: 2.19 Total: -1.77 kcal Total: -31.98 -1.85 -33.83 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_11618758.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.400 kcal (2) G-P(sol) polarization free energy of solvation -31.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.578 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.848 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.826 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds