Wall clock time and date at job start Thu Mar 4 2021 18:00:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35660 * 116.99925 * 2 1 4 4 C 1.38402 * 120.12072 * 0.02562 * 3 2 1 5 5 C 1.38725 * 120.03116 * 179.97438 * 4 3 2 6 6 O 1.35713 * 119.86147 * 180.02562 * 5 4 3 7 7 C 1.42895 * 116.99912 * 359.97438 * 6 5 4 8 8 C 1.39144 * 120.27404 * 0.04443 * 5 4 3 9 9 C 1.50699 * 119.88162 * 179.97438 * 8 5 4 10 10 O 1.42897 * 109.46901 * 284.97836 * 9 8 5 11 11 Si 1.86300 * 109.47396 * 164.97769 * 9 8 5 12 12 C 1.37586 * 120.24209 * 359.95636 * 8 5 4 13 13 C 1.39825 * 119.96078 * 0.02562 * 12 8 5 14 14 C 1.47304 * 120.12930 * 179.97438 * 13 12 8 15 15 O 1.21627 * 119.99396 * 180.02562 * 14 13 12 16 16 N 1.34773 * 120.00543 * 0.02562 * 14 13 12 17 17 C 1.46498 * 119.99903 * 180.02562 * 16 14 13 18 18 C 1.52998 * 109.46728 * 274.99551 * 17 16 14 19 19 C 1.53001 * 109.47364 * 300.00199 * 18 17 16 20 20 C 1.53002 * 109.47199 * 299.99985 * 19 18 17 21 21 C 1.52998 * 109.46951 * 59.99762 * 20 19 18 22 22 C 1.53001 * 109.47364 * 300.00137 * 21 20 19 23 23 C 1.52997 * 109.46883 * 299.99835 * 22 21 20 24 24 C 1.53000 * 109.47159 * 60.00273 * 23 22 21 25 25 O 1.42900 * 109.47224 * 180.02562 * 24 23 22 26 26 C 1.53001 * 109.47000 * 299.99655 * 24 23 22 27 27 C 1.53002 * 109.47012 * 180.02562 * 18 17 16 28 28 H 1.09003 * 109.47043 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47009 * 299.99395 * 1 2 3 30 30 H 1.09003 * 109.47722 * 59.99594 * 1 2 3 31 31 H 1.08001 * 119.98234 * 359.97438 * 4 3 2 32 32 H 1.08995 * 109.47132 * 299.99713 * 7 6 5 33 33 H 1.08994 * 109.47365 * 60.00232 * 7 6 5 34 34 H 1.09006 * 109.46901 * 180.02562 * 7 6 5 35 35 H 1.09001 * 109.46709 * 44.97569 * 9 8 5 36 36 H 0.96704 * 114.00021 * 179.97438 * 10 9 8 37 37 H 1.48505 * 109.99837 * 59.99729 * 11 9 8 38 38 H 1.48499 * 110.00162 * 181.32019 * 11 9 8 39 39 H 1.08001 * 120.02130 * 180.29945 * 12 8 5 40 40 H 0.97004 * 119.99636 * 359.97438 * 16 14 13 41 41 H 1.08996 * 109.47321 * 34.99721 * 17 16 14 42 42 H 1.09003 * 109.47585 * 60.00591 * 18 17 16 43 43 H 1.09004 * 109.47249 * 180.02562 * 19 18 17 44 44 H 1.08998 * 109.47165 * 60.00167 * 19 18 17 45 45 H 1.09001 * 109.46916 * 180.02562 * 20 19 18 46 46 H 1.08999 * 109.47138 * 179.97438 * 21 20 19 47 47 H 1.09006 * 109.46825 * 59.99881 * 21 20 19 48 48 H 1.08997 * 109.46614 * 179.97438 * 22 21 20 49 49 H 1.08996 * 109.46844 * 179.97438 * 23 22 21 50 50 H 1.08994 * 109.47288 * 299.99930 * 23 22 21 51 51 H 0.96701 * 114.00160 * 59.99329 * 25 24 23 52 52 H 1.08999 * 109.47465 * 300.00388 * 26 24 23 53 53 H 1.09004 * 109.47249 * 180.02562 * 26 24 23 54 54 H 1.08995 * 109.47608 * 300.00372 * 27 18 17 55 55 H 1.09004 * 109.47249 * 179.97438 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2935 2.3711 0.0005 5 6 1.9252 3.6061 0.0011 6 8 1.1851 4.7437 0.0021 7 6 -0.2359 4.5931 0.0021 8 6 3.3145 3.6834 0.0001 9 6 3.9915 5.0298 0.0002 10 8 3.8935 5.6122 -1.3011 11 14 5.7864 4.8224 0.4541 12 6 4.0724 2.5352 -0.0004 13 6 3.4461 1.2851 -0.0006 14 6 4.2539 0.0533 -0.0017 15 8 3.7065 -1.0328 -0.0024 16 7 5.5995 0.1298 -0.0021 17 6 6.4028 -1.0953 -0.0038 18 6 6.5778 -1.5923 1.4325 19 6 7.2866 -0.5188 2.2609 20 6 8.6593 -0.2277 1.6511 21 6 8.4843 0.2693 0.2147 22 6 7.7755 -0.8043 -0.6136 23 6 8.6145 -2.0836 -0.6153 24 6 8.7895 -2.5807 0.8211 25 8 9.5736 -3.7754 0.8195 26 6 9.4983 -1.5072 1.6494 27 6 7.4173 -2.8714 1.4309 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 0.2148 2.3165 0.0005 32 1 -0.5431 4.0447 -0.8884 33 1 -0.5431 4.0431 0.8915 34 1 -0.7056 5.5768 0.0025 35 1 3.5057 5.6807 0.7271 36 1 4.3086 6.4825 -1.3747 37 1 6.4600 3.9368 -0.5295 38 1 6.4579 6.1465 0.4887 39 1 5.1505 2.5993 0.0038 40 1 6.0360 0.9961 -0.0020 41 1 5.8978 -1.8601 -0.5939 42 1 5.5999 -1.7998 1.8671 43 1 7.4117 -0.8731 3.2841 44 1 6.6889 0.3927 2.2621 45 1 9.1644 0.5367 2.2415 46 1 9.4622 0.4771 -0.2196 47 1 7.8865 1.1808 0.2160 48 1 7.6504 -0.4499 -1.6368 49 1 8.1094 -2.8485 -1.2051 50 1 9.5924 -1.8763 -1.0497 51 1 10.4587 -3.6644 0.4461 52 1 10.4762 -1.2998 1.2150 53 1 9.6234 -1.8615 2.6726 54 1 6.9128 -3.6364 0.8407 55 1 7.5424 -3.2253 2.4543 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_12297780.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:00:29 Heat of formation + Delta-G solvation = -161.888140 kcal Electronic energy + Delta-G solvation = -39547.088622 eV Core-core repulsion = 34708.764481 eV Total energy + Delta-G solvation = -4838.324141 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.197 amu Computer time = 1.80 seconds Orbital eigenvalues (eV) -42.85192 -41.99037 -40.40526 -39.78009 -38.40787 -37.55657 -37.15274 -35.31670 -33.73030 -33.21509 -32.38517 -31.97218 -30.70088 -28.98679 -28.22626 -26.96148 -26.69460 -26.05046 -24.53734 -23.01206 -22.75211 -22.43927 -22.07115 -21.16664 -20.06038 -19.04429 -18.54690 -18.52064 -18.14357 -17.79781 -17.26352 -17.09436 -16.61634 -16.54203 -16.42756 -16.05540 -15.82374 -15.78318 -15.56154 -15.46281 -15.34360 -15.16759 -14.90260 -14.47578 -14.39669 -14.27974 -14.15688 -13.86225 -13.69665 -13.58668 -13.49170 -13.41885 -13.29661 -12.98404 -12.79455 -12.55400 -12.51831 -12.47196 -12.13901 -12.01843 -11.93181 -11.87607 -11.73890 -11.63760 -11.47700 -11.19852 -10.92181 -10.72078 -10.41596 -10.40582 -10.03885 -9.91843 -9.19707 -4.91804 -0.26583 0.06572 1.29836 1.60010 1.72353 1.93455 2.07205 2.10763 2.17322 2.57881 3.18350 3.33299 3.41320 3.47709 3.51714 3.68024 3.71282 3.82757 3.86543 3.93333 4.00154 4.08800 4.13459 4.14698 4.17341 4.20177 4.22847 4.26479 4.26870 4.28051 4.29423 4.29972 4.42898 4.44785 4.59359 4.63199 4.65503 4.66906 4.73118 4.76027 4.81364 4.86230 4.91998 5.02499 5.03106 5.04694 5.06611 5.09857 5.15769 5.18541 5.28281 5.34939 5.39324 5.43066 5.51501 5.55875 6.02239 6.27669 6.51588 6.65004 6.90150 7.24202 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.304 6.304 3 C 0.218 3.782 4 C -0.310 4.310 5 C 0.214 3.786 6 O -0.311 6.311 7 C 0.012 3.988 8 C -0.161 4.161 9 C -0.076 4.076 10 O -0.556 6.556 11 Si 0.753 3.247 12 C 0.000 4.000 13 C -0.227 4.227 14 C 0.565 3.435 15 O -0.562 6.562 16 N -0.711 5.711 17 C 0.160 3.840 18 C -0.087 4.087 19 C -0.110 4.110 20 C -0.081 4.081 21 C -0.113 4.113 22 C -0.087 4.087 23 C -0.131 4.131 24 C 0.135 3.865 25 O -0.580 6.580 26 C -0.133 4.133 27 C -0.099 4.099 28 H 0.112 0.888 29 H 0.074 0.926 30 H 0.069 0.931 31 H 0.165 0.835 32 H 0.064 0.936 33 H 0.073 0.927 34 H 0.121 0.879 35 H 0.083 0.917 36 H 0.392 0.608 37 H -0.267 1.267 38 H -0.281 1.281 39 H 0.157 0.843 40 H 0.407 0.593 41 H 0.062 0.938 42 H 0.057 0.943 43 H 0.066 0.934 44 H 0.076 0.924 45 H 0.096 0.904 46 H 0.086 0.914 47 H 0.075 0.925 48 H 0.085 0.915 49 H 0.058 0.942 50 H 0.090 0.910 51 H 0.391 0.609 52 H 0.081 0.919 53 H 0.064 0.936 54 H 0.051 0.949 55 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.072 6.951 2.403 7.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.215 6.215 3 C 0.168 3.832 4 C -0.330 4.330 5 C 0.166 3.834 6 O -0.222 6.222 7 C -0.082 4.082 8 C -0.162 4.162 9 C -0.183 4.183 10 O -0.365 6.365 11 Si 0.656 3.344 12 C -0.018 4.018 13 C -0.231 4.231 14 C 0.354 3.646 15 O -0.441 6.441 16 N -0.364 5.364 17 C 0.056 3.944 18 C -0.106 4.106 19 C -0.147 4.147 20 C -0.099 4.099 21 C -0.150 4.150 22 C -0.106 4.106 23 C -0.170 4.170 24 C 0.094 3.906 25 O -0.389 6.389 26 C -0.170 4.170 27 C -0.137 4.137 28 H 0.131 0.869 29 H 0.092 0.908 30 H 0.088 0.912 31 H 0.182 0.818 32 H 0.083 0.917 33 H 0.091 0.909 34 H 0.139 0.861 35 H 0.101 0.899 36 H 0.242 0.758 37 H -0.193 1.193 38 H -0.208 1.208 39 H 0.174 0.826 40 H 0.245 0.755 41 H 0.080 0.920 42 H 0.076 0.924 43 H 0.085 0.915 44 H 0.095 0.905 45 H 0.114 0.886 46 H 0.104 0.896 47 H 0.093 0.907 48 H 0.103 0.897 49 H 0.077 0.923 50 H 0.109 0.891 51 H 0.241 0.759 52 H 0.100 0.900 53 H 0.083 0.917 54 H 0.070 0.930 55 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.761 5.502 2.301 6.012 hybrid contribution -0.596 1.088 -1.215 1.737 sum 0.165 6.591 1.086 6.682 Atomic orbital electron populations 1.23476 0.76526 1.05741 1.02678 1.86367 1.23211 1.25848 1.86040 1.18960 0.91024 0.84750 0.88428 1.21413 1.02036 0.90677 1.18830 1.18904 0.90853 0.85032 0.88630 1.86110 1.21068 1.28546 1.86520 1.23475 0.76229 1.05947 1.02586 1.18594 0.90397 0.94959 1.12297 1.24874 1.12605 0.93004 0.87841 1.86569 1.80865 1.38628 1.30478 0.94424 0.71442 0.80952 0.87599 1.20930 1.00044 0.89098 0.91744 1.19128 0.90908 0.93695 1.19380 1.18037 0.82499 0.88331 0.75768 1.90818 1.72302 1.30188 1.50839 1.45864 1.04989 1.10146 1.75437 1.20858 0.91185 0.86296 0.96107 1.21295 0.98362 0.95154 0.95815 1.21592 0.96092 0.98409 0.98613 1.21069 0.95190 0.97099 0.96557 1.21672 1.01607 0.97100 0.94662 1.21280 0.92573 0.96566 1.00203 1.22128 1.01371 0.96752 0.96705 1.21092 0.90780 0.84436 0.94244 1.86536 1.31217 1.34988 1.86146 1.22166 0.99293 0.95002 1.00569 1.21366 0.94074 0.97038 1.01216 0.86935 0.90750 0.91230 0.81787 0.91742 0.90874 0.86057 0.89887 0.75787 1.19349 1.20761 0.82556 0.75491 0.92003 0.92435 0.91525 0.90533 0.88596 0.89576 0.90696 0.89688 0.92304 0.89138 0.75950 0.90014 0.91704 0.93048 0.91536 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.00 9.81 113.37 1.11 1.11 16 2 O -0.30 -2.99 8.56 -68.80 -0.59 -3.58 16 3 C 0.22 1.70 6.70 22.82 0.15 1.85 16 4 C -0.31 -0.97 8.01 22.43 0.18 -0.79 16 5 C 0.21 0.84 6.67 22.60 0.15 1.00 16 6 O -0.31 -0.76 9.80 -90.34 -0.89 -1.65 16 7 C 0.01 -0.06 9.80 113.37 1.11 1.05 16 8 C -0.16 -0.50 5.30 -19.80 -0.11 -0.61 16 9 C -0.08 0.02 2.36 71.24 0.17 0.18 16 10 O -0.56 -1.44 12.86 -148.98 -1.92 -3.35 16 11 Si 0.75 -3.54 30.19 68.60 2.07 -1.47 16 12 C 0.00 0.00 8.14 22.50 0.18 0.18 16 13 C -0.23 -1.65 5.89 -20.00 -0.12 -1.77 16 14 C 0.56 5.62 7.72 86.63 0.67 6.29 16 15 O -0.56 -10.31 14.81 16.84 0.25 -10.06 16 16 N -0.71 -2.10 4.18 -445.92 -1.86 -3.97 16 17 C 0.16 0.57 2.05 44.99 0.09 0.66 16 18 C -0.09 -0.32 2.88 -10.79 -0.03 -0.35 16 19 C -0.11 0.17 5.03 30.60 0.15 0.32 16 20 C -0.08 0.39 3.20 -10.79 -0.03 0.36 16 21 C -0.11 0.66 5.02 30.59 0.15 0.81 16 22 C -0.09 0.15 2.88 -10.79 -0.03 0.12 16 23 C -0.13 0.13 4.81 30.59 0.15 0.28 16 24 C 0.13 0.12 1.15 -10.81 -0.01 0.10 16 25 O -0.58 -1.76 12.98 -148.98 -1.93 -3.70 16 26 C -0.13 0.40 4.81 30.60 0.15 0.55 16 27 C -0.10 -0.49 4.84 30.58 0.15 -0.34 16 28 H 0.11 -0.22 8.14 -2.39 -0.02 -0.23 16 29 H 0.07 -0.29 7.66 -2.39 -0.02 -0.31 16 30 H 0.07 -0.21 7.66 -2.39 -0.02 -0.23 16 31 H 0.16 -0.37 4.50 -2.91 -0.01 -0.39 16 32 H 0.06 -0.38 7.65 -2.39 -0.02 -0.40 16 33 H 0.07 -0.55 7.65 -2.39 -0.02 -0.57 16 34 H 0.12 -1.00 8.14 -2.38 -0.02 -1.02 16 35 H 0.08 -0.16 7.82 -2.39 -0.02 -0.18 16 36 H 0.39 -2.14 8.74 -74.05 -0.65 -2.78 16 37 H -0.27 0.53 6.75 99.48 0.67 1.20 16 38 H -0.28 0.13 7.11 99.48 0.71 0.84 16 39 H 0.16 -0.49 3.20 -2.91 -0.01 -0.50 16 40 H 0.41 -1.02 4.88 -92.71 -0.45 -1.47 16 41 H 0.06 0.60 7.58 -2.39 -0.02 0.58 16 42 H 0.06 0.51 8.14 -2.39 -0.02 0.49 16 43 H 0.07 -0.07 8.14 -2.38 -0.02 -0.09 16 44 H 0.08 -0.24 7.60 -2.39 -0.02 -0.26 16 45 H 0.10 -0.72 8.14 -2.39 -0.02 -0.74 16 46 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 47 H 0.07 -0.60 6.51 -2.38 -0.02 -0.61 16 48 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 49 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 50 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 51 H 0.39 -1.95 9.04 -74.06 -0.67 -2.62 16 52 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 53 H 0.06 -0.07 8.14 -2.38 -0.02 -0.09 16 54 H 0.05 0.44 8.14 -2.39 -0.02 0.42 16 55 H 0.07 0.39 8.14 -2.38 -0.02 0.37 16 Total: 0.00 -25.61 410.62 -1.44 -27.05 By element: Atomic # 1 Polarization: -9.50 SS G_CDS: -0.81 Total: -10.31 kcal Atomic # 6 Polarization: 6.79 SS G_CDS: 4.24 Total: 11.03 kcal Atomic # 7 Polarization: -2.10 SS G_CDS: -1.86 Total: -3.97 kcal Atomic # 8 Polarization: -17.26 SS G_CDS: -5.07 Total: -22.34 kcal Atomic # 14 Polarization: -3.54 SS G_CDS: 2.07 Total: -1.47 kcal Total: -25.61 -1.44 -27.05 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_12297780.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.837 kcal (2) G-P(sol) polarization free energy of solvation -25.611 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -160.448 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.052 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.888 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.80 seconds