Wall clock time and date at job start Thu Mar 4 2021 18:00:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86296 * 109.47175 * 2 1 4 4 C 1.50706 * 109.46817 * 239.99906 * 2 1 3 5 5 C 1.38412 * 119.88673 * 120.00339 * 4 2 1 6 6 C 1.38254 * 120.33910 * 179.97438 * 5 4 2 7 7 C 1.38277 * 120.11603 * 0.04484 * 6 5 4 8 8 F 1.35094 * 120.11095 * 180.02562 * 7 6 5 9 9 C 1.39865 * 119.77870 * 359.97278 * 7 6 5 10 10 C 1.47689 * 120.16492 * 180.02562 * 9 7 6 11 11 O 1.21568 * 120.00098 * 0.02562 * 10 9 7 12 12 N 1.34782 * 119.99967 * 180.02562 * 10 9 7 13 13 C 1.46498 * 119.99761 * 180.02562 * 12 10 9 14 14 C 1.53003 * 109.46956 * 274.99805 * 13 12 10 15 15 C 1.52992 * 109.47391 * 300.00348 * 14 13 12 16 16 C 1.53003 * 109.47219 * 299.99997 * 15 14 13 17 17 C 1.52996 * 109.47105 * 60.00177 * 16 15 14 18 18 C 1.53003 * 109.46875 * 155.00285 * 13 12 10 19 19 C 1.53004 * 109.47014 * 179.97438 * 18 13 12 20 20 C 1.53003 * 109.46984 * 299.99622 * 19 18 13 21 21 O 1.42902 * 109.46859 * 180.02562 * 20 19 18 22 22 C 1.52992 * 109.47391 * 300.00161 * 20 19 18 23 23 C 1.53003 * 109.46937 * 60.00331 * 20 19 18 24 24 C 1.37895 * 119.89415 * 299.72828 * 4 2 1 25 25 H 0.96695 * 113.99773 * 300.00357 * 1 2 3 26 26 H 1.08998 * 109.46695 * 120.00489 * 2 1 3 27 27 H 1.48501 * 109.99699 * 178.68059 * 3 2 1 28 28 H 1.48499 * 110.00356 * 299.99763 * 3 2 1 29 29 H 1.08007 * 119.83359 * 359.97196 * 5 4 2 30 30 H 1.07997 * 119.94115 * 180.02562 * 6 5 4 31 31 H 0.96996 * 120.00132 * 0.02562 * 12 10 9 32 32 H 1.08996 * 109.47531 * 34.99933 * 13 12 10 33 33 H 1.09006 * 109.47039 * 60.00623 * 14 13 12 34 34 H 1.09001 * 109.47134 * 179.97438 * 15 14 13 35 35 H 1.08996 * 109.47494 * 60.00012 * 15 14 13 36 36 H 1.09001 * 109.47008 * 180.02562 * 16 15 14 37 37 H 1.09000 * 109.47185 * 180.02562 * 17 16 15 38 38 H 1.08991 * 109.47563 * 59.99777 * 17 16 15 39 39 H 1.09001 * 109.47103 * 299.99744 * 18 13 12 40 40 H 1.08996 * 109.47364 * 59.99665 * 19 18 13 41 41 H 1.09002 * 109.46956 * 180.02562 * 19 18 13 42 42 H 0.96695 * 113.99976 * 60.00731 * 21 20 19 43 43 H 1.09002 * 109.47626 * 299.99817 * 22 20 19 44 44 H 1.09001 * 109.47134 * 179.97438 * 22 20 19 45 45 H 1.09001 * 109.47008 * 59.99682 * 23 20 19 46 46 H 1.09001 * 109.47103 * 179.97438 * 23 20 19 47 47 H 1.08002 * 120.05625 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.7270 -0.0356 -2.1401 6 6 3.1933 -0.6784 -3.2718 7 6 2.8660 -2.0019 -3.5025 8 9 3.3222 -2.6301 -4.6081 9 6 2.0621 -2.6885 -2.5868 10 6 1.7077 -4.1024 -2.8244 11 8 2.1155 -4.6726 -3.8177 12 7 0.9323 -4.7607 -1.9400 13 6 0.5814 -6.1633 -2.1755 14 6 -0.6474 -6.2359 -3.0843 15 6 -1.8219 -5.5223 -2.4119 16 6 -2.1343 -6.2009 -1.0767 17 6 -0.9056 -6.1282 -0.1679 18 6 0.2690 -6.8419 -0.8403 19 6 -0.0982 -8.3068 -1.0862 20 6 -1.3272 -8.3788 -1.9947 21 8 -1.6705 -9.7469 -2.2240 22 6 -2.5012 -7.6648 -1.3221 23 6 -1.0148 -7.7002 -3.3300 24 6 1.6015 -2.0323 -1.4437 25 1 -0.3933 0.4417 0.7650 26 1 1.7923 -0.5139 0.8899 27 1 3.5346 1.7701 0.0321 28 1 1.5616 2.4679 -1.2085 29 1 2.9848 0.9985 -1.9649 30 1 3.8140 -0.1458 -3.9770 31 1 0.6067 -4.3057 -1.1477 32 1 1.4180 -6.6718 -2.6545 33 1 -0.4249 -5.7525 -4.0356 34 1 -2.6971 -5.5736 -3.0596 35 1 -1.5608 -4.4786 -2.2367 36 1 -2.9713 -5.6927 -0.5979 37 1 -1.1280 -6.6120 0.7832 38 1 -0.6444 -5.0846 0.0072 39 1 1.1444 -6.7902 -0.1928 40 1 0.7382 -8.8155 -1.5655 41 1 -0.3212 -8.7901 -0.1350 42 1 -1.8814 -10.2397 -1.4192 43 1 -2.7239 -8.1482 -0.3709 44 1 -3.3766 -7.7157 -1.9696 45 1 -0.1783 -8.2090 -3.8092 46 1 -1.8902 -7.7520 -3.9774 47 1 0.9845 -2.5578 -0.7298 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_12335834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:00:34 Heat of formation + Delta-G solvation = -139.200533 kcal Electronic energy + Delta-G solvation = -32459.746476 eV Core-core repulsion = 28101.391790 eV Total energy + Delta-G solvation = -4358.354686 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.157 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -50.15646 -42.93122 -41.20199 -39.87924 -37.67012 -37.42202 -35.55343 -33.81023 -33.55929 -32.72436 -32.47017 -30.90240 -27.04593 -27.02420 -26.61840 -25.35269 -23.38149 -22.84654 -22.54038 -22.13730 -21.33833 -19.55100 -18.75400 -18.57522 -18.19500 -18.10547 -17.69659 -17.05905 -16.79144 -16.48995 -16.15820 -16.01247 -15.90019 -15.48695 -15.43481 -15.25534 -15.13728 -14.77329 -14.58966 -14.49079 -14.37631 -14.10890 -13.96640 -13.64237 -13.54902 -13.45071 -13.34280 -13.07502 -12.67744 -12.58049 -12.48146 -12.10038 -11.99714 -11.99017 -11.81012 -11.55551 -11.31168 -11.18686 -10.81489 -10.54698 -10.46976 -10.38446 -10.12609 -9.88043 -4.90827 -0.67074 -0.18374 1.30758 1.47496 1.68894 1.82986 1.99514 2.32946 2.87975 3.11443 3.22425 3.25638 3.34139 3.40630 3.45078 3.64668 3.76375 3.85422 3.87493 3.93728 4.04640 4.06201 4.08547 4.13383 4.18698 4.23504 4.24422 4.34811 4.47676 4.51298 4.57090 4.64842 4.66221 4.67287 4.74455 4.75112 4.81329 4.95638 4.96644 4.97888 4.99331 5.02599 5.09868 5.12928 5.24071 5.29223 5.33826 5.41424 5.45097 5.46562 6.28337 6.87422 6.94860 6.97012 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.071 4.071 3 Si 0.763 3.237 4 C -0.098 4.098 5 C -0.075 4.075 6 C -0.154 4.154 7 C 0.133 3.867 8 F -0.134 7.134 9 C -0.183 4.183 10 C 0.556 3.444 11 O -0.569 6.569 12 N -0.697 5.697 13 C 0.158 3.842 14 C -0.089 4.089 15 C -0.108 4.108 16 C -0.080 4.080 17 C -0.109 4.109 18 C -0.084 4.084 19 C -0.132 4.132 20 C 0.135 3.865 21 O -0.581 6.581 22 C -0.133 4.133 23 C -0.100 4.100 24 C -0.019 4.019 25 H 0.407 0.593 26 H 0.112 0.888 27 H -0.285 1.285 28 H -0.297 1.297 29 H 0.141 0.859 30 H 0.162 0.838 31 H 0.414 0.586 32 H 0.064 0.936 33 H 0.051 0.949 34 H 0.060 0.940 35 H 0.069 0.931 36 H 0.092 0.908 37 H 0.091 0.909 38 H 0.078 0.922 39 H 0.094 0.906 40 H 0.059 0.941 41 H 0.095 0.905 42 H 0.392 0.608 43 H 0.086 0.914 44 H 0.060 0.940 45 H 0.052 0.948 46 H 0.063 0.937 47 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.585 4.690 12.934 14.218 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.181 4.181 3 Si 0.669 3.331 4 C -0.098 4.098 5 C -0.092 4.092 6 C -0.173 4.173 7 C 0.113 3.887 8 F -0.112 7.112 9 C -0.187 4.187 10 C 0.344 3.656 11 O -0.449 6.449 12 N -0.350 5.350 13 C 0.053 3.947 14 C -0.108 4.108 15 C -0.146 4.146 16 C -0.099 4.099 17 C -0.146 4.146 18 C -0.103 4.103 19 C -0.170 4.170 20 C 0.095 3.905 21 O -0.389 6.389 22 C -0.171 4.171 23 C -0.138 4.138 24 C -0.037 4.037 25 H 0.259 0.741 26 H 0.129 0.871 27 H -0.212 1.212 28 H -0.225 1.225 29 H 0.158 0.842 30 H 0.180 0.820 31 H 0.254 0.746 32 H 0.082 0.918 33 H 0.069 0.931 34 H 0.079 0.921 35 H 0.088 0.912 36 H 0.110 0.890 37 H 0.109 0.891 38 H 0.097 0.903 39 H 0.112 0.888 40 H 0.078 0.922 41 H 0.113 0.887 42 H 0.242 0.758 43 H 0.104 0.896 44 H 0.079 0.921 45 H 0.071 0.929 46 H 0.082 0.918 47 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -2.625 4.692 10.642 11.923 hybrid contribution 0.295 -0.661 -0.603 0.942 sum -2.330 4.031 10.039 11.066 Atomic orbital electron populations 1.86428 1.16489 1.82391 1.51750 1.24671 0.86438 1.10411 0.96571 0.94172 0.77685 0.75849 0.85349 1.19750 0.98606 0.94289 0.97203 1.21176 0.95810 0.99639 0.92618 1.21270 1.03404 0.92340 1.00241 1.18090 0.95490 0.91515 0.83654 1.91561 1.86551 1.82584 1.50492 1.20142 1.04954 0.94872 0.98695 1.18227 0.78422 0.86031 0.82959 1.90846 1.55185 1.69303 1.29537 1.45796 1.50807 1.12826 1.25521 1.20945 0.96119 0.80658 0.96963 1.21295 0.95898 0.95230 0.98413 1.21561 0.96759 0.99259 0.97005 1.21036 0.98838 0.94917 0.95068 1.21651 0.93005 1.01212 0.98779 1.21284 1.00188 0.94439 0.94349 1.22145 0.97866 0.96098 1.00915 1.21090 0.93888 0.81371 0.94187 1.86538 1.91115 1.22921 1.38346 1.22158 0.97321 0.96221 1.01411 1.21367 1.01311 0.94321 0.96809 1.21244 0.94873 0.93647 0.93960 0.74056 0.87083 1.21231 1.22465 0.84180 0.82018 0.74622 0.91807 0.93085 0.92089 0.91236 0.88966 0.89086 0.90300 0.88768 0.92201 0.88652 0.75813 0.89579 0.92079 0.92931 0.91815 0.81329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 4.44 12.74 -148.98 -1.90 2.54 16 2 C -0.07 0.55 2.81 71.24 0.20 0.74 16 3 Si 0.76 -5.49 29.78 68.60 2.04 -3.45 16 4 C -0.10 0.11 5.42 -19.90 -0.11 0.00 16 5 C -0.07 -0.08 8.66 22.31 0.19 0.11 16 6 C -0.15 -0.58 10.01 22.28 0.22 -0.36 16 7 C 0.13 1.21 7.29 22.67 0.17 1.38 16 8 F -0.13 -2.06 15.55 44.97 0.70 -1.36 16 9 C -0.18 -1.12 5.88 -20.05 -0.12 -1.23 16 10 C 0.56 5.09 7.73 86.74 0.67 5.76 16 11 O -0.57 -10.75 15.00 -3.93 -0.06 -10.81 16 12 N -0.70 -0.70 4.18 -445.55 -1.86 -2.57 16 13 C 0.16 0.37 2.05 44.99 0.09 0.46 16 14 C -0.09 -0.36 2.87 -10.81 -0.03 -0.39 16 15 C -0.11 0.07 5.03 30.59 0.15 0.22 16 16 C -0.08 0.41 3.19 -10.83 -0.03 0.38 16 17 C -0.11 0.88 5.02 30.59 0.15 1.03 16 18 C -0.08 0.34 2.88 -10.79 -0.03 0.31 16 19 C -0.13 0.35 4.81 30.60 0.15 0.49 16 20 C 0.13 0.05 1.15 -10.79 -0.01 0.03 16 21 O -0.58 -1.51 12.98 -148.98 -1.93 -3.44 16 22 C -0.13 0.44 4.81 30.56 0.15 0.59 16 23 C -0.10 -0.52 4.84 30.58 0.15 -0.37 16 24 C -0.02 0.02 9.10 22.52 0.20 0.22 16 25 H 0.41 -7.28 8.74 -74.06 -0.65 -7.93 16 26 H 0.11 -1.46 7.96 -2.39 -0.02 -1.48 16 27 H -0.29 0.49 7.11 99.48 0.71 1.20 16 28 H -0.30 -0.29 7.11 99.48 0.71 0.42 16 29 H 0.14 -0.15 4.86 -2.91 -0.01 -0.17 16 30 H 0.16 -0.01 8.06 -2.91 -0.02 -0.03 16 31 H 0.41 -2.38 4.90 -92.71 -0.45 -2.84 16 32 H 0.06 0.54 7.58 -2.39 -0.02 0.52 16 33 H 0.05 0.52 8.14 -2.38 -0.02 0.50 16 34 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 35 H 0.07 -0.09 7.60 -2.39 -0.02 -0.11 16 36 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 37 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 38 H 0.08 -0.85 6.50 -2.39 -0.02 -0.87 16 39 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 40 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 41 H 0.10 -0.64 8.14 -2.39 -0.02 -0.66 16 42 H 0.39 -2.25 9.04 -74.06 -0.67 -2.92 16 43 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 44 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 45 H 0.05 0.45 8.14 -2.39 -0.02 0.43 16 46 H 0.06 0.43 8.14 -2.39 -0.02 0.41 16 47 H 0.17 -1.31 6.41 -2.91 -0.02 -1.33 16 Total: 0.00 -25.83 359.23 -1.55 -27.37 By element: Atomic # 1 Polarization: -16.97 SS G_CDS: -0.70 Total: -17.67 kcal Atomic # 6 Polarization: 7.23 SS G_CDS: 2.16 Total: 9.39 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: -1.86 Total: -2.57 kcal Atomic # 8 Polarization: -7.83 SS G_CDS: -3.89 Total: -11.72 kcal Atomic # 9 Polarization: -2.06 SS G_CDS: 0.70 Total: -1.36 kcal Atomic # 14 Polarization: -5.49 SS G_CDS: 2.04 Total: -3.45 kcal Total: -25.83 -1.55 -27.37 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_12335834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.827 kcal (2) G-P(sol) polarization free energy of solvation -25.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.654 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.547 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.374 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds