Wall clock time and date at job start Thu Mar 4 2021 18:00:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86293 * 109.47468 * 2 1 4 4 C 1.50701 * 109.46890 * 120.00016 * 2 1 3 5 5 C 1.38238 * 120.00039 * 64.99798 * 4 2 1 6 6 C 1.38234 * 120.00016 * 180.02562 * 5 4 2 7 7 C 1.38232 * 119.99853 * 359.97438 * 6 5 4 8 8 C 1.50705 * 119.99970 * 179.97438 * 7 6 5 9 9 C 1.50703 * 109.46994 * 90.00365 * 8 7 6 10 10 O 1.21284 * 119.99942 * 359.97438 * 9 8 7 11 11 N 1.34773 * 119.99837 * 180.02562 * 9 8 7 12 12 C 1.46499 * 120.00031 * 179.97438 * 11 9 8 13 13 C 1.52997 * 109.47695 * 204.99801 * 12 11 9 14 14 C 1.52997 * 109.47457 * 179.97438 * 13 12 11 15 15 C 1.53002 * 109.46817 * 60.00169 * 14 13 12 16 16 C 1.52996 * 109.47346 * 299.99737 * 15 14 13 17 17 C 1.53002 * 109.46891 * 59.99997 * 16 15 14 18 18 C 1.52997 * 109.46978 * 60.00410 * 17 16 15 19 19 C 1.53006 * 109.47164 * 299.99874 * 18 17 16 20 20 O 1.42895 * 109.47000 * 180.02562 * 19 18 17 21 21 C 1.52997 * 109.47127 * 59.99836 * 19 18 17 22 22 C 1.52999 * 109.46623 * 299.99900 * 19 18 17 23 23 C 1.38234 * 120.00529 * 0.26041 * 7 6 5 24 24 C 1.38235 * 119.99384 * 359.48804 * 23 7 6 25 25 H 0.96704 * 113.99781 * 300.00153 * 1 2 3 26 26 H 1.09001 * 109.46619 * 239.99768 * 2 1 3 27 27 H 1.48498 * 110.00397 * 178.68216 * 3 2 1 28 28 H 1.48500 * 109.99856 * 300.00088 * 3 2 1 29 29 H 1.08002 * 119.99878 * 359.97438 * 5 4 2 30 30 H 1.07999 * 120.00124 * 179.97438 * 6 5 4 31 31 H 1.09002 * 109.47010 * 330.00559 * 8 7 6 32 32 H 1.08995 * 109.47332 * 210.00586 * 8 7 6 33 33 H 0.96998 * 120.00452 * 359.97438 * 11 9 8 34 34 H 1.09004 * 109.47041 * 324.99924 * 12 11 9 35 35 H 1.09001 * 109.46989 * 59.99548 * 13 12 11 36 36 H 1.08993 * 109.47194 * 299.99651 * 14 13 12 37 37 H 1.09002 * 109.46695 * 179.97438 * 14 13 12 38 38 H 1.09004 * 109.46733 * 179.97438 * 15 14 13 39 39 H 1.08992 * 109.47554 * 180.02562 * 16 15 14 40 40 H 1.09004 * 109.47108 * 300.00289 * 16 15 14 41 41 H 1.09002 * 109.47097 * 180.02562 * 17 16 15 42 42 H 1.09000 * 109.47140 * 179.97438 * 18 17 16 43 43 H 1.09001 * 109.47375 * 59.99908 * 18 17 16 44 44 H 0.96696 * 114.00485 * 299.99339 * 20 19 18 45 45 H 1.09002 * 109.47153 * 180.02562 * 21 19 18 46 46 H 1.09001 * 109.46832 * 60.00321 * 21 19 18 47 47 H 1.09000 * 109.47486 * 299.99829 * 22 19 18 48 48 H 1.09002 * 109.46716 * 179.97438 * 22 19 18 49 49 H 1.08000 * 120.00375 * 179.72214 * 23 7 6 50 50 H 1.08008 * 120.00167 * 180.23879 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6846 -2.0602 1.3984 6 6 2.1449 -2.7117 2.5273 7 6 2.8523 -2.0136 3.4881 8 6 3.3536 -2.7238 4.7192 9 6 4.7349 -3.2669 4.4583 10 8 5.2603 -3.0948 3.3788 11 7 5.3859 -3.9449 5.4242 12 6 6.7285 -4.4734 5.1704 13 6 6.9901 -5.6657 6.0928 14 6 8.3920 -6.2180 5.8273 15 6 9.4297 -5.1266 6.0977 16 6 9.1682 -3.9344 5.1752 17 6 7.7662 -3.3821 5.4407 18 6 7.6636 -2.9308 6.8990 19 6 7.9252 -4.1231 7.8215 20 8 7.8288 -3.7016 9.1835 21 6 9.3271 -4.6754 7.5560 22 6 6.8875 -5.2143 7.5511 23 6 3.0948 -0.6628 3.3226 24 6 2.6390 -0.0124 2.1911 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5139 -0.8900 27 1 3.5347 1.7702 0.0321 28 1 1.5616 2.4678 -1.2085 29 1 1.1316 -2.6055 0.6479 30 1 1.9518 -3.7662 2.6587 31 1 2.6804 -3.5453 4.9641 32 1 3.3902 -2.0231 5.5533 33 1 4.9656 -4.0829 6.2874 34 1 6.8020 -4.7949 4.1314 35 1 6.2511 -6.4433 5.8999 36 1 8.4651 -6.5396 4.7884 37 1 8.5785 -7.0671 6.4848 38 1 10.4285 -5.5203 5.9089 39 1 9.9077 -3.1571 5.3675 40 1 9.2413 -4.2559 4.1363 41 1 7.5797 -2.5330 4.7832 42 1 6.6650 -2.5369 7.0880 43 1 8.4029 -2.1533 7.0916 44 1 8.4586 -3.0093 9.4266 45 1 9.5133 -5.5250 8.2129 46 1 10.0664 -3.8979 7.7486 47 1 5.8887 -4.8208 7.7403 48 1 7.0741 -6.0639 8.2080 49 1 3.6436 -0.1165 4.0754 50 1 2.8318 1.0422 2.0599 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_12335836.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:00:38 Heat of formation + Delta-G solvation = -105.484258 kcal Electronic energy + Delta-G solvation = -31177.361412 eV Core-core repulsion = 27134.385130 eV Total energy + Delta-G solvation = -4042.976282 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.182 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.85191 -41.00001 -39.96256 -37.70216 -37.42663 -35.70166 -34.08048 -33.75916 -32.43098 -31.94633 -31.57479 -29.65214 -26.99497 -26.80230 -25.47954 -23.82203 -23.02238 -22.71350 -22.33250 -21.86013 -21.01257 -18.96593 -18.43256 -18.18347 -17.80084 -17.22880 -16.92090 -16.50525 -16.23192 -16.06652 -15.89586 -15.69151 -15.48523 -15.23204 -15.16874 -14.81744 -14.73105 -14.62732 -14.47992 -14.21847 -14.11238 -13.72999 -13.54606 -13.35497 -13.24977 -13.12194 -13.01141 -12.80690 -12.27610 -12.15780 -12.05221 -12.01658 -11.93624 -11.90267 -11.72798 -11.59244 -11.25383 -10.96391 -10.78322 -10.45604 -10.44578 -9.99855 -9.88434 -9.62505 -5.05090 0.23227 0.44361 1.28254 1.60988 1.64244 1.92326 2.15134 2.77896 3.11864 3.41101 3.46227 3.49753 3.62904 3.77346 3.80290 3.87490 3.90085 3.96040 4.01283 4.04656 4.10329 4.14202 4.17579 4.22447 4.27639 4.30178 4.34507 4.45708 4.47860 4.56151 4.59916 4.66036 4.68391 4.69524 4.71282 4.93693 4.97536 4.98264 5.01131 5.01793 5.04111 5.07809 5.09444 5.14578 5.28044 5.35517 5.36934 5.39748 5.46001 5.52472 5.53113 5.58507 6.00804 6.54054 6.75205 6.84679 7.26458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.075 4.075 3 Si 0.781 3.219 4 C -0.129 4.129 5 C -0.108 4.108 6 C -0.116 4.116 7 C -0.069 4.069 8 C -0.099 4.099 9 C 0.514 3.486 10 O -0.578 6.578 11 N -0.714 5.714 12 C 0.158 3.842 13 C -0.083 4.083 14 C -0.111 4.111 15 C -0.083 4.083 16 C -0.110 4.110 17 C -0.088 4.088 18 C -0.129 4.129 19 C 0.137 3.863 20 O -0.575 6.575 21 C -0.135 4.135 22 C -0.099 4.099 23 C -0.110 4.110 24 C -0.121 4.121 25 H 0.395 0.605 26 H 0.100 0.900 27 H -0.293 1.293 28 H -0.297 1.297 29 H 0.122 0.878 30 H 0.131 0.869 31 H 0.128 0.872 32 H 0.131 0.869 33 H 0.412 0.588 34 H 0.067 0.933 35 H 0.092 0.908 36 H 0.068 0.932 37 H 0.079 0.921 38 H 0.082 0.918 39 H 0.069 0.931 40 H 0.060 0.940 41 H 0.054 0.946 42 H 0.069 0.931 43 H 0.068 0.932 44 H 0.389 0.611 45 H 0.070 0.930 46 H 0.070 0.930 47 H 0.074 0.926 48 H 0.074 0.926 49 H 0.141 0.859 50 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.030 -0.166 7.345 7.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.185 4.185 3 Si 0.688 3.312 4 C -0.129 4.129 5 C -0.126 4.126 6 C -0.134 4.134 7 C -0.070 4.070 8 C -0.139 4.139 9 C 0.302 3.698 10 O -0.457 6.457 11 N -0.366 5.366 12 C 0.053 3.947 13 C -0.102 4.102 14 C -0.148 4.148 15 C -0.102 4.102 16 C -0.148 4.148 17 C -0.108 4.108 18 C -0.167 4.167 19 C 0.097 3.903 20 O -0.383 6.383 21 C -0.173 4.173 22 C -0.137 4.137 23 C -0.128 4.128 24 C -0.139 4.139 25 H 0.245 0.755 26 H 0.117 0.883 27 H -0.220 1.220 28 H -0.225 1.225 29 H 0.140 0.860 30 H 0.149 0.851 31 H 0.146 0.854 32 H 0.149 0.851 33 H 0.250 0.750 34 H 0.085 0.915 35 H 0.110 0.890 36 H 0.087 0.913 37 H 0.098 0.902 38 H 0.100 0.900 39 H 0.088 0.912 40 H 0.079 0.921 41 H 0.073 0.927 42 H 0.088 0.912 43 H 0.087 0.913 44 H 0.238 0.762 45 H 0.088 0.912 46 H 0.089 0.911 47 H 0.093 0.907 48 H 0.092 0.908 49 H 0.159 0.841 50 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.479 -0.224 5.638 5.662 hybrid contribution 0.561 -0.253 -0.321 0.694 sum 1.040 -0.477 5.317 5.439 Atomic orbital electron populations 1.86462 1.17118 1.82230 1.50476 1.25180 0.85360 1.10931 0.97045 0.93758 0.77523 0.75331 0.84632 1.20399 1.00291 0.95129 0.97084 1.21091 0.99411 0.94243 0.97902 1.21225 0.98081 1.00222 0.93863 1.19556 0.97381 0.93993 0.96047 1.20772 0.92802 1.02788 0.97512 1.21009 0.87978 0.77337 0.83525 1.90741 1.69793 1.58913 1.26285 1.46054 1.17389 1.56277 1.16930 1.20840 0.81402 0.93190 0.99253 1.21282 0.98912 0.96346 0.93615 1.21585 0.92880 0.97959 1.02419 1.21051 0.99742 0.95228 0.94163 1.21558 0.95644 0.98022 0.99557 1.21295 0.95337 0.97716 0.96441 1.22114 1.02615 0.97880 0.94090 1.21062 0.94955 0.93361 0.80960 1.86512 1.63476 1.60766 1.27569 1.22181 0.96745 1.01687 0.96677 1.21442 0.98681 0.97927 0.95637 1.21228 0.99116 0.94327 0.98149 1.21152 0.98534 1.00010 0.94164 0.75467 0.88264 1.22044 1.22503 0.86019 0.85113 0.85365 0.85082 0.74961 0.91457 0.89005 0.91319 0.90241 0.89996 0.91241 0.92077 0.92715 0.91238 0.91342 0.76154 0.91168 0.91133 0.90717 0.90752 0.84096 0.84007 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.52 12.83 -148.98 -1.91 -3.43 16 2 C -0.08 -0.22 2.80 71.24 0.20 -0.02 16 3 Si 0.78 0.46 29.80 68.60 2.04 2.50 16 4 C -0.13 -0.51 5.35 -19.86 -0.11 -0.61 16 5 C -0.11 -0.56 9.69 22.27 0.22 -0.35 16 6 C -0.12 -0.41 9.70 22.27 0.22 -0.20 16 7 C -0.07 -0.12 4.37 -19.87 -0.09 -0.21 16 8 C -0.10 0.42 5.83 29.10 0.17 0.59 16 9 C 0.51 0.97 7.79 87.66 0.68 1.66 16 10 O -0.58 -7.01 15.70 -3.04 -0.05 -7.06 16 11 N -0.71 1.98 4.24 -442.53 -1.87 0.11 16 12 C 0.16 -0.08 2.05 44.99 0.09 0.01 16 13 C -0.08 0.32 2.88 -10.79 -0.03 0.29 16 14 C -0.11 0.41 5.19 30.59 0.16 0.57 16 15 C -0.08 0.27 3.19 -10.79 -0.03 0.23 16 16 C -0.11 0.12 5.19 30.59 0.16 0.28 16 17 C -0.09 0.00 2.88 -10.79 -0.03 -0.04 16 18 C -0.13 0.32 4.66 30.60 0.14 0.46 16 19 C 0.14 -0.40 1.15 -10.79 -0.01 -0.41 16 20 O -0.58 0.69 12.98 -148.98 -1.93 -1.24 16 21 C -0.14 0.47 4.82 30.59 0.15 0.61 16 22 C -0.10 0.37 4.67 30.60 0.14 0.51 16 23 C -0.11 -0.17 9.70 22.27 0.22 0.05 16 24 C -0.12 -0.23 8.67 22.27 0.19 -0.04 16 25 H 0.40 -2.29 8.70 -74.05 -0.64 -2.94 16 26 H 0.10 0.50 7.96 -2.39 -0.02 0.48 16 27 H -0.29 -1.86 7.11 99.48 0.71 -1.16 16 28 H -0.30 -2.22 7.11 99.48 0.71 -1.51 16 29 H 0.12 0.57 8.06 -2.91 -0.02 0.55 16 30 H 0.13 0.08 8.06 -2.91 -0.02 0.05 16 31 H 0.13 -1.14 8.09 -2.39 -0.02 -1.16 16 32 H 0.13 -1.24 8.08 -2.39 -0.02 -1.26 16 33 H 0.41 -3.23 6.87 -92.71 -0.64 -3.86 16 34 H 0.07 0.32 7.58 -2.38 -0.02 0.30 16 35 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 36 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 37 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 38 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 39 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 40 H 0.06 0.03 8.14 -2.38 -0.02 0.01 16 41 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 42 H 0.07 -0.15 7.61 -2.39 -0.02 -0.17 16 43 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 44 H 0.39 -2.84 9.05 -74.06 -0.67 -3.51 16 45 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 46 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 47 H 0.07 -0.39 6.51 -2.39 -0.02 -0.40 16 48 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 49 H 0.14 -0.38 8.06 -2.91 -0.02 -0.40 16 50 H 0.14 -0.35 4.91 -2.91 -0.01 -0.37 16 Total: 0.00 -21.11 379.42 -2.23 -23.34 By element: Atomic # 1 Polarization: -16.66 SS G_CDS: -0.94 Total: -17.61 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: 2.43 Total: 3.39 kcal Atomic # 7 Polarization: 1.98 SS G_CDS: -1.87 Total: 0.11 kcal Atomic # 8 Polarization: -7.84 SS G_CDS: -3.89 Total: -11.73 kcal Atomic # 14 Polarization: 0.46 SS G_CDS: 2.04 Total: 2.50 kcal Total: -21.11 -2.23 -23.34 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_12335836.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.142 kcal (2) G-P(sol) polarization free energy of solvation -21.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.342 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.484 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds