Wall clock time and date at job start Thu Mar 4 2021 18:00:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86301 * 109.47131 * 2 1 4 4 C 1.50699 * 109.47232 * 120.00405 * 2 1 3 5 5 C 1.34455 * 126.48263 * 255.02616 * 4 2 1 6 6 N 1.36559 * 109.98637 * 179.97438 * 5 4 2 7 7 C 1.37827 * 109.86068 * 0.02562 * 6 5 4 8 8 C 1.38651 * 133.38064 * 179.97438 * 7 6 5 9 9 C 1.39313 * 119.66660 * 179.97438 * 8 7 6 10 10 C 1.47584 * 119.83299 * 179.97438 * 9 8 7 11 11 O 1.21584 * 119.99615 * 0.02592 * 10 9 8 12 12 N 1.34776 * 119.99896 * 180.02562 * 10 9 8 13 13 C 1.46500 * 119.99677 * 180.02562 * 12 10 9 14 14 C 1.53005 * 109.47034 * 274.99854 * 13 12 10 15 15 C 1.52990 * 109.47028 * 300.00199 * 14 13 12 16 16 C 1.53001 * 109.47148 * 299.99807 * 15 14 13 17 17 C 1.53005 * 109.46999 * 60.00175 * 16 15 14 18 18 C 1.52991 * 109.47435 * 154.99813 * 13 12 10 19 19 C 1.52998 * 109.47578 * 180.02562 * 18 13 12 20 20 C 1.53002 * 109.46603 * 299.99855 * 19 18 13 21 21 O 1.42904 * 109.46731 * 180.02562 * 20 19 18 22 22 C 1.52995 * 109.47307 * 299.99765 * 20 19 18 23 23 C 1.52992 * 109.47146 * 60.00188 * 20 19 18 24 24 C 1.40205 * 120.33707 * 0.02562 * 9 8 7 25 25 C 1.36230 * 120.37856 * 0.27749 * 24 9 8 26 26 C 1.39885 * 119.95950 * 359.45159 * 25 24 9 27 27 H 0.96699 * 114.00009 * 299.99647 * 1 2 3 28 28 H 1.09006 * 109.47367 * 240.00724 * 2 1 3 29 29 H 1.48498 * 110.00250 * 178.67807 * 3 2 1 30 30 H 1.48491 * 110.00207 * 300.00499 * 3 2 1 31 31 H 1.08002 * 125.00147 * 359.95354 * 5 4 2 32 32 H 0.97001 * 125.06842 * 179.97438 * 6 5 4 33 33 H 1.08002 * 120.16374 * 0.02562 * 8 7 6 34 34 H 0.96993 * 119.99989 * 359.97438 * 12 10 9 35 35 H 1.09002 * 109.47491 * 34.99577 * 13 12 10 36 36 H 1.08998 * 109.47048 * 60.00322 * 14 13 12 37 37 H 1.09003 * 109.47377 * 180.02562 * 15 14 13 38 38 H 1.09000 * 109.47348 * 59.99871 * 15 14 13 39 39 H 1.09002 * 109.47305 * 179.97438 * 16 15 14 40 40 H 1.08997 * 109.46893 * 180.02562 * 17 16 15 41 41 H 1.09000 * 109.47161 * 60.00141 * 17 16 15 42 42 H 1.09002 * 109.47072 * 299.99915 * 18 13 12 43 43 H 1.08995 * 109.47116 * 59.99839 * 19 18 13 44 44 H 1.08998 * 109.47084 * 180.02562 * 19 18 13 45 45 H 0.96693 * 114.00460 * 60.00252 * 21 20 19 46 46 H 1.08998 * 109.47601 * 300.00306 * 22 20 19 47 47 H 1.09002 * 109.47080 * 180.02562 * 22 20 19 48 48 H 1.09007 * 109.47639 * 59.99791 * 23 20 19 49 49 H 1.09002 * 109.47183 * 179.97438 * 23 20 19 50 50 H 1.08002 * 119.80800 * 179.97438 * 24 9 8 51 51 H 1.07996 * 120.01876 * 179.70590 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4611 -0.1364 2.3247 6 7 2.8027 -1.0948 3.2356 7 6 2.4946 -2.3433 2.7395 8 6 2.6315 -3.6281 3.2423 9 6 2.2139 -4.7156 2.4783 10 6 2.3584 -6.0849 3.0096 11 8 2.8404 -6.2615 4.1117 12 7 1.9560 -7.1395 2.2731 13 6 2.0989 -8.4986 2.8008 14 6 3.5080 -9.0155 2.5036 15 6 3.7379 -9.0288 0.9911 16 6 2.7081 -9.9448 0.3268 17 6 1.2989 -9.4279 0.6239 18 6 1.0691 -9.4146 2.1366 19 6 1.2180 -10.8339 2.6881 20 6 2.6270 -11.3511 2.3914 21 8 2.7659 -12.6770 2.9060 22 6 2.8573 -11.3650 0.8789 23 6 3.6568 -10.4352 3.0557 24 6 1.6580 -4.5160 1.2067 25 6 1.5256 -3.2574 0.7025 26 6 1.9349 -2.1549 1.4599 27 1 -0.3933 0.4416 0.7651 28 1 1.7923 -0.5137 -0.8901 29 1 3.5345 1.7704 0.0322 30 1 1.5614 2.4679 -1.2083 31 1 2.5969 0.9261 2.4627 32 1 3.2030 -0.9226 4.1022 33 1 3.0589 -3.7850 4.2216 34 1 1.5711 -6.9985 1.3940 35 1 1.9352 -8.4892 3.8784 36 1 4.2417 -8.3630 2.9769 37 1 4.7416 -9.3975 0.7793 38 1 3.6315 -8.0176 0.5985 39 1 2.8715 -9.9539 -0.7509 40 1 0.5653 -10.0807 0.1510 41 1 1.1926 -8.4167 0.2313 42 1 0.0653 -9.0464 2.3483 43 1 1.0539 -10.8240 3.7656 44 1 0.4846 -11.4865 2.2145 45 1 2.1431 -13.3129 2.5281 46 1 2.1236 -12.0175 0.4056 47 1 3.8609 -11.7339 0.6676 48 1 3.4929 -10.4253 4.1333 49 1 4.6607 -10.8039 2.8447 50 1 1.3375 -5.3653 0.6215 51 1 1.1010 -3.1106 -0.2795 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_12335838.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:00:42 Heat of formation + Delta-G solvation = -66.950656 kcal Electronic energy + Delta-G solvation = -34306.143524 eV Core-core repulsion = 29942.959992 eV Total energy + Delta-G solvation = -4363.183532 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.177 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -42.90153 -42.40735 -40.58601 -37.95554 -37.60885 -37.41125 -35.43485 -33.78015 -33.28179 -33.15378 -31.47581 -30.71897 -30.20992 -27.01188 -26.91648 -26.37071 -24.53710 -23.65845 -22.86474 -22.56450 -22.23465 -21.20233 -20.77546 -19.47955 -18.94394 -18.22367 -18.05549 -17.51993 -17.02160 -16.96069 -16.29794 -16.10035 -15.90500 -15.79686 -15.55708 -15.44398 -15.28505 -15.12544 -15.06717 -14.80621 -14.72184 -14.49572 -14.37404 -14.32171 -14.01090 -13.61481 -13.52778 -13.35059 -13.12472 -12.98873 -12.67660 -12.52180 -12.28418 -12.27742 -12.07089 -11.97512 -11.92456 -11.79525 -11.53803 -11.27409 -11.09157 -10.80057 -10.75772 -10.46939 -10.28718 -10.08669 -9.36609 -8.78736 -4.96652 -0.32581 0.36539 1.39321 1.42490 1.72012 1.88891 1.91489 2.06084 2.24525 2.85964 3.13991 3.36818 3.42769 3.59972 3.63557 3.74279 3.77692 3.87744 3.89608 3.92821 3.95464 4.07255 4.10816 4.11278 4.15060 4.20934 4.24446 4.30224 4.36630 4.49568 4.49808 4.57450 4.58705 4.59997 4.68657 4.76243 4.77339 4.83939 4.95709 4.97803 4.98217 4.99472 5.03789 5.10266 5.13796 5.20769 5.28480 5.32680 5.35847 5.41030 5.46139 5.47062 5.52929 5.61788 5.97942 6.44983 6.54471 6.87082 6.91444 7.12703 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.038 4.038 3 Si 0.793 3.207 4 C -0.234 4.234 5 C 0.096 3.904 6 N -0.578 5.578 7 C 0.066 3.934 8 C -0.067 4.067 9 C -0.137 4.137 10 C 0.562 3.438 11 O -0.582 6.582 12 N -0.702 5.702 13 C 0.158 3.842 14 C -0.088 4.088 15 C -0.108 4.108 16 C -0.081 4.081 17 C -0.110 4.110 18 C -0.085 4.085 19 C -0.132 4.132 20 C 0.135 3.865 21 O -0.580 6.580 22 C -0.133 4.133 23 C -0.099 4.099 24 C -0.107 4.107 25 C -0.085 4.085 26 C -0.081 4.081 27 H 0.393 0.607 28 H 0.097 0.903 29 H -0.286 1.286 30 H -0.306 1.306 31 H 0.219 0.781 32 H 0.435 0.565 33 H 0.127 0.873 34 H 0.412 0.588 35 H 0.065 0.935 36 H 0.055 0.945 37 H 0.061 0.939 38 H 0.070 0.930 39 H 0.089 0.911 40 H 0.087 0.913 41 H 0.077 0.923 42 H 0.091 0.909 43 H 0.061 0.939 44 H 0.092 0.908 45 H 0.391 0.609 46 H 0.083 0.917 47 H 0.061 0.939 48 H 0.054 0.946 49 H 0.063 0.937 50 H 0.150 0.850 51 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.385 3.671 -2.724 5.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.148 4.148 3 Si 0.699 3.301 4 C -0.242 4.242 5 C -0.033 4.033 6 N -0.181 5.181 7 C -0.041 4.041 8 C -0.089 4.089 9 C -0.141 4.141 10 C 0.351 3.649 11 O -0.463 6.463 12 N -0.354 5.354 13 C 0.053 3.947 14 C -0.107 4.107 15 C -0.146 4.146 16 C -0.100 4.100 17 C -0.148 4.148 18 C -0.104 4.104 19 C -0.170 4.170 20 C 0.095 3.905 21 O -0.389 6.389 22 C -0.171 4.171 23 C -0.137 4.137 24 C -0.126 4.126 25 C -0.103 4.103 26 C -0.087 4.087 27 H 0.243 0.757 28 H 0.114 0.886 29 H -0.213 1.213 30 H -0.234 1.234 31 H 0.235 0.765 32 H 0.275 0.725 33 H 0.145 0.855 34 H 0.252 0.748 35 H 0.083 0.917 36 H 0.074 0.926 37 H 0.080 0.920 38 H 0.088 0.912 39 H 0.107 0.893 40 H 0.105 0.895 41 H 0.095 0.905 42 H 0.109 0.891 43 H 0.080 0.920 44 H 0.110 0.890 45 H 0.241 0.759 46 H 0.101 0.899 47 H 0.080 0.920 48 H 0.073 0.927 49 H 0.082 0.918 50 H 0.168 0.832 51 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -1.969 4.117 -2.443 5.177 hybrid contribution 0.073 -0.903 -0.099 0.912 sum -1.896 3.214 -2.543 4.515 Atomic orbital electron populations 1.86459 1.17843 1.82302 1.50262 1.24525 0.84638 1.10104 0.95522 0.94060 0.77094 0.73685 0.85277 1.20852 1.12541 0.91489 0.99292 1.22363 0.97167 0.95778 0.88027 1.41824 1.54105 1.03267 1.18879 1.18117 1.03882 0.86856 0.95212 1.20128 0.99831 0.88887 1.00007 1.19454 1.06192 0.91703 0.96736 1.18400 0.76955 0.85425 0.84163 1.90765 1.46540 1.86832 1.22165 1.45845 1.63228 1.05128 1.21225 1.20903 0.94962 0.80635 0.98199 1.21310 0.96856 0.95193 0.97371 1.21559 0.99422 1.00363 0.93257 1.21074 0.94934 0.93595 1.00361 1.21647 0.96715 1.02513 0.93888 1.21270 0.98584 0.94127 0.96376 1.22136 0.96963 0.96312 1.01571 1.21091 0.94311 0.82187 0.92948 1.86533 1.63128 1.19742 1.69487 1.22184 1.02660 0.97763 0.94483 1.21377 0.99101 0.93594 0.99623 1.20866 0.99695 0.98059 0.94030 1.20396 0.99147 0.90712 1.00083 1.19580 1.00943 0.94319 0.93827 0.75714 0.88571 1.21257 1.23384 0.76488 0.72512 0.85514 0.74817 0.91655 0.92629 0.92032 0.91163 0.89257 0.89486 0.90471 0.89057 0.92030 0.88979 0.75878 0.89871 0.92027 0.92723 0.91795 0.83242 0.84448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.25 12.88 -148.98 -1.92 -1.67 16 2 C -0.04 0.06 3.06 71.24 0.22 0.28 16 3 Si 0.79 -4.00 30.75 68.60 2.11 -1.89 16 4 C -0.23 0.18 5.57 -18.65 -0.10 0.08 16 5 C 0.10 -0.56 10.43 83.09 0.87 0.31 16 6 N -0.58 1.98 6.07 -187.71 -1.14 0.85 16 7 C 0.07 0.22 7.26 38.96 0.28 0.50 16 8 C -0.07 -0.40 9.61 22.63 0.22 -0.18 16 9 C -0.14 -0.73 5.87 -20.07 -0.12 -0.85 16 10 C 0.56 4.41 7.72 86.71 0.67 5.08 16 11 O -0.58 -9.37 15.97 -3.98 -0.06 -9.43 16 12 N -0.70 -0.82 4.18 -445.66 -1.86 -2.68 16 13 C 0.16 0.37 2.05 44.99 0.09 0.46 16 14 C -0.09 -0.31 2.88 -10.78 -0.03 -0.35 16 15 C -0.11 0.05 5.04 30.59 0.15 0.21 16 16 C -0.08 0.34 3.20 -10.76 -0.03 0.31 16 17 C -0.11 0.72 5.02 30.60 0.15 0.87 16 18 C -0.08 0.27 2.88 -10.80 -0.03 0.23 16 19 C -0.13 0.26 4.82 30.59 0.15 0.41 16 20 C 0.13 0.08 1.15 -10.80 -0.01 0.07 16 21 O -0.58 -1.64 12.98 -148.98 -1.93 -3.57 16 22 C -0.13 0.35 4.82 30.63 0.15 0.49 16 23 C -0.10 -0.47 4.85 30.61 0.15 -0.33 16 24 C -0.11 -0.09 9.46 22.28 0.21 0.12 16 25 C -0.08 -0.20 10.03 22.20 0.22 0.02 16 26 C -0.08 -0.30 6.35 -20.14 -0.13 -0.43 16 27 H 0.39 -3.42 8.70 -74.06 -0.64 -4.07 16 28 H 0.10 0.07 7.96 -2.38 -0.02 0.05 16 29 H -0.29 0.03 7.11 99.48 0.71 0.73 16 30 H -0.31 -1.09 7.11 99.48 0.71 -0.38 16 31 H 0.22 -3.23 6.35 -2.91 -0.02 -3.24 16 32 H 0.43 -3.88 8.96 -92.71 -0.83 -4.71 16 33 H 0.13 0.86 7.62 -2.91 -0.02 0.84 16 34 H 0.41 -1.86 4.86 -92.71 -0.45 -2.31 16 35 H 0.07 0.52 7.58 -2.39 -0.02 0.50 16 36 H 0.06 0.49 8.14 -2.39 -0.02 0.47 16 37 H 0.06 0.04 8.14 -2.39 -0.02 0.03 16 38 H 0.07 -0.09 7.60 -2.39 -0.02 -0.10 16 39 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 40 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 41 H 0.08 -0.68 6.51 -2.39 -0.02 -0.70 16 42 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 43 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 44 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 45 H 0.39 -2.07 9.04 -74.06 -0.67 -2.74 16 46 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 47 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 48 H 0.05 0.43 8.14 -2.38 -0.02 0.41 16 49 H 0.06 0.40 8.14 -2.39 -0.02 0.38 16 50 H 0.15 -0.85 6.36 -2.91 -0.02 -0.87 16 51 H 0.14 0.00 8.06 -2.91 -0.02 -0.02 16 Total: 0.00 -26.26 388.26 -3.28 -29.54 By element: Atomic # 1 Polarization: -16.90 SS G_CDS: -1.55 Total: -18.45 kcal Atomic # 6 Polarization: 4.23 SS G_CDS: 3.07 Total: 7.30 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -3.00 Total: -1.84 kcal Atomic # 8 Polarization: -10.76 SS G_CDS: -3.92 Total: -14.67 kcal Atomic # 14 Polarization: -4.00 SS G_CDS: 2.11 Total: -1.89 kcal Total: -26.26 -3.28 -29.54 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_12335838.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.406 kcal (2) G-P(sol) polarization free energy of solvation -26.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.667 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.545 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.951 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds