Wall clock time and date at job start Thu Mar 4 2021 18:01:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86295 * 109.46983 * 2 1 4 4 C 1.50701 * 109.46809 * 240.00717 * 2 1 3 5 5 C 1.38314 * 119.92337 * 120.02298 * 4 2 1 6 6 C 1.38471 * 120.28493 * 179.97438 * 5 4 2 7 7 Br 1.89094 * 119.94033 * 179.97438 * 6 5 4 8 8 C 1.38030 * 120.12038 * 359.71698 * 6 5 4 9 9 C 1.39585 * 119.84318 * 0.55444 * 8 6 5 10 10 C 1.47850 * 120.13919 * 179.71800 * 9 8 6 11 11 O 1.21556 * 119.99733 * 179.72255 * 10 9 8 12 12 N 1.34773 * 119.99937 * 359.73213 * 10 9 8 13 13 C 1.46499 * 120.00031 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47695 * 204.99801 * 13 12 10 15 15 C 1.52997 * 109.47457 * 179.97438 * 14 13 12 16 16 C 1.53002 * 109.46817 * 60.00169 * 15 14 13 17 17 C 1.52996 * 109.47346 * 299.99737 * 16 15 14 18 18 C 1.53002 * 109.46891 * 59.99997 * 17 16 15 19 19 C 1.52997 * 109.46978 * 60.00410 * 18 17 16 20 20 C 1.53006 * 109.47164 * 299.99874 * 19 18 17 21 21 O 1.42895 * 109.47000 * 180.02562 * 20 19 18 22 22 C 1.52997 * 109.47127 * 59.99836 * 20 19 18 23 23 C 1.52999 * 109.46623 * 299.99900 * 20 19 18 24 24 C 1.37986 * 119.91832 * 299.99416 * 4 2 1 25 25 H 0.96697 * 113.99436 * 299.99706 * 1 2 3 26 26 H 1.08999 * 109.47276 * 120.00493 * 2 1 3 27 27 H 1.48504 * 110.00509 * 300.00345 * 3 2 1 28 28 H 1.48508 * 109.99929 * 61.32226 * 3 2 1 29 29 H 1.07998 * 119.86211 * 359.97438 * 5 4 2 30 30 H 1.08003 * 120.07991 * 180.30002 * 8 6 5 31 31 H 0.96998 * 120.00452 * 359.97438 * 12 10 9 32 32 H 1.09004 * 109.47041 * 324.99924 * 13 12 10 33 33 H 1.09001 * 109.46989 * 59.99548 * 14 13 12 34 34 H 1.08993 * 109.47194 * 299.99651 * 15 14 13 35 35 H 1.09002 * 109.46695 * 179.97438 * 15 14 13 36 36 H 1.09004 * 109.46733 * 179.97438 * 16 15 14 37 37 H 1.08992 * 109.47554 * 180.02562 * 17 16 15 38 38 H 1.09004 * 109.47108 * 300.00289 * 17 16 15 39 39 H 1.09002 * 109.47097 * 180.02562 * 18 17 16 40 40 H 1.09001 * 109.47375 * 59.99908 * 19 18 17 41 41 H 1.09000 * 109.47140 * 179.97438 * 19 18 17 42 42 H 0.96696 * 114.00485 * 299.99339 * 21 20 19 43 43 H 1.09002 * 109.47153 * 180.02562 * 22 20 19 44 44 H 1.09001 * 109.46832 * 60.00321 * 22 20 19 45 45 H 1.09000 * 109.47486 * 299.99829 * 23 20 19 46 46 H 1.09002 * 109.46716 * 179.97438 * 23 20 19 47 47 H 1.07999 * 120.06875 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7268 -0.0366 -2.1397 6 6 3.1928 -0.6821 -3.2726 7 35 4.2791 0.2485 -4.5095 8 6 2.8703 -2.0051 -3.4981 9 6 2.0632 -2.6883 -2.5870 10 6 1.7085 -4.1038 -2.8252 11 8 1.0096 -4.6977 -2.0275 12 7 2.1603 -4.7354 -3.9267 13 6 1.8093 -6.1381 -4.1625 14 6 2.8716 -6.7871 -5.0520 15 6 2.5053 -8.2522 -5.2977 16 6 1.1437 -8.3280 -5.9913 17 6 0.0814 -7.6790 -5.1019 18 6 0.4477 -6.2140 -4.8561 19 6 0.5146 -5.4738 -6.1935 20 6 1.5769 -6.1228 -7.0830 21 8 1.6398 -5.4311 -8.3318 22 6 1.2107 -7.5879 -7.3287 23 6 2.9385 -6.0469 -6.3893 24 6 1.5970 -2.0313 -1.4474 25 1 -0.3932 0.4417 0.7651 26 1 1.7924 -0.5139 0.8899 27 1 1.5615 2.4680 -1.2084 28 1 1.5879 2.4585 1.2243 29 1 2.9856 0.9973 -1.9653 30 1 3.2382 -2.5093 -4.3796 31 1 2.7178 -4.2614 -4.5634 32 1 1.7613 -6.6657 -3.2099 33 1 3.8416 -6.7334 -4.5576 34 1 2.4577 -8.7795 -4.3450 35 1 3.2620 -8.7143 -5.9317 36 1 0.8830 -9.3717 -6.1668 37 1 -0.8887 -7.7334 -5.5958 38 1 0.0336 -8.2064 -4.1491 39 1 -0.3089 -5.7517 -4.2221 40 1 -0.4555 -5.5278 -6.6876 41 1 0.7751 -4.4300 -6.0184 42 1 0.8096 -5.4381 -8.8276 43 1 1.9677 -8.0503 -7.9620 44 1 0.2406 -7.6419 -7.8229 45 1 3.1995 -5.0031 -6.2143 46 1 3.6953 -6.5096 -7.0228 47 1 0.9758 -2.5560 -0.7365 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:01:13 Heat of formation + Delta-G solvation = -91.378771 kcal Electronic energy + Delta-G solvation = -31739.027944 eV Core-core repulsion = 27512.382938 eV Total energy + Delta-G solvation = -4226.645006 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.077 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -42.91820 -41.36476 -39.84521 -37.83576 -37.49637 -35.90195 -33.78145 -33.70946 -33.54009 -32.21808 -31.39348 -30.49219 -27.24723 -26.99983 -26.87125 -25.01345 -22.95756 -22.67486 -22.47066 -22.31435 -21.09627 -19.37893 -18.65388 -18.54757 -17.97501 -17.67614 -17.30297 -16.51157 -16.36231 -16.25492 -15.90754 -15.51296 -15.48014 -15.31059 -15.24419 -14.89037 -14.84499 -14.64890 -14.36087 -14.18825 -14.02760 -13.72388 -13.67382 -13.54773 -13.36396 -13.05507 -12.84363 -12.45049 -12.21154 -12.06947 -12.03299 -11.95275 -11.90930 -11.88445 -11.63640 -11.47911 -11.25781 -11.16233 -10.81974 -10.66309 -10.46679 -10.31780 -10.06450 -9.91767 -4.99275 -0.54437 -0.18624 0.39708 1.18514 1.49536 1.54853 1.87680 1.93782 2.42267 3.09531 3.12123 3.31201 3.41525 3.46031 3.54764 3.75520 3.77921 3.84733 3.86951 3.94999 3.95605 4.07064 4.13246 4.14415 4.16786 4.20345 4.23893 4.27653 4.29152 4.47659 4.55745 4.64826 4.66045 4.68698 4.73550 4.88700 4.91286 4.95717 4.98419 5.00632 5.04315 5.06788 5.09688 5.14959 5.24649 5.30390 5.34471 5.39226 5.45516 5.45983 6.31051 6.51856 6.82900 6.99071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.087 4.087 3 Si 0.757 3.243 4 C -0.078 4.078 5 C -0.062 4.062 6 C -0.098 4.098 7 Br -0.026 7.026 8 C -0.047 4.047 9 C -0.137 4.137 10 C 0.562 3.438 11 O -0.568 6.568 12 N -0.706 5.706 13 C 0.156 3.844 14 C -0.083 4.083 15 C -0.109 4.109 16 C -0.083 4.083 17 C -0.108 4.108 18 C -0.090 4.090 19 C -0.132 4.132 20 C 0.137 3.863 21 O -0.575 6.575 22 C -0.134 4.134 23 C -0.102 4.102 24 C -0.029 4.029 25 H 0.399 0.601 26 H 0.104 0.896 27 H -0.291 1.291 28 H -0.278 1.278 29 H 0.156 0.844 30 H 0.157 0.843 31 H 0.409 0.591 32 H 0.079 0.921 33 H 0.095 0.905 34 H 0.073 0.927 35 H 0.082 0.918 36 H 0.086 0.914 37 H 0.070 0.930 38 H 0.066 0.934 39 H 0.055 0.945 40 H 0.069 0.931 41 H 0.061 0.939 42 H 0.389 0.611 43 H 0.072 0.928 44 H 0.070 0.930 45 H 0.068 0.932 46 H 0.079 0.921 47 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.584 -0.678 -0.647 3.704 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.195 4.195 3 Si 0.661 3.339 4 C -0.079 4.079 5 C -0.082 4.082 6 C -0.178 4.178 7 Br 0.060 6.940 8 C -0.068 4.068 9 C -0.141 4.141 10 C 0.350 3.650 11 O -0.448 6.448 12 N -0.358 5.358 13 C 0.052 3.948 14 C -0.102 4.102 15 C -0.147 4.147 16 C -0.102 4.102 17 C -0.146 4.146 18 C -0.110 4.110 19 C -0.170 4.170 20 C 0.096 3.904 21 O -0.383 6.383 22 C -0.172 4.172 23 C -0.139 4.139 24 C -0.048 4.048 25 H 0.250 0.750 26 H 0.122 0.878 27 H -0.218 1.218 28 H -0.204 1.204 29 H 0.173 0.827 30 H 0.175 0.825 31 H 0.248 0.752 32 H 0.097 0.903 33 H 0.114 0.886 34 H 0.092 0.908 35 H 0.100 0.900 36 H 0.104 0.896 37 H 0.088 0.912 38 H 0.085 0.915 39 H 0.073 0.927 40 H 0.087 0.913 41 H 0.079 0.921 42 H 0.238 0.762 43 H 0.090 0.910 44 H 0.089 0.911 45 H 0.087 0.913 46 H 0.097 0.903 47 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 4.010 -0.150 -0.924 4.117 hybrid contribution -2.126 -0.092 0.444 2.174 sum 1.884 -0.243 -0.480 1.959 Atomic orbital electron populations 1.86543 1.18104 1.80831 1.51275 1.25031 0.84491 1.12069 0.97928 0.94284 0.90286 0.71912 0.77446 1.19374 0.98334 0.93608 0.96564 1.21319 0.95083 1.00311 0.91462 1.21694 1.03151 0.95715 0.97192 1.96847 1.65387 1.75328 1.56474 1.21415 0.94374 0.92491 0.98480 1.19901 1.02604 0.93951 0.97639 1.18286 0.79263 0.86221 0.81261 1.90787 1.39175 1.67895 1.46963 1.45973 1.52808 1.13360 1.23610 1.21011 0.94363 0.80588 0.98840 1.21312 0.98653 0.95780 0.94465 1.21582 0.97085 0.94422 1.01566 1.21064 0.95070 0.99920 0.94118 1.21553 0.98999 0.93759 1.00282 1.21328 0.96672 0.97031 0.95983 1.22136 0.99647 0.99497 0.95704 1.21072 0.95164 0.90792 0.83337 1.86512 1.40678 1.77788 1.33356 1.22174 1.02379 0.95020 0.97629 1.21470 0.95912 1.01007 0.95545 1.21254 0.94565 0.93631 0.95375 0.75018 0.87847 1.21824 1.20426 0.82726 0.82518 0.75231 0.90286 0.88639 0.90812 0.89987 0.89610 0.91178 0.91500 0.92687 0.91253 0.92064 0.76194 0.90961 0.91142 0.91318 0.90283 0.84905 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.19 12.74 -148.98 -1.90 -3.09 16 2 C -0.09 0.09 2.81 71.24 0.20 0.29 16 3 Si 0.76 -2.25 29.78 68.60 2.04 -0.21 16 4 C -0.08 -0.16 5.42 -19.91 -0.11 -0.27 16 5 C -0.06 -0.02 8.41 22.34 0.19 0.17 16 6 C -0.10 -0.03 6.22 22.28 0.14 0.11 16 7 Br -0.03 0.01 33.69 -20.37 -0.69 -0.67 16 8 C -0.05 0.01 9.28 22.55 0.21 0.22 16 9 C -0.14 -0.53 5.87 -20.09 -0.12 -0.64 16 10 C 0.56 3.55 7.74 86.79 0.67 4.22 16 11 O -0.57 -7.95 16.01 -3.89 -0.06 -8.01 16 12 N -0.71 -0.36 4.19 -445.40 -1.86 -2.22 16 13 C 0.16 0.07 2.05 44.99 0.09 0.16 16 14 C -0.08 0.30 2.88 -10.79 -0.03 0.26 16 15 C -0.11 0.47 5.19 30.59 0.16 0.63 16 16 C -0.08 0.30 3.19 -10.79 -0.03 0.27 16 17 C -0.11 0.14 5.19 30.59 0.16 0.30 16 18 C -0.09 -0.10 2.88 -10.79 -0.03 -0.13 16 19 C -0.13 0.06 4.66 30.60 0.14 0.21 16 20 C 0.14 -0.24 1.15 -10.79 -0.01 -0.25 16 21 O -0.58 -0.09 12.98 -148.98 -1.93 -2.03 16 22 C -0.13 0.43 4.82 30.59 0.15 0.58 16 23 C -0.10 0.28 4.67 30.60 0.14 0.42 16 24 C -0.03 -0.15 9.15 22.53 0.21 0.06 16 25 H 0.40 -2.43 8.74 -74.06 -0.65 -3.08 16 26 H 0.10 -0.53 7.96 -2.39 -0.02 -0.55 16 27 H -0.29 -1.14 7.11 99.48 0.71 -0.43 16 28 H -0.28 -0.24 7.11 99.48 0.71 0.47 16 29 H 0.16 -0.48 4.86 -2.91 -0.01 -0.49 16 30 H 0.16 -0.79 6.41 -2.91 -0.02 -0.81 16 31 H 0.41 -1.51 4.90 -92.71 -0.45 -1.96 16 32 H 0.08 0.33 7.58 -2.38 -0.02 0.31 16 33 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 34 H 0.07 -0.33 8.14 -2.39 -0.02 -0.34 16 35 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 36 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 37 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 38 H 0.07 -0.04 8.14 -2.38 -0.02 -0.05 16 39 H 0.05 0.35 8.14 -2.39 -0.02 0.33 16 40 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 41 H 0.06 0.08 7.61 -2.39 -0.02 0.06 16 42 H 0.39 -2.28 9.05 -74.06 -0.67 -2.95 16 43 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 44 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 45 H 0.07 -0.23 6.51 -2.39 -0.02 -0.24 16 46 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 47 H 0.13 1.00 7.65 -2.91 -0.02 0.97 16 Total: 0.00 -17.73 375.99 -2.98 -20.71 By element: Atomic # 1 Polarization: -10.40 SS G_CDS: -0.70 Total: -11.10 kcal Atomic # 6 Polarization: 4.49 SS G_CDS: 2.12 Total: 6.61 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -1.86 Total: -2.22 kcal Atomic # 8 Polarization: -9.23 SS G_CDS: -3.89 Total: -13.12 kcal Atomic # 14 Polarization: -2.25 SS G_CDS: 2.04 Total: -0.21 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.67 kcal Total: -17.73 -2.98 -20.71 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.668 kcal (2) G-P(sol) polarization free energy of solvation -17.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.978 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.379 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds