Wall clock time and date at job start Thu Mar 4 2021 18:01:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86297 * 109.47245 * 2 1 4 4 C 1.50697 * 109.46830 * 119.99688 * 2 1 3 5 5 C 1.38409 * 119.82530 * 64.99982 * 4 2 1 6 6 C 1.37887 * 120.16817 * 179.97438 * 5 4 2 7 7 C 1.39838 * 119.82876 * 0.02562 * 6 5 4 8 8 C 1.47207 * 120.16939 * 179.97438 * 7 6 5 9 9 C 1.34807 * 119.99752 * 179.97438 * 8 7 6 10 10 C 1.46430 * 119.99970 * 180.02562 * 9 8 7 11 11 O 1.21698 * 120.00228 * 0.02562 * 10 9 8 12 12 N 1.34780 * 120.00145 * 180.02562 * 10 9 8 13 13 C 1.46500 * 119.99944 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.46927 * 155.00048 * 13 12 10 15 15 C 1.52997 * 109.47457 * 59.99484 * 14 13 12 16 16 C 1.53002 * 109.46817 * 60.00169 * 15 14 13 17 17 C 1.52996 * 109.47346 * 299.99737 * 16 15 14 18 18 C 1.53002 * 109.46891 * 59.99997 * 17 16 15 19 19 C 1.52997 * 109.46978 * 60.00410 * 18 17 16 20 20 C 1.53006 * 109.47164 * 299.99874 * 19 18 17 21 21 O 1.42895 * 109.47000 * 180.02562 * 20 19 18 22 22 C 1.52997 * 109.47127 * 59.99836 * 20 19 18 23 23 C 1.52999 * 109.46623 * 299.99900 * 20 19 18 24 24 C 1.39840 * 119.65877 * 0.24784 * 7 6 5 25 25 C 1.37890 * 119.82334 * 359.51547 * 24 7 6 26 26 H 0.96705 * 113.99298 * 300.00150 * 1 2 3 27 27 H 1.09004 * 109.46571 * 239.99624 * 2 1 3 28 28 H 1.48510 * 109.99742 * 299.99983 * 3 2 1 29 29 H 1.48500 * 110.00230 * 61.31768 * 3 2 1 30 30 H 1.07996 * 119.91351 * 359.97438 * 5 4 2 31 31 H 1.08001 * 120.08895 * 179.97438 * 6 5 4 32 32 H 1.07999 * 120.00081 * 0.02562 * 8 7 6 33 33 H 1.07999 * 120.00167 * 0.02562 * 9 8 7 34 34 H 0.97001 * 119.99485 * 359.97438 * 12 10 9 35 35 H 1.09000 * 109.47381 * 34.99693 * 13 12 10 36 36 H 1.09001 * 109.46989 * 299.99155 * 14 13 12 37 37 H 1.08993 * 109.47194 * 299.99651 * 15 14 13 38 38 H 1.09002 * 109.46695 * 179.97438 * 15 14 13 39 39 H 1.09004 * 109.46733 * 179.97438 * 16 15 14 40 40 H 1.08992 * 109.47554 * 180.02562 * 17 16 15 41 41 H 1.09004 * 109.47108 * 300.00289 * 17 16 15 42 42 H 1.09002 * 109.47097 * 180.02562 * 18 17 16 43 43 H 1.09000 * 109.47140 * 179.97438 * 19 18 17 44 44 H 1.09001 * 109.47375 * 59.99908 * 19 18 17 45 45 H 0.96696 * 114.00485 * 299.99339 * 21 20 19 46 46 H 1.09002 * 109.47153 * 180.02562 * 22 20 19 47 47 H 1.09001 * 109.46832 * 60.00321 * 22 20 19 48 48 H 1.09000 * 109.47486 * 299.99829 * 23 20 19 49 49 H 1.09002 * 109.46716 * 179.97438 * 23 20 19 50 50 H 1.08001 * 120.08111 * 179.74578 * 24 7 6 51 51 H 1.08005 * 119.91069 * 180.23068 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6823 -2.0619 1.3950 6 6 2.1390 -2.7190 2.5179 7 6 2.8550 -2.0162 3.4921 8 6 3.3456 -2.7102 4.6940 9 6 4.0358 -2.0294 5.6307 10 6 4.5244 -2.7198 6.8261 11 8 4.3076 -3.9082 6.9738 12 7 5.2141 -2.0391 7.7629 13 6 5.7033 -2.7299 8.9586 14 6 6.9148 -1.9827 9.5194 15 6 6.5081 -0.5541 9.8863 16 6 5.4006 -0.5942 10.9411 17 6 4.1889 -1.3414 10.3804 18 6 4.5957 -2.7699 10.0134 19 6 5.1065 -3.4914 11.2622 20 6 6.3182 -2.7442 11.8231 21 8 6.7957 -3.4184 12.9890 22 6 5.9115 -1.3156 12.1899 23 6 7.4257 -2.7042 10.7682 24 6 3.0975 -0.6496 3.3213 25 6 2.6385 -0.0077 2.1905 26 1 -0.3932 0.4418 0.7651 27 1 1.7923 -0.5139 -0.8900 28 1 1.5615 2.4678 -1.2086 29 1 1.5880 2.4586 1.2242 30 1 1.1289 -2.6031 0.6419 31 1 1.9436 -3.7735 2.6451 32 1 3.1532 -3.7648 4.8251 33 1 4.2286 -0.9749 5.4995 34 1 5.3871 -1.0920 7.6450 35 1 5.9931 -3.7477 8.6972 36 1 7.7039 -1.9542 8.7680 37 1 6.1442 -0.0402 8.9967 38 1 7.3712 -0.0220 10.2862 39 1 5.1111 0.4236 11.2028 40 1 3.3997 -1.3696 11.1316 41 1 3.8249 -0.8274 9.4907 42 1 3.7326 -3.3021 9.6135 43 1 5.3959 -4.5093 11.0009 44 1 4.3175 -3.5200 12.0137 45 1 6.1447 -3.4814 13.7012 46 1 6.7748 -0.7832 12.5891 47 1 5.1224 -1.3442 12.9414 48 1 7.7155 -3.7220 10.5068 49 1 8.2888 -2.1716 11.1676 50 1 3.6462 -0.0994 4.0713 51 1 2.8282 1.0469 2.0554 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_12360594.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:01:26 Heat of formation + Delta-G solvation = -84.161096 kcal Electronic energy + Delta-G solvation = -31704.514510 eV Core-core repulsion = 27534.236729 eV Total energy + Delta-G solvation = -4170.277781 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.182 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.84433 -40.78015 -40.28231 -37.93807 -37.61021 -35.36952 -35.08372 -33.76147 -33.15866 -32.21368 -31.53560 -30.78157 -27.54946 -26.99550 -26.37380 -24.21135 -23.82155 -22.79765 -22.54147 -22.45154 -21.53960 -20.47352 -18.96214 -18.71761 -18.17833 -18.00643 -17.17321 -16.73901 -16.60499 -16.19610 -16.19099 -15.88372 -15.81843 -15.43216 -15.26788 -15.14522 -15.03753 -14.97141 -14.52444 -14.40784 -14.22194 -14.12939 -13.81795 -13.58092 -13.53582 -13.39714 -13.29099 -13.06425 -13.01557 -12.55194 -12.27925 -12.08413 -12.05249 -11.96167 -11.83332 -11.59143 -11.38821 -11.34480 -11.24385 -11.06429 -10.83980 -10.61231 -10.42100 -10.04613 -9.97904 -9.24954 -4.91526 -0.54982 0.39753 0.89078 1.30886 1.59680 1.96922 2.14492 2.24258 2.80918 3.13375 3.40245 3.41014 3.43904 3.55569 3.68795 3.79487 3.81518 3.88208 3.94685 3.96011 4.06405 4.10639 4.17607 4.18564 4.20964 4.23446 4.26078 4.36021 4.38629 4.45259 4.55892 4.58448 4.61340 4.68744 4.76883 4.84649 4.85740 4.96832 4.99409 5.00144 5.02033 5.04247 5.09659 5.11013 5.14555 5.17573 5.31226 5.35279 5.38278 5.39628 5.47297 5.48305 5.53128 5.60223 5.90245 6.46746 6.54944 6.82733 7.22766 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.089 4.089 3 Si 0.772 3.228 4 C -0.109 4.109 5 C -0.107 4.107 6 C -0.104 4.104 7 C -0.080 4.080 8 C -0.022 4.022 9 C -0.206 4.206 10 C 0.542 3.458 11 O -0.592 6.592 12 N -0.702 5.702 13 C 0.158 3.842 14 C -0.082 4.082 15 C -0.111 4.111 16 C -0.081 4.081 17 C -0.105 4.105 18 C -0.089 4.089 19 C -0.134 4.134 20 C 0.134 3.866 21 O -0.579 6.579 22 C -0.134 4.134 23 C -0.099 4.099 24 C -0.094 4.094 25 C -0.123 4.123 26 H 0.386 0.614 27 H 0.123 0.877 28 H -0.307 1.307 29 H -0.276 1.276 30 H 0.129 0.871 31 H 0.135 0.865 32 H 0.120 0.880 33 H 0.165 0.835 34 H 0.416 0.584 35 H 0.061 0.939 36 H 0.093 0.907 37 H 0.084 0.916 38 H 0.080 0.920 39 H 0.090 0.910 40 H 0.064 0.936 41 H 0.072 0.928 42 H 0.053 0.947 43 H 0.054 0.946 44 H 0.074 0.926 45 H 0.389 0.611 46 H 0.071 0.929 47 H 0.070 0.930 48 H 0.057 0.943 49 H 0.078 0.922 50 H 0.158 0.842 51 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.352 7.086 0.766 7.505 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.197 4.197 3 Si 0.677 3.323 4 C -0.109 4.109 5 C -0.125 4.125 6 C -0.122 4.122 7 C -0.080 4.080 8 C -0.042 4.042 9 C -0.227 4.227 10 C 0.332 3.668 11 O -0.475 6.475 12 N -0.353 5.353 13 C 0.053 3.947 14 C -0.101 4.101 15 C -0.148 4.148 16 C -0.100 4.100 17 C -0.143 4.143 18 C -0.109 4.109 19 C -0.172 4.172 20 C 0.094 3.906 21 O -0.388 6.388 22 C -0.172 4.172 23 C -0.137 4.137 24 C -0.112 4.112 25 C -0.140 4.140 26 H 0.235 0.765 27 H 0.141 0.859 28 H -0.236 1.236 29 H -0.203 1.203 30 H 0.147 0.853 31 H 0.152 0.848 32 H 0.138 0.862 33 H 0.183 0.817 34 H 0.255 0.745 35 H 0.079 0.921 36 H 0.111 0.889 37 H 0.102 0.898 38 H 0.098 0.902 39 H 0.108 0.892 40 H 0.083 0.917 41 H 0.091 0.909 42 H 0.072 0.928 43 H 0.073 0.927 44 H 0.093 0.907 45 H 0.239 0.761 46 H 0.090 0.910 47 H 0.089 0.911 48 H 0.076 0.924 49 H 0.097 0.903 50 H 0.176 0.824 51 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.643 6.739 -0.010 7.239 hybrid contribution -1.823 -0.527 0.767 2.046 sum 0.821 6.212 0.757 6.312 Atomic orbital electron populations 1.86589 1.18566 1.80432 1.50182 1.25332 0.83439 1.12233 0.98719 0.94017 0.90179 0.71682 0.76407 1.20529 0.98833 0.94756 0.96826 1.21084 0.99289 0.94240 0.97878 1.21608 0.96572 1.00654 0.93382 1.19113 1.00020 0.94304 0.94532 1.22351 0.91465 0.99488 0.90901 1.23012 1.03424 1.02152 0.94072 1.18778 0.77706 0.86316 0.83984 1.90821 1.59272 1.17589 1.79812 1.45827 1.55541 1.13857 1.20121 1.20834 0.93601 0.96216 0.84083 1.21263 0.96200 0.95820 0.96803 1.21648 0.99037 0.94756 0.99376 1.21059 0.94870 0.99608 0.94449 1.21536 0.97652 0.93826 1.01248 1.21299 0.97605 0.97399 0.94624 1.22143 0.98276 0.99048 0.97762 1.21131 0.92847 0.91202 0.85413 1.86520 1.44984 1.80044 1.27207 1.22171 1.01621 0.95039 0.98327 1.21399 0.97595 1.00974 0.93777 1.21652 0.98511 0.93094 0.97922 1.21217 0.98316 1.00656 0.93810 0.76455 0.85907 1.23613 1.20260 0.85340 0.84753 0.86229 0.81737 0.74530 0.92075 0.88893 0.89790 0.90174 0.89217 0.91742 0.90918 0.92829 0.92742 0.90704 0.76124 0.90982 0.91096 0.92421 0.90301 0.82439 0.83371 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.96 12.83 -148.98 -1.91 -2.88 16 2 C -0.09 0.17 2.80 71.23 0.20 0.37 16 3 Si 0.77 -3.02 29.87 68.60 2.05 -0.97 16 4 C -0.11 0.18 5.36 -19.79 -0.11 0.07 16 5 C -0.11 -0.02 9.66 22.23 0.21 0.20 16 6 C -0.10 -0.02 9.80 22.57 0.22 0.20 16 7 C -0.08 0.06 5.87 -20.15 -0.12 -0.06 16 8 C -0.02 -0.01 9.46 23.84 0.23 0.21 16 9 C -0.21 0.41 9.41 23.62 0.22 0.63 16 10 C 0.54 2.01 7.71 86.38 0.67 2.67 16 11 O -0.59 -8.09 15.89 -4.34 -0.07 -8.16 16 12 N -0.70 1.57 4.23 -446.75 -1.89 -0.32 16 13 C 0.16 0.09 2.05 44.99 0.09 0.18 16 14 C -0.08 0.28 2.88 -10.79 -0.03 0.25 16 15 C -0.11 0.80 5.02 30.59 0.15 0.96 16 16 C -0.08 0.47 3.19 -10.79 -0.03 0.43 16 17 C -0.11 0.36 5.04 30.59 0.15 0.52 16 18 C -0.09 -0.09 2.87 -10.79 -0.03 -0.12 16 19 C -0.13 -0.17 4.81 30.60 0.15 -0.03 16 20 C 0.13 0.00 1.15 -10.79 -0.01 -0.01 16 21 O -0.58 -1.47 12.98 -148.98 -1.93 -3.40 16 22 C -0.13 0.46 4.82 30.59 0.15 0.61 16 23 C -0.10 -0.02 4.84 30.60 0.15 0.13 16 24 C -0.09 0.41 9.41 22.58 0.21 0.62 16 25 C -0.12 0.52 8.65 22.22 0.19 0.71 16 26 H 0.39 -1.53 8.70 -74.05 -0.64 -2.17 16 27 H 0.12 -0.37 7.96 -2.39 -0.02 -0.39 16 28 H -0.31 -1.43 7.11 99.48 0.71 -0.73 16 29 H -0.28 0.33 7.00 99.48 0.70 1.03 16 30 H 0.13 -0.04 8.06 -2.91 -0.02 -0.06 16 31 H 0.13 -0.21 8.06 -2.91 -0.02 -0.23 16 32 H 0.12 0.47 7.52 -2.91 -0.02 0.45 16 33 H 0.17 -1.62 6.07 -2.91 -0.02 -1.64 16 34 H 0.42 -3.70 6.85 -92.71 -0.63 -4.33 16 35 H 0.06 0.42 7.58 -2.39 -0.02 0.40 16 36 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 37 H 0.08 -0.91 6.51 -2.39 -0.02 -0.93 16 38 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 39 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 40 H 0.06 -0.19 8.14 -2.39 -0.02 -0.21 16 41 H 0.07 -0.33 7.60 -2.38 -0.02 -0.35 16 42 H 0.05 0.34 8.14 -2.39 -0.02 0.32 16 43 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 44 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 45 H 0.39 -1.70 9.05 -74.06 -0.67 -2.37 16 46 H 0.07 -0.21 8.14 -2.39 -0.02 -0.22 16 47 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 48 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 49 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 50 H 0.16 -1.64 6.17 -2.91 -0.02 -1.65 16 51 H 0.15 -1.23 4.81 -2.91 -0.01 -1.25 16 Total: 0.00 -21.23 389.20 -2.04 -23.27 By element: Atomic # 1 Polarization: -15.14 SS G_CDS: -0.95 Total: -16.09 kcal Atomic # 6 Polarization: 5.88 SS G_CDS: 2.66 Total: 8.54 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -1.89 Total: -0.32 kcal Atomic # 8 Polarization: -10.53 SS G_CDS: -3.91 Total: -14.44 kcal Atomic # 14 Polarization: -3.02 SS G_CDS: 2.05 Total: -0.97 kcal Total: -21.23 -2.04 -23.27 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_12360594.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.892 kcal (2) G-P(sol) polarization free energy of solvation -21.230 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.121 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.269 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.161 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds