Wall clock time and date at job start Thu Mar 4 2021 18:01:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86308 * 109.47089 * 2 1 4 4 C 1.50701 * 109.47167 * 119.99594 * 2 1 3 5 5 C 1.38614 * 119.84009 * 75.00335 * 4 2 1 6 6 F 1.35105 * 119.91877 * 359.97438 * 5 4 2 7 7 C 1.38109 * 120.16549 * 180.02562 * 5 4 2 8 8 C 1.39613 * 119.85069 * 359.97438 * 7 5 4 9 9 C 1.47699 * 120.15382 * 179.97438 * 8 7 5 10 10 O 1.21567 * 120.00012 * 179.97438 * 9 8 7 11 11 N 1.34780 * 120.00064 * 0.02562 * 9 8 7 12 12 C 1.46500 * 119.99944 * 179.97438 * 11 9 8 13 13 C 1.52997 * 109.46927 * 155.00048 * 12 11 9 14 14 C 1.52997 * 109.47457 * 59.99484 * 13 12 11 15 15 C 1.53002 * 109.46817 * 60.00169 * 14 13 12 16 16 C 1.52996 * 109.47346 * 299.99737 * 15 14 13 17 17 C 1.53002 * 109.46891 * 59.99997 * 16 15 14 18 18 C 1.52997 * 109.46978 * 60.00410 * 17 16 15 19 19 C 1.53006 * 109.47164 * 299.99874 * 18 17 16 20 20 O 1.42895 * 109.47000 * 180.02562 * 19 18 17 21 21 C 1.52997 * 109.47127 * 59.99836 * 19 18 17 22 22 C 1.52999 * 109.46623 * 299.99900 * 19 18 17 23 23 C 1.39843 * 119.69421 * 0.25153 * 8 7 5 24 24 F 1.35093 * 120.08849 * 179.74871 * 23 8 7 25 25 C 1.38230 * 119.84683 * 254.97920 * 4 2 1 26 26 H 0.96707 * 114.00048 * 60.00602 * 1 2 3 27 27 H 1.08997 * 109.47314 * 240.00029 * 2 1 3 28 28 H 1.48500 * 109.99904 * 298.67559 * 3 2 1 29 29 H 1.48492 * 110.00025 * 59.99741 * 3 2 1 30 30 H 1.08004 * 120.07433 * 179.97438 * 7 5 4 31 31 H 0.97001 * 119.99485 * 359.97438 * 11 9 8 32 32 H 1.09000 * 109.47381 * 34.99693 * 12 11 9 33 33 H 1.09001 * 109.46989 * 299.99155 * 13 12 11 34 34 H 1.08993 * 109.47194 * 299.99651 * 14 13 12 35 35 H 1.09002 * 109.46695 * 179.97438 * 14 13 12 36 36 H 1.09004 * 109.46733 * 179.97438 * 15 14 13 37 37 H 1.08992 * 109.47554 * 180.02562 * 16 15 14 38 38 H 1.09004 * 109.47108 * 300.00289 * 16 15 14 39 39 H 1.09002 * 109.47097 * 180.02562 * 17 16 15 40 40 H 1.09001 * 109.47375 * 59.99908 * 18 17 16 41 41 H 1.09000 * 109.47140 * 179.97438 * 18 17 16 42 42 H 0.96696 * 114.00485 * 299.99339 * 20 19 18 43 43 H 1.09002 * 109.47153 * 180.02562 * 21 19 18 44 44 H 1.09001 * 109.46832 * 60.00321 * 21 19 18 45 45 H 1.09000 * 109.47486 * 299.99829 * 22 19 18 46 46 H 1.09002 * 109.46716 * 179.97438 * 22 19 18 47 47 H 1.08005 * 119.92588 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.8678 -2.0931 1.3029 6 9 1.3558 -2.7991 0.2710 7 6 2.3258 -2.7509 2.4276 8 6 2.8542 -2.0200 3.4933 9 6 3.3453 -2.7166 4.6995 10 8 3.8053 -2.0774 5.6256 11 7 3.2845 -4.0610 4.7730 12 6 3.7722 -4.7520 5.9693 13 6 3.0674 -6.1036 6.1004 14 6 3.3624 -6.9548 4.8638 15 6 4.8717 -7.1761 4.7452 16 6 5.5766 -5.8245 4.6140 17 6 5.2815 -4.9733 5.8506 18 6 5.7909 -5.6949 7.0998 19 6 5.0861 -7.0466 7.2311 20 8 5.5614 -7.7203 8.3982 21 6 5.3810 -7.8978 5.9945 22 6 3.5768 -6.8252 7.3498 23 6 2.9109 -0.6249 3.4158 24 9 3.4159 0.0906 4.4444 25 6 2.4535 0.0201 2.2815 26 1 -0.3933 0.4416 -0.7651 27 1 1.7923 -0.5138 -0.8899 28 1 1.5879 2.4586 -1.2243 29 1 1.5614 2.4679 1.2084 30 1 2.2753 -3.8284 2.4826 31 1 2.9178 -4.5710 4.0339 32 1 3.5621 -4.1455 6.8503 33 1 1.9922 -5.9459 6.1850 34 1 2.9994 -6.4407 3.9739 35 1 2.8605 -7.9179 4.9576 36 1 5.0818 -7.7829 3.8645 37 1 6.6517 -5.9822 4.5290 38 1 5.2137 -5.3104 3.7239 39 1 5.7833 -4.0102 5.7569 40 1 6.8662 -5.8525 7.0154 41 1 5.5811 -5.0883 7.9808 42 1 6.5126 -7.8940 8.3921 43 1 4.8785 -8.8606 6.0878 44 1 6.4563 -8.0554 5.9100 45 1 3.3666 -6.2188 8.2308 46 1 3.0746 -7.7881 7.4428 47 1 2.5007 1.0972 2.2181 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_12360598.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:01:30 Heat of formation + Delta-G solvation = -179.024352 kcal Electronic energy + Delta-G solvation = -34787.046839 eV Core-core repulsion = 29957.511287 eV Total energy + Delta-G solvation = -4829.535552 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.148 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -50.13230 -50.10717 -42.90167 -41.09872 -39.78455 -37.81098 -37.60523 -35.53363 -33.80921 -33.76639 -32.89193 -31.41305 -31.02597 -28.08254 -26.99472 -26.49272 -24.41939 -23.81260 -22.81459 -22.54954 -22.43815 -21.40778 -19.84534 -18.91737 -18.74855 -18.47161 -18.44849 -17.91024 -17.45838 -17.17221 -16.75520 -16.53648 -16.23627 -16.17145 -15.87754 -15.68820 -15.61357 -15.44310 -15.28844 -15.21960 -15.06001 -14.64607 -14.42240 -14.18574 -13.99182 -13.74633 -13.63699 -13.58415 -13.53367 -13.38770 -13.09361 -13.04769 -12.57168 -12.38673 -12.06661 -11.99689 -11.96627 -11.83394 -11.38692 -11.29271 -11.19181 -10.88613 -10.63956 -10.59785 -10.41183 -10.13321 -9.83398 -4.97697 -0.82900 -0.32524 1.14644 1.36211 1.54756 1.80308 1.88163 2.21123 2.73969 2.81910 3.04804 3.12970 3.30292 3.39871 3.42122 3.43390 3.63337 3.72225 3.81007 3.85981 3.95982 4.05289 4.09690 4.13243 4.17764 4.22109 4.25059 4.30073 4.32456 4.37503 4.49739 4.57631 4.60211 4.66945 4.69332 4.72226 4.77146 4.84957 4.99522 4.99974 5.02763 5.03792 5.11649 5.15507 5.24981 5.31090 5.35284 5.37185 5.46336 5.49363 6.29144 6.48630 6.84438 6.97550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.090 4.090 3 Si 0.766 3.234 4 C -0.054 4.054 5 C 0.105 3.895 6 F -0.125 7.125 7 C -0.076 4.076 8 C -0.147 4.147 9 C 0.559 3.441 10 O -0.559 6.559 11 N -0.698 5.698 12 C 0.158 3.842 13 C -0.083 4.083 14 C -0.113 4.113 15 C -0.082 4.082 16 C -0.106 4.106 17 C -0.090 4.090 18 C -0.134 4.134 19 C 0.134 3.866 20 O -0.579 6.579 21 C -0.134 4.134 22 C -0.099 4.099 23 C 0.139 3.861 24 F -0.124 7.124 25 C -0.131 4.131 26 H 0.402 0.598 27 H 0.106 0.894 28 H -0.275 1.275 29 H -0.290 1.290 30 H 0.183 0.817 31 H 0.414 0.586 32 H 0.067 0.933 33 H 0.093 0.907 34 H 0.082 0.918 35 H 0.081 0.919 36 H 0.091 0.909 37 H 0.067 0.933 38 H 0.072 0.928 39 H 0.057 0.943 40 H 0.077 0.923 41 H 0.055 0.945 42 H 0.390 0.610 43 H 0.071 0.929 44 H 0.072 0.928 45 H 0.058 0.942 46 H 0.079 0.921 47 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.437 -3.709 -7.332 8.341 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.198 4.198 3 Si 0.670 3.330 4 C -0.056 4.056 5 C 0.086 3.914 6 F -0.103 7.103 7 C -0.095 4.095 8 C -0.151 4.151 9 C 0.346 3.654 10 O -0.438 6.438 11 N -0.351 5.351 12 C 0.053 3.947 13 C -0.102 4.102 14 C -0.150 4.150 15 C -0.100 4.100 16 C -0.144 4.144 17 C -0.110 4.110 18 C -0.172 4.172 19 C 0.094 3.906 20 O -0.388 6.388 21 C -0.171 4.171 22 C -0.137 4.137 23 C 0.118 3.882 24 F -0.103 7.103 25 C -0.150 4.150 26 H 0.253 0.747 27 H 0.124 0.876 28 H -0.201 1.201 29 H -0.217 1.217 30 H 0.200 0.800 31 H 0.253 0.747 32 H 0.085 0.915 33 H 0.111 0.889 34 H 0.100 0.900 35 H 0.099 0.901 36 H 0.109 0.891 37 H 0.086 0.914 38 H 0.091 0.909 39 H 0.076 0.924 40 H 0.095 0.905 41 H 0.074 0.926 42 H 0.239 0.761 43 H 0.090 0.910 44 H 0.090 0.910 45 H 0.077 0.923 46 H 0.097 0.903 47 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 1.009 -2.734 -5.972 6.645 hybrid contribution -0.625 0.023 -0.491 0.795 sum 0.384 -2.711 -6.463 7.019 Atomic orbital electron populations 1.86536 1.17423 1.80962 1.51432 1.24970 0.85058 1.12516 0.97283 0.93963 0.90165 0.71529 0.77391 1.19496 0.97931 0.92147 0.96012 1.17297 0.99083 0.88867 0.86177 1.91565 1.84413 1.78064 1.56253 1.21329 0.95948 1.02346 0.89875 1.19815 1.06411 0.92207 0.96663 1.18043 0.78386 0.82995 0.85950 1.90871 1.46537 1.66855 1.39574 1.45821 1.63098 1.05136 1.21024 1.20942 0.93498 0.92950 0.87260 1.21281 1.00437 0.92673 0.95824 1.21672 0.95896 1.00631 0.96839 1.21063 0.94984 0.95943 0.98009 1.21555 1.00921 0.95192 0.96714 1.21309 0.94951 0.98721 0.95969 1.22141 1.00835 0.96640 0.97574 1.21131 0.94105 0.90391 0.84988 1.86521 1.29926 1.79924 1.42388 1.22168 1.01962 0.98847 0.94152 1.21391 0.93605 1.01275 0.97442 1.17756 0.96404 0.88534 0.85477 1.91597 1.84080 1.77626 1.56955 1.21044 1.00610 1.02150 0.91155 0.74682 0.87605 1.20147 1.21738 0.80010 0.74671 0.91500 0.88871 0.89978 0.90051 0.89091 0.91383 0.90909 0.92422 0.90473 0.92625 0.76083 0.91046 0.90950 0.92323 0.90286 0.81714 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.31 12.86 -148.98 -1.92 -1.60 16 2 C -0.09 0.31 2.43 71.24 0.17 0.48 16 3 Si 0.77 -3.62 30.18 68.60 2.07 -1.55 16 4 C -0.05 0.04 5.30 -19.78 -0.10 -0.07 16 5 C 0.11 -0.13 7.23 22.33 0.16 0.03 16 6 F -0.12 0.00 16.73 44.97 0.75 0.75 16 7 C -0.08 0.28 9.52 22.57 0.21 0.50 16 8 C -0.15 -0.29 5.88 -20.06 -0.12 -0.40 16 9 C 0.56 2.86 7.73 86.74 0.67 3.53 16 10 O -0.56 -8.07 15.00 -3.93 -0.06 -8.13 16 11 N -0.70 1.32 4.18 -445.55 -1.86 -0.55 16 12 C 0.16 0.02 2.05 44.99 0.09 0.11 16 13 C -0.08 0.31 2.88 -10.79 -0.03 0.28 16 14 C -0.11 0.86 5.02 30.59 0.15 1.01 16 15 C -0.08 0.52 3.19 -10.79 -0.03 0.48 16 16 C -0.11 0.46 5.04 30.59 0.15 0.62 16 17 C -0.09 -0.01 2.87 -10.79 -0.03 -0.04 16 18 C -0.13 -0.06 4.81 30.60 0.15 0.09 16 19 C 0.13 -0.08 1.15 -10.79 -0.01 -0.09 16 20 O -0.58 -1.17 12.98 -148.98 -1.93 -3.11 16 21 C -0.13 0.54 4.82 30.59 0.15 0.69 16 22 C -0.10 0.03 4.84 30.60 0.15 0.17 16 23 C 0.14 0.66 7.28 22.67 0.17 0.82 16 24 F -0.12 -1.32 15.55 44.97 0.70 -0.62 16 25 C -0.13 -0.08 8.62 22.28 0.19 0.11 16 26 H 0.40 -3.48 8.74 -74.05 -0.65 -4.13 16 27 H 0.11 -0.77 7.89 -2.39 -0.02 -0.79 16 28 H -0.28 0.27 7.11 99.48 0.71 0.98 16 29 H -0.29 -0.59 6.74 99.48 0.67 0.08 16 30 H 0.18 -2.02 6.40 -2.91 -0.02 -2.04 16 31 H 0.41 -3.47 4.90 -92.71 -0.45 -3.93 16 32 H 0.07 0.40 7.58 -2.39 -0.02 0.39 16 33 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 34 H 0.08 -0.92 6.50 -2.39 -0.02 -0.94 16 35 H 0.08 -0.65 8.14 -2.39 -0.02 -0.67 16 36 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 37 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 38 H 0.07 -0.41 7.60 -2.38 -0.02 -0.43 16 39 H 0.06 0.29 8.14 -2.39 -0.02 0.27 16 40 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 41 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 42 H 0.39 -1.91 9.05 -74.06 -0.67 -2.58 16 43 H 0.07 -0.24 8.14 -2.39 -0.02 -0.25 16 44 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 45 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 46 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 47 H 0.17 -0.27 4.87 -2.91 -0.01 -0.29 16 Total: 0.00 -21.68 365.11 -0.87 -22.55 By element: Atomic # 1 Polarization: -15.35 SS G_CDS: -0.71 Total: -16.06 kcal Atomic # 6 Polarization: 6.23 SS G_CDS: 2.09 Total: 8.32 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -1.86 Total: -0.55 kcal Atomic # 8 Polarization: -8.94 SS G_CDS: -3.91 Total: -12.85 kcal Atomic # 9 Polarization: -1.32 SS G_CDS: 1.45 Total: 0.13 kcal Atomic # 14 Polarization: -3.62 SS G_CDS: 2.07 Total: -1.55 kcal Total: -21.68 -0.87 -22.55 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_12360598.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -156.471 kcal (2) G-P(sol) polarization free energy of solvation -21.682 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.153 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.872 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.553 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.024 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds