Wall clock time and date at job start Thu Mar 4 2021 18:01:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.47043 * 2 1 4 4 C 1.50702 * 109.46971 * 120.00010 * 2 1 3 5 5 C 1.37819 * 119.94130 * 15.32521 * 4 2 1 6 6 C 1.39659 * 119.87882 * 180.29424 * 5 4 2 7 7 C 1.47722 * 120.11882 * 179.67252 * 6 5 4 8 8 O 1.21566 * 120.00242 * 359.73075 * 7 6 5 9 9 N 1.34778 * 120.00180 * 179.72768 * 7 6 5 10 10 C 1.46499 * 120.00288 * 180.02562 * 9 7 6 11 11 C 1.52997 * 109.47012 * 274.99862 * 10 9 7 12 12 C 1.52999 * 109.47592 * 300.00038 * 11 10 9 13 13 C 1.53006 * 109.46626 * 300.00035 * 12 11 10 14 14 C 1.52997 * 109.47164 * 59.99702 * 13 12 11 15 15 C 1.52996 * 109.47369 * 154.99725 * 10 9 7 16 16 C 1.52997 * 109.47131 * 179.97438 * 15 10 9 17 17 C 1.52997 * 109.47232 * 300.00126 * 16 15 10 18 18 O 1.42911 * 109.47126 * 180.02562 * 17 16 15 19 19 C 1.52997 * 109.47127 * 299.99539 * 13 12 11 20 20 C 1.52996 * 109.47165 * 59.99895 * 17 16 15 21 21 C 1.39634 * 119.76231 * 359.40239 * 6 5 4 22 22 C 1.37849 * 119.88204 * 0.27591 * 21 6 5 23 23 C 1.38634 * 120.11929 * 0.02562 * 22 21 6 24 24 F 1.35096 * 119.88324 * 179.97438 * 23 22 21 25 25 H 0.96694 * 113.99853 * 300.00196 * 1 2 3 26 26 H 1.09001 * 109.47068 * 240.00122 * 2 1 3 27 27 H 1.48494 * 110.00291 * 299.99704 * 3 2 1 28 28 H 1.48500 * 109.99955 * 61.32338 * 3 2 1 29 29 H 1.07999 * 120.05666 * 359.97438 * 5 4 2 30 30 H 0.97007 * 119.99934 * 0.02562 * 9 7 6 31 31 H 1.09001 * 109.46813 * 34.99915 * 10 9 7 32 32 H 1.09002 * 109.47045 * 59.99785 * 11 10 9 33 33 H 1.08993 * 109.47839 * 180.02562 * 12 11 10 34 34 H 1.09000 * 109.47160 * 59.99666 * 12 11 10 35 35 H 1.09001 * 109.46998 * 179.97438 * 13 12 11 36 36 H 1.09000 * 109.47140 * 60.00051 * 14 13 12 37 37 H 1.09001 * 109.47230 * 179.97438 * 14 13 12 38 38 H 1.08992 * 109.47534 * 300.00357 * 15 10 9 39 39 H 1.08998 * 109.47533 * 60.00505 * 16 15 10 40 40 H 1.09002 * 109.47153 * 180.02562 * 16 15 10 41 41 H 0.96699 * 113.99606 * 59.99878 * 18 17 16 42 42 H 1.09002 * 109.47153 * 180.02562 * 19 13 12 43 43 H 1.08996 * 109.46952 * 300.00302 * 19 13 12 44 44 H 1.09000 * 109.47380 * 179.97438 * 20 17 16 45 45 H 1.09001 * 109.46993 * 60.00298 * 20 17 16 46 46 H 1.08008 * 120.05987 * 180.29067 * 21 6 5 47 47 H 1.08001 * 119.94384 * 180.02562 * 22 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.0747 -1.5000 1.9668 6 6 1.5400 -2.1528 3.1103 7 6 0.6246 -2.9947 3.9075 8 8 -0.5373 -3.1162 3.5713 9 7 1.0775 -3.6280 5.0076 10 6 0.1698 -4.4633 5.7979 11 6 -0.5915 -3.5873 6.7948 12 6 0.4033 -2.8922 7.7266 13 6 1.2115 -3.9458 8.4869 14 6 1.9727 -4.8218 7.4900 15 6 0.9779 -5.5168 6.5581 16 6 0.0300 -6.3887 7.3840 17 6 -0.7308 -5.5122 8.3809 18 8 -1.6159 -6.3268 9.1527 19 6 0.2634 -4.8181 9.3122 20 6 -1.5390 -4.4588 7.6207 21 6 2.8751 -2.0116 3.4943 22 6 3.7251 -1.2247 2.7469 23 6 3.2564 -0.5738 1.6161 24 9 4.0935 0.1965 0.8874 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8900 27 1 1.5616 2.4679 -1.2085 28 1 1.5880 2.4585 1.2243 29 1 0.0442 -1.6095 1.6629 30 1 2.0046 -3.5308 5.2762 31 1 -0.5389 -4.9584 5.1341 32 1 -1.1672 -2.8367 6.2532 33 1 -0.1390 -2.2685 8.4371 34 1 1.0787 -2.2708 7.1386 35 1 1.9205 -3.4507 9.1504 36 1 2.6482 -4.2004 6.9020 37 1 2.5488 -5.5721 8.0316 38 1 1.5203 -6.1409 5.8480 39 1 -0.6791 -6.8838 6.7205 40 1 0.6058 -7.1389 7.9259 41 1 -1.1707 -7.0178 9.6619 42 1 0.8392 -5.5683 9.8542 43 1 -0.2789 -4.1939 10.0224 44 1 -2.0814 -3.8346 8.3308 45 1 -2.2481 -4.9539 6.9572 46 1 3.2412 -2.5181 4.3752 47 1 4.7580 -1.1151 3.0427 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_12496548.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:01:38 Heat of formation + Delta-G solvation = -141.253008 kcal Electronic energy + Delta-G solvation = -32037.065991 eV Core-core repulsion = 27678.622303 eV Total energy + Delta-G solvation = -4358.443688 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.157 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -50.27660 -42.90067 -41.19261 -39.67620 -37.85639 -37.60838 -35.49613 -33.77921 -33.41320 -32.68396 -32.02652 -30.85144 -27.38445 -27.00153 -26.68931 -24.75313 -23.28379 -22.86576 -22.56666 -22.25917 -21.22452 -19.59603 -18.79954 -18.57526 -18.14093 -17.89025 -17.63718 -17.05617 -16.76059 -16.24461 -16.21319 -15.90228 -15.84910 -15.46243 -15.38752 -15.25554 -15.14697 -14.88760 -14.50875 -14.39780 -14.30618 -14.23693 -13.95108 -13.59408 -13.52679 -13.40351 -13.31300 -13.04347 -12.87172 -12.53288 -12.48038 -12.07576 -11.97941 -11.96580 -11.78754 -11.53523 -11.29343 -11.20344 -11.00610 -10.77504 -10.46642 -10.17832 -10.01985 -9.74156 -4.85690 -0.50215 0.01534 1.15657 1.49455 1.60330 1.84970 1.97063 2.57847 2.95111 3.12778 3.15735 3.31723 3.37256 3.43273 3.59419 3.66766 3.78582 3.88325 3.95866 3.98478 4.07457 4.10720 4.11456 4.15792 4.21730 4.25465 4.37486 4.40622 4.51848 4.59554 4.61127 4.69424 4.76505 4.79828 4.83774 4.89189 4.97579 4.98678 5.00153 5.02131 5.04792 5.09120 5.12039 5.15358 5.29199 5.32584 5.36293 5.47604 5.48968 5.62193 6.30873 6.41313 6.87007 7.08960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.081 4.081 3 Si 0.747 3.253 4 C -0.163 4.163 5 C -0.040 4.040 6 C -0.153 4.153 7 C 0.558 3.442 8 O -0.579 6.579 9 N -0.700 5.700 10 C 0.158 3.842 11 C -0.088 4.088 12 C -0.108 4.108 13 C -0.081 4.081 14 C -0.110 4.110 15 C -0.084 4.084 16 C -0.133 4.133 17 C 0.134 3.866 18 O -0.582 6.582 19 C -0.134 4.134 20 C -0.101 4.101 21 C -0.046 4.046 22 C -0.140 4.140 23 C 0.119 3.881 24 F -0.100 7.100 25 H 0.386 0.614 26 H 0.133 0.867 27 H -0.291 1.291 28 H -0.285 1.285 29 H 0.132 0.868 30 H 0.415 0.585 31 H 0.063 0.937 32 H 0.055 0.945 33 H 0.059 0.941 34 H 0.075 0.925 35 H 0.091 0.909 36 H 0.083 0.917 37 H 0.087 0.913 38 H 0.093 0.907 39 H 0.059 0.941 40 H 0.092 0.908 41 H 0.391 0.609 42 H 0.083 0.917 43 H 0.059 0.941 44 H 0.062 0.938 45 H 0.051 0.949 46 H 0.174 0.826 47 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.559 -1.649 5.164 11.869 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.189 4.189 3 Si 0.651 3.349 4 C -0.164 4.164 5 C -0.059 4.059 6 C -0.156 4.156 7 C 0.346 3.654 8 O -0.459 6.459 9 N -0.352 5.352 10 C 0.054 3.946 11 C -0.107 4.107 12 C -0.145 4.145 13 C -0.100 4.100 14 C -0.147 4.147 15 C -0.103 4.103 16 C -0.171 4.171 17 C 0.094 3.906 18 O -0.391 6.391 19 C -0.172 4.172 20 C -0.139 4.139 21 C -0.065 4.065 22 C -0.158 4.158 23 C 0.099 3.901 24 F -0.078 7.078 25 H 0.236 0.764 26 H 0.151 0.849 27 H -0.218 1.218 28 H -0.211 1.211 29 H 0.150 0.850 30 H 0.255 0.745 31 H 0.081 0.919 32 H 0.073 0.927 33 H 0.078 0.922 34 H 0.094 0.906 35 H 0.110 0.890 36 H 0.102 0.898 37 H 0.105 0.895 38 H 0.112 0.888 39 H 0.077 0.923 40 H 0.110 0.890 41 H 0.241 0.759 42 H 0.101 0.899 43 H 0.078 0.922 44 H 0.081 0.919 45 H 0.070 0.930 46 H 0.191 0.809 47 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges 9.217 -0.819 4.110 10.125 hybrid contribution -1.152 -0.274 0.399 1.249 sum 8.065 -1.093 4.509 9.305 Atomic orbital electron populations 1.86573 1.18023 1.80460 1.50292 1.25089 0.83928 1.11598 0.98297 0.94124 0.91491 0.71833 0.77485 1.20306 0.93667 1.02391 1.00086 1.20859 1.00358 0.92402 0.92291 1.19949 0.95402 1.02403 0.97862 1.18449 0.86917 0.79338 0.80663 1.90804 1.19899 1.64187 1.71049 1.45818 1.14866 1.48713 1.25823 1.20884 0.91635 0.90740 0.91376 1.21291 0.96452 0.97089 0.95903 1.21567 0.97584 0.97587 0.97802 1.21065 0.96696 0.95428 0.96781 1.21655 0.96734 0.99391 0.96911 1.21275 0.96310 0.95402 0.97335 1.22144 0.98537 0.98138 0.98304 1.21093 0.89007 0.89994 0.90518 1.86540 1.38375 1.49641 1.64500 1.22159 0.97341 0.99970 0.97728 1.21378 0.97554 0.96714 0.98264 1.21518 0.90226 0.95381 0.99346 1.21465 1.03242 0.97633 0.93460 1.17803 0.86739 0.93374 0.92137 1.91198 1.69426 1.71160 1.76055 0.76402 0.84917 1.21822 1.21081 0.85025 0.74529 0.91886 0.92692 0.92191 0.90633 0.89033 0.89849 0.89484 0.88832 0.92267 0.88975 0.75886 0.89888 0.92179 0.91911 0.92972 0.80870 0.80034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.76 11.64 -148.98 -1.73 -4.49 16 2 C -0.08 -0.13 2.96 71.24 0.21 0.09 16 3 Si 0.75 0.87 29.57 68.60 2.03 2.89 16 4 C -0.16 -0.10 5.13 -19.86 -0.10 -0.20 16 5 C -0.04 -0.13 8.78 22.51 0.20 0.07 16 6 C -0.15 -0.01 5.87 -20.09 -0.12 -0.12 16 7 C 0.56 2.21 7.73 86.75 0.67 2.88 16 8 O -0.58 -8.03 16.01 -3.92 -0.06 -8.09 16 9 N -0.70 2.20 4.18 -445.53 -1.86 0.33 16 10 C 0.16 -0.08 2.05 44.99 0.09 0.02 16 11 C -0.09 -0.11 2.87 -10.81 -0.03 -0.14 16 12 C -0.11 0.38 5.03 30.60 0.15 0.53 16 13 C -0.08 0.57 3.19 -10.79 -0.03 0.54 16 14 C -0.11 1.09 5.02 30.59 0.15 1.25 16 15 C -0.08 0.50 2.88 -10.79 -0.03 0.47 16 16 C -0.13 0.49 4.81 30.59 0.15 0.64 16 17 C 0.13 -0.10 1.15 -10.83 -0.01 -0.11 16 18 O -0.58 -1.14 12.98 -148.98 -1.93 -3.08 16 19 C -0.13 0.59 4.81 30.56 0.15 0.74 16 20 C -0.10 -0.36 4.84 30.58 0.15 -0.21 16 21 C -0.05 0.36 9.54 22.51 0.21 0.58 16 22 C -0.14 1.12 10.01 22.27 0.22 1.34 16 23 C 0.12 -0.38 6.67 22.47 0.15 -0.23 16 24 F -0.10 0.42 13.70 44.97 0.62 1.04 16 25 H 0.39 -0.01 8.44 -74.06 -0.63 -0.63 16 26 H 0.13 -0.02 7.96 -2.39 -0.02 -0.04 16 27 H -0.29 -2.30 7.11 99.48 0.71 -1.59 16 28 H -0.28 -1.63 7.11 99.48 0.71 -0.92 16 29 H 0.13 0.93 6.67 -2.91 -0.02 0.91 16 30 H 0.41 -4.31 4.89 -92.70 -0.45 -4.76 16 31 H 0.06 0.37 7.58 -2.39 -0.02 0.35 16 32 H 0.05 0.37 8.14 -2.39 -0.02 0.35 16 33 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.08 -0.41 7.60 -2.39 -0.02 -0.43 16 35 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 36 H 0.08 -1.14 6.51 -2.39 -0.02 -1.16 16 37 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 38 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 39 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 40 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 41 H 0.39 -2.40 9.04 -74.06 -0.67 -3.07 16 42 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 43 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 44 H 0.06 0.33 8.14 -2.39 -0.02 0.31 16 45 H 0.05 0.37 8.14 -2.39 -0.02 0.35 16 46 H 0.17 -2.74 6.40 -2.91 -0.02 -2.75 16 47 H 0.18 -2.59 8.06 -2.91 -0.02 -2.62 16 Total: 0.00 -21.72 358.37 -1.45 -23.16 By element: Atomic # 1 Polarization: -19.18 SS G_CDS: -0.68 Total: -19.86 kcal Atomic # 6 Polarization: 5.92 SS G_CDS: 2.18 Total: 8.10 kcal Atomic # 7 Polarization: 2.20 SS G_CDS: -1.86 Total: 0.33 kcal Atomic # 8 Polarization: -11.94 SS G_CDS: -3.73 Total: -15.67 kcal Atomic # 9 Polarization: 0.42 SS G_CDS: 0.62 Total: 1.04 kcal Atomic # 14 Polarization: 0.87 SS G_CDS: 2.03 Total: 2.89 kcal Total: -21.72 -1.45 -23.16 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_12496548.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.089 kcal (2) G-P(sol) polarization free energy of solvation -21.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.164 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.253 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds