Wall clock time and date at job start Thu Mar 4 2021 18:02:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86301 * 109.46823 * 2 1 4 4 C 1.50691 * 109.47384 * 239.99640 * 2 1 3 5 5 C 1.38903 * 119.67631 * 119.97756 * 4 2 1 6 6 C 1.36478 * 120.61804 * 179.97438 * 5 4 2 7 7 C 1.40064 * 119.82590 * 0.10272 * 6 5 4 8 8 C 1.41595 * 133.37926 * 179.97438 * 7 6 5 9 9 C 1.35860 * 107.72914 * 179.97438 * 8 7 6 10 10 C 1.47062 * 125.42965 * 179.97438 * 9 8 7 11 11 O 1.21643 * 119.99738 * 0.02562 * 10 9 8 12 12 N 1.34773 * 120.00094 * 180.02562 * 10 9 8 13 13 C 1.46499 * 120.00031 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47695 * 204.99801 * 13 12 10 15 15 C 1.52997 * 109.47457 * 179.97438 * 14 13 12 16 16 C 1.53002 * 109.46817 * 60.00169 * 15 14 13 17 17 C 1.52996 * 109.47346 * 299.99737 * 16 15 14 18 18 C 1.53002 * 109.46891 * 59.99997 * 17 16 15 19 19 C 1.52997 * 109.46978 * 60.00410 * 18 17 16 20 20 C 1.53006 * 109.47164 * 299.99874 * 19 18 17 21 21 O 1.42895 * 109.47000 * 180.02562 * 20 19 18 22 22 C 1.52997 * 109.47127 * 59.99836 * 20 19 18 23 23 C 1.52999 * 109.46623 * 299.99900 * 20 19 18 24 24 N 1.38149 * 109.14698 * 0.24618 * 9 8 7 25 25 C 1.37487 * 108.79025 * 359.59603 * 24 9 8 26 26 C 1.37709 * 119.67715 * 299.99755 * 4 2 1 27 27 H 0.96695 * 114.00384 * 300.00435 * 1 2 3 28 28 H 1.08996 * 109.46719 * 119.99383 * 2 1 3 29 29 H 1.48509 * 109.99951 * 299.99618 * 3 2 1 30 30 H 1.48500 * 110.00548 * 61.31295 * 3 2 1 31 31 H 1.07998 * 119.68788 * 0.02562 * 5 4 2 32 32 H 1.07997 * 120.08516 * 180.02562 * 6 5 4 33 33 H 1.08001 * 126.13736 * 359.97438 * 8 7 6 34 34 H 0.96998 * 120.00452 * 359.97438 * 12 10 9 35 35 H 1.09004 * 109.47041 * 324.99924 * 13 12 10 36 36 H 1.09001 * 109.46989 * 59.99548 * 14 13 12 37 37 H 1.08993 * 109.47194 * 299.99651 * 15 14 13 38 38 H 1.09002 * 109.46695 * 179.97438 * 15 14 13 39 39 H 1.09004 * 109.46733 * 179.97438 * 16 15 14 40 40 H 1.08992 * 109.47554 * 180.02562 * 17 16 15 41 41 H 1.09004 * 109.47108 * 300.00289 * 17 16 15 42 42 H 1.09002 * 109.47097 * 180.02562 * 18 17 16 43 43 H 1.09001 * 109.47375 * 59.99908 * 19 18 17 44 44 H 1.09000 * 109.47140 * 179.97438 * 19 18 17 45 45 H 0.96696 * 114.00485 * 299.99339 * 21 20 19 46 46 H 1.09002 * 109.47153 * 180.02562 * 22 20 19 47 47 H 1.09001 * 109.46832 * 60.00321 * 22 20 19 48 48 H 1.09000 * 109.47486 * 299.99829 * 23 20 19 49 49 H 1.09002 * 109.46716 * 179.97438 * 23 20 19 50 50 H 0.97002 * 125.60917 * 179.75741 * 24 9 8 51 51 H 1.08002 * 120.09437 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 2.7292 -0.0288 -2.1405 6 6 3.1951 -0.6536 -3.2608 7 6 2.8657 -1.9940 -3.4989 8 6 3.1804 -2.9030 -4.5380 9 6 2.5823 -4.0875 -4.2466 10 6 2.6548 -5.3043 -5.0694 11 8 3.2912 -5.3004 -6.1061 12 7 2.0161 -6.4236 -4.6749 13 6 2.0878 -7.6355 -5.4949 14 6 0.8629 -8.5102 -5.2206 15 6 0.9376 -9.7755 -6.0774 16 6 2.2081 -10.5534 -5.7285 17 6 3.4331 -9.6788 -6.0028 18 6 3.3583 -8.4134 -5.1460 19 6 3.3292 -8.8005 -3.6661 20 6 2.1041 -9.6752 -3.3918 21 8 2.0766 -10.0363 -2.0095 22 6 2.1788 -10.9406 -4.2486 23 6 0.8337 -8.8973 -3.7407 24 7 1.8901 -3.9652 -3.0573 25 6 2.0558 -2.6873 -2.5779 26 6 1.5948 -2.0289 -1.4415 27 1 -0.3934 0.4417 0.7650 28 1 1.7923 -0.5137 0.8900 29 1 1.5615 2.4679 -1.2086 30 1 1.5878 2.4587 1.2241 31 1 2.9838 1.0050 -1.9594 32 1 3.8151 -0.1155 -3.9625 33 1 3.7870 -2.6924 -5.4064 34 1 1.5089 -6.4268 -3.8481 35 1 2.1089 -7.3600 -6.5493 36 1 -0.0422 -7.9562 -5.4695 37 1 0.9583 -9.4998 -7.1317 38 1 0.0650 -10.3988 -5.8816 39 1 2.2610 -11.4551 -6.3387 40 1 4.3382 -10.2331 -5.7547 41 1 3.4539 -9.4030 -7.0572 42 1 4.2309 -7.7900 -5.3418 43 1 4.2343 -9.3547 -3.4176 44 1 3.2764 -7.8990 -3.0557 45 1 2.8530 -10.5330 -1.7171 46 1 1.3059 -11.5635 -4.0535 47 1 3.0839 -11.4947 -4.0001 48 1 0.7805 -7.9958 -3.1303 49 1 -0.0390 -9.5206 -3.5457 50 1 1.3741 -4.6664 -2.6295 51 1 0.9740 -2.5503 -0.7280 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15142604_13158378.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:02:12 Heat of formation + Delta-G solvation = -63.511332 kcal Electronic energy + Delta-G solvation = -34315.878513 eV Core-core repulsion = 29952.844121 eV Total energy + Delta-G solvation = -4363.034392 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.177 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -43.04462 -42.51330 -40.23846 -38.84905 -37.57748 -37.06294 -35.85877 -33.88272 -33.30897 -32.62745 -31.80280 -30.91378 -30.37658 -27.51178 -27.12559 -26.24696 -24.31034 -23.30507 -22.92531 -22.45547 -22.21409 -21.81378 -20.92782 -19.77073 -18.76033 -18.53616 -18.07444 -17.92261 -17.18778 -16.78052 -16.47368 -16.34956 -16.01637 -15.87784 -15.54467 -15.52209 -15.18026 -15.03564 -15.00943 -14.85660 -14.64989 -14.54601 -14.33910 -14.20838 -13.87134 -13.81561 -13.65273 -13.47179 -13.43656 -13.18653 -12.68494 -12.32341 -12.25842 -12.17038 -12.10195 -12.07950 -12.01961 -11.72024 -11.64657 -11.38067 -11.18453 -10.91764 -10.89232 -10.57028 -10.48135 -10.14148 -9.26468 -8.76578 -4.93992 -0.28483 0.57698 1.04447 1.29036 1.61354 1.80052 1.94310 1.99048 2.30204 2.77843 2.94638 3.28858 3.31760 3.33331 3.56585 3.64658 3.67145 3.77318 3.84600 3.86241 3.95933 4.00862 4.04440 4.06318 4.09226 4.13313 4.17968 4.22517 4.34474 4.41322 4.43561 4.49137 4.52267 4.54684 4.60406 4.63612 4.81525 4.81796 4.85554 4.89123 4.91133 4.94591 4.97272 5.00791 5.02826 5.12040 5.20376 5.25966 5.31013 5.35914 5.42459 5.44788 5.59534 5.66070 6.01246 6.22727 6.37994 6.41915 6.60088 7.02628 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.076 4.076 3 Si 0.687 3.313 4 C -0.042 4.042 5 C -0.143 4.143 6 C -0.051 4.051 7 C -0.117 4.117 8 C -0.099 4.099 9 C 0.012 3.988 10 C 0.586 3.414 11 O -0.517 6.517 12 N -0.723 5.723 13 C 0.156 3.844 14 C -0.092 4.092 15 C -0.108 4.108 16 C -0.086 4.086 17 C -0.109 4.109 18 C -0.094 4.094 19 C -0.136 4.136 20 C 0.135 3.865 21 O -0.561 6.561 22 C -0.137 4.137 23 C -0.099 4.099 24 N -0.579 5.579 25 C 0.116 3.884 26 C -0.103 4.103 27 H 0.380 0.620 28 H 0.077 0.923 29 H -0.254 1.254 30 H -0.263 1.263 31 H 0.130 0.870 32 H 0.133 0.867 33 H 0.158 0.842 34 H 0.395 0.605 35 H 0.097 0.903 36 H 0.085 0.915 37 H 0.072 0.928 38 H 0.073 0.927 39 H 0.079 0.921 40 H 0.069 0.931 41 H 0.071 0.929 42 H 0.082 0.918 43 H 0.067 0.933 44 H 0.067 0.933 45 H 0.378 0.622 46 H 0.072 0.928 47 H 0.066 0.934 48 H 0.063 0.937 49 H 0.077 0.923 50 H 0.416 0.584 51 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.987 -2.163 2.689 3.589 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.186 4.186 3 Si 0.588 3.412 4 C -0.043 4.043 5 C -0.161 4.161 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.126 4.126 9 C -0.097 4.097 10 C 0.373 3.627 11 O -0.392 6.392 12 N -0.374 5.374 13 C 0.052 3.948 14 C -0.111 4.111 15 C -0.146 4.146 16 C -0.105 4.105 17 C -0.147 4.147 18 C -0.113 4.113 19 C -0.174 4.174 20 C 0.095 3.905 21 O -0.367 6.367 22 C -0.175 4.175 23 C -0.137 4.137 24 N -0.183 5.183 25 C 0.006 3.994 26 C -0.124 4.124 27 H 0.228 0.772 28 H 0.095 0.905 29 H -0.178 1.178 30 H -0.188 1.188 31 H 0.147 0.853 32 H 0.151 0.849 33 H 0.176 0.824 34 H 0.230 0.770 35 H 0.115 0.885 36 H 0.104 0.896 37 H 0.091 0.909 38 H 0.091 0.909 39 H 0.097 0.903 40 H 0.088 0.912 41 H 0.089 0.911 42 H 0.100 0.900 43 H 0.086 0.914 44 H 0.086 0.914 45 H 0.225 0.775 46 H 0.091 0.909 47 H 0.085 0.915 48 H 0.082 0.918 49 H 0.096 0.904 50 H 0.254 0.746 51 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 0.688 -1.488 1.340 2.118 hybrid contribution -1.111 -0.873 1.323 1.936 sum -0.423 -2.361 2.663 3.584 Atomic orbital electron populations 1.86594 1.17786 1.80211 1.49796 1.24823 0.84481 1.11164 0.98126 0.94916 0.91736 0.74360 0.80219 1.18922 0.97382 0.92879 0.95147 1.20414 1.00905 0.99723 0.95099 1.20346 0.97930 0.92052 0.96587 1.18217 1.02762 0.94891 0.96261 1.20962 1.01661 0.90314 0.99649 1.20101 1.03347 0.96606 0.89670 1.17196 0.79357 0.81514 0.84681 1.90873 1.41267 1.83697 1.23336 1.46025 1.53350 1.11392 1.26679 1.21021 0.94615 0.83001 0.96149 1.21359 0.97860 0.96705 0.95135 1.21555 0.98102 0.95315 0.99638 1.21079 0.94952 0.98631 0.95827 1.21563 0.97977 0.95159 1.00016 1.21410 0.98384 0.96820 0.94719 1.22176 0.98205 1.00373 0.96607 1.21072 0.94926 0.93440 0.81096 1.86538 1.47666 1.77404 1.25121 1.22201 1.02757 0.97363 0.95176 1.21427 0.97245 0.99895 0.95097 1.41888 1.45112 1.11249 1.20098 1.18277 1.00019 0.84656 0.96416 1.19828 1.02230 0.94300 0.96016 0.77232 0.90499 1.17841 1.18800 0.85281 0.84895 0.82396 0.77008 0.88513 0.89621 0.90937 0.90875 0.90279 0.91249 0.91070 0.90011 0.91395 0.91389 0.77472 0.90944 0.91489 0.91834 0.90422 0.74586 0.85688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.56 12.73 -35.23 -0.45 -1.00 16 2 C -0.08 0.01 2.80 36.00 0.10 0.11 16 3 Si 0.69 -0.64 29.75 -169.99 -5.06 -5.70 16 4 C -0.04 -0.06 5.43 -104.57 -0.57 -0.62 16 5 C -0.14 -0.11 8.59 -39.97 -0.34 -0.45 16 6 C -0.05 -0.05 10.06 -39.53 -0.40 -0.45 16 7 C -0.12 -0.27 6.16 -106.93 -0.66 -0.93 16 8 C -0.10 -0.24 10.53 -39.15 -0.41 -0.65 16 9 C 0.01 0.02 6.97 -82.29 -0.57 -0.55 16 10 C 0.59 1.30 7.76 -12.68 -0.10 1.20 16 11 O -0.52 -2.86 16.50 5.24 0.09 -2.77 16 12 N -0.72 0.43 4.23 -55.00 -0.23 0.19 16 13 C 0.16 -0.09 2.05 -67.93 -0.14 -0.23 16 14 C -0.09 0.17 2.88 -90.62 -0.26 -0.09 16 15 C -0.11 0.23 5.19 -26.73 -0.14 0.09 16 16 C -0.09 0.16 3.19 -90.62 -0.29 -0.12 16 17 C -0.11 0.15 5.19 -26.73 -0.14 0.01 16 18 C -0.09 0.05 2.88 -90.62 -0.26 -0.21 16 19 C -0.14 0.13 4.66 -26.73 -0.12 0.01 16 20 C 0.14 -0.15 1.15 -90.62 -0.10 -0.25 16 21 O -0.56 0.03 12.98 -35.23 -0.46 -0.43 16 22 C -0.14 0.22 4.82 -26.73 -0.13 0.09 16 23 C -0.10 0.14 4.67 -26.73 -0.12 0.01 16 24 N -0.58 -0.09 6.07 -7.35 -0.04 -0.14 16 25 C 0.12 0.22 7.25 -83.97 -0.61 -0.39 16 26 C -0.10 -0.16 9.61 -39.42 -0.38 -0.54 16 27 H 0.38 -1.11 8.74 45.56 0.40 -0.71 16 28 H 0.08 -0.15 7.96 -51.93 -0.41 -0.56 16 29 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 30 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 31 H 0.13 -0.16 4.82 -52.49 -0.25 -0.41 16 32 H 0.13 -0.15 8.06 -52.49 -0.42 -0.58 16 33 H 0.16 0.26 8.06 -52.49 -0.42 -0.16 16 34 H 0.39 -0.96 5.92 -40.82 -0.24 -1.20 16 35 H 0.10 0.09 7.58 -51.93 -0.39 -0.30 16 36 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 40 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 43 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 44 H 0.07 -0.02 7.61 -51.93 -0.39 -0.41 16 45 H 0.38 -1.18 9.05 45.56 0.41 -0.77 16 46 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 47 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 48 H 0.06 -0.11 6.51 -51.93 -0.34 -0.45 16 49 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 50 H 0.42 -1.09 8.12 -40.82 -0.33 -1.42 16 51 H 0.13 0.06 8.06 -52.49 -0.42 -0.37 16 LS Contribution 388.36 15.07 5.85 5.85 Total: 0.00 -8.51 388.36 -12.62 -21.13 By element: Atomic # 1 Polarization: -6.49 SS G_CDS: -6.67 Total: -13.16 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -5.65 Total: -3.98 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.28 Total: 0.06 kcal Atomic # 8 Polarization: -3.38 SS G_CDS: -0.82 Total: -4.20 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.06 Total: -5.70 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -8.51 -12.62 -21.13 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_13158378.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.378 kcal (2) G-P(sol) polarization free energy of solvation -8.511 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.623 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.134 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds