Wall clock time and date at job start Thu Mar 4 2021 18:02:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86301 * 109.46823 * 2 1 4 4 C 1.50691 * 109.47384 * 239.99640 * 2 1 3 5 5 C 1.38903 * 119.67631 * 119.97756 * 4 2 1 6 6 C 1.36478 * 120.61804 * 179.97438 * 5 4 2 7 7 C 1.40064 * 119.82590 * 0.10272 * 6 5 4 8 8 C 1.41595 * 133.37926 * 179.97438 * 7 6 5 9 9 C 1.35860 * 107.72914 * 179.97438 * 8 7 6 10 10 C 1.47062 * 125.42965 * 179.97438 * 9 8 7 11 11 O 1.21643 * 119.99738 * 0.02562 * 10 9 8 12 12 N 1.34773 * 120.00094 * 180.02562 * 10 9 8 13 13 C 1.46499 * 120.00031 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47695 * 204.99801 * 13 12 10 15 15 C 1.52997 * 109.47457 * 179.97438 * 14 13 12 16 16 C 1.53002 * 109.46817 * 60.00169 * 15 14 13 17 17 C 1.52996 * 109.47346 * 299.99737 * 16 15 14 18 18 C 1.53002 * 109.46891 * 59.99997 * 17 16 15 19 19 C 1.52997 * 109.46978 * 60.00410 * 18 17 16 20 20 C 1.53006 * 109.47164 * 299.99874 * 19 18 17 21 21 O 1.42895 * 109.47000 * 180.02562 * 20 19 18 22 22 C 1.52997 * 109.47127 * 59.99836 * 20 19 18 23 23 C 1.52999 * 109.46623 * 299.99900 * 20 19 18 24 24 N 1.38149 * 109.14698 * 0.24618 * 9 8 7 25 25 C 1.37487 * 108.79025 * 359.59603 * 24 9 8 26 26 C 1.37709 * 119.67715 * 299.99755 * 4 2 1 27 27 H 0.96695 * 114.00384 * 300.00435 * 1 2 3 28 28 H 1.08996 * 109.46719 * 119.99383 * 2 1 3 29 29 H 1.48509 * 109.99951 * 299.99618 * 3 2 1 30 30 H 1.48500 * 110.00548 * 61.31295 * 3 2 1 31 31 H 1.07998 * 119.68788 * 0.02562 * 5 4 2 32 32 H 1.07997 * 120.08516 * 180.02562 * 6 5 4 33 33 H 1.08001 * 126.13736 * 359.97438 * 8 7 6 34 34 H 0.96998 * 120.00452 * 359.97438 * 12 10 9 35 35 H 1.09004 * 109.47041 * 324.99924 * 13 12 10 36 36 H 1.09001 * 109.46989 * 59.99548 * 14 13 12 37 37 H 1.08993 * 109.47194 * 299.99651 * 15 14 13 38 38 H 1.09002 * 109.46695 * 179.97438 * 15 14 13 39 39 H 1.09004 * 109.46733 * 179.97438 * 16 15 14 40 40 H 1.08992 * 109.47554 * 180.02562 * 17 16 15 41 41 H 1.09004 * 109.47108 * 300.00289 * 17 16 15 42 42 H 1.09002 * 109.47097 * 180.02562 * 18 17 16 43 43 H 1.09001 * 109.47375 * 59.99908 * 19 18 17 44 44 H 1.09000 * 109.47140 * 179.97438 * 19 18 17 45 45 H 0.96696 * 114.00485 * 299.99339 * 21 20 19 46 46 H 1.09002 * 109.47153 * 180.02562 * 22 20 19 47 47 H 1.09001 * 109.46832 * 60.00321 * 22 20 19 48 48 H 1.09000 * 109.47486 * 299.99829 * 23 20 19 49 49 H 1.09002 * 109.46716 * 179.97438 * 23 20 19 50 50 H 0.97002 * 125.60917 * 179.75741 * 24 9 8 51 51 H 1.08002 * 120.09437 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 2.7292 -0.0288 -2.1405 6 6 3.1951 -0.6536 -3.2608 7 6 2.8657 -1.9940 -3.4989 8 6 3.1804 -2.9030 -4.5380 9 6 2.5823 -4.0875 -4.2466 10 6 2.6548 -5.3043 -5.0694 11 8 3.2912 -5.3004 -6.1061 12 7 2.0161 -6.4236 -4.6749 13 6 2.0878 -7.6355 -5.4949 14 6 0.8629 -8.5102 -5.2206 15 6 0.9376 -9.7755 -6.0774 16 6 2.2081 -10.5534 -5.7285 17 6 3.4331 -9.6788 -6.0028 18 6 3.3583 -8.4134 -5.1460 19 6 3.3292 -8.8005 -3.6661 20 6 2.1041 -9.6752 -3.3918 21 8 2.0766 -10.0363 -2.0095 22 6 2.1788 -10.9406 -4.2486 23 6 0.8337 -8.8973 -3.7407 24 7 1.8901 -3.9652 -3.0573 25 6 2.0558 -2.6873 -2.5779 26 6 1.5948 -2.0289 -1.4415 27 1 -0.3934 0.4417 0.7650 28 1 1.7923 -0.5137 0.8900 29 1 1.5615 2.4679 -1.2086 30 1 1.5878 2.4587 1.2241 31 1 2.9838 1.0050 -1.9594 32 1 3.8151 -0.1155 -3.9625 33 1 3.7870 -2.6924 -5.4064 34 1 1.5089 -6.4268 -3.8481 35 1 2.1089 -7.3600 -6.5493 36 1 -0.0422 -7.9562 -5.4695 37 1 0.9583 -9.4998 -7.1317 38 1 0.0650 -10.3988 -5.8816 39 1 2.2610 -11.4551 -6.3387 40 1 4.3382 -10.2331 -5.7547 41 1 3.4539 -9.4030 -7.0572 42 1 4.2309 -7.7900 -5.3418 43 1 4.2343 -9.3547 -3.4176 44 1 3.2764 -7.8990 -3.0557 45 1 2.8530 -10.5330 -1.7171 46 1 1.3059 -11.5635 -4.0535 47 1 3.0839 -11.4947 -4.0001 48 1 0.7805 -7.9958 -3.1303 49 1 -0.0390 -9.5206 -3.5457 50 1 1.3741 -4.6664 -2.6295 51 1 0.9740 -2.5503 -0.7280 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_13158378.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:02:11 Heat of formation + Delta-G solvation = -63.356679 kcal Electronic energy + Delta-G solvation = -34315.871807 eV Core-core repulsion = 29952.844121 eV Total energy + Delta-G solvation = -4363.027685 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.177 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -43.03343 -42.55705 -40.38328 -38.89061 -37.53720 -37.10020 -35.91559 -33.80709 -33.37839 -32.61848 -31.76292 -30.94837 -30.44437 -27.52768 -27.02675 -26.23648 -24.35116 -23.36228 -22.85705 -22.40173 -22.18668 -21.87723 -21.02716 -19.83770 -18.70788 -18.53264 -18.01927 -17.98720 -17.20169 -16.86303 -16.56387 -16.42161 -15.93895 -15.89268 -15.53773 -15.44786 -15.15783 -15.09736 -15.06458 -14.82072 -14.70323 -14.58569 -14.31148 -14.27320 -13.90119 -13.76995 -13.57814 -13.49083 -13.39104 -13.09896 -12.73107 -12.34409 -12.23576 -12.16908 -12.10632 -11.98971 -11.94161 -11.71778 -11.66478 -11.36093 -11.28160 -10.99771 -10.85059 -10.50141 -10.46050 -10.19838 -9.35039 -8.84711 -4.87694 -0.39386 0.50402 0.91586 1.32834 1.63831 1.71651 1.90975 2.00111 2.14350 2.71519 3.06427 3.35110 3.38865 3.40962 3.53312 3.63244 3.75445 3.83238 3.85030 3.92673 4.02607 4.04454 4.10844 4.13117 4.17927 4.19790 4.22107 4.26164 4.29660 4.42258 4.45002 4.53218 4.58551 4.62644 4.64602 4.66212 4.86428 4.87916 4.91906 4.95526 4.96625 4.98013 5.02454 5.06951 5.13019 5.17160 5.27280 5.30058 5.36892 5.37751 5.42928 5.43528 5.52497 5.56227 5.95514 6.19455 6.37258 6.60616 6.80163 6.89699 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.084 4.084 3 Si 0.766 3.234 4 C -0.052 4.052 5 C -0.149 4.149 6 C -0.057 4.057 7 C -0.135 4.135 8 C -0.115 4.115 9 C 0.008 3.992 10 C 0.587 3.413 11 O -0.555 6.555 12 N -0.707 5.707 13 C 0.156 3.844 14 C -0.084 4.084 15 C -0.109 4.109 16 C -0.084 4.084 17 C -0.108 4.108 18 C -0.090 4.090 19 C -0.131 4.131 20 C 0.137 3.863 21 O -0.576 6.576 22 C -0.134 4.134 23 C -0.101 4.101 24 N -0.566 5.566 25 C 0.107 3.893 26 C -0.112 4.112 27 H 0.395 0.605 28 H 0.099 0.901 29 H -0.299 1.299 30 H -0.287 1.287 31 H 0.146 0.854 32 H 0.151 0.849 33 H 0.158 0.842 34 H 0.406 0.594 35 H 0.081 0.919 36 H 0.092 0.908 37 H 0.074 0.926 38 H 0.080 0.920 39 H 0.086 0.914 40 H 0.072 0.928 41 H 0.067 0.933 42 H 0.059 0.941 43 H 0.071 0.929 44 H 0.060 0.940 45 H 0.389 0.611 46 H 0.070 0.930 47 H 0.071 0.929 48 H 0.067 0.933 49 H 0.077 0.923 50 H 0.429 0.571 51 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.555 -2.735 3.722 4.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.193 4.193 3 Si 0.671 3.329 4 C -0.053 4.053 5 C -0.167 4.167 6 C -0.076 4.076 7 C -0.139 4.139 8 C -0.142 4.142 9 C -0.102 4.102 10 C 0.375 3.625 11 O -0.434 6.434 12 N -0.359 5.359 13 C 0.052 3.948 14 C -0.103 4.103 15 C -0.147 4.147 16 C -0.102 4.102 17 C -0.146 4.146 18 C -0.110 4.110 19 C -0.169 4.169 20 C 0.096 3.904 21 O -0.384 6.384 22 C -0.172 4.172 23 C -0.139 4.139 24 N -0.172 5.172 25 C -0.003 4.003 26 C -0.133 4.133 27 H 0.246 0.754 28 H 0.116 0.884 29 H -0.227 1.227 30 H -0.215 1.215 31 H 0.163 0.837 32 H 0.168 0.832 33 H 0.175 0.825 34 H 0.243 0.757 35 H 0.099 0.901 36 H 0.110 0.890 37 H 0.092 0.908 38 H 0.099 0.901 39 H 0.104 0.896 40 H 0.090 0.910 41 H 0.086 0.914 42 H 0.078 0.922 43 H 0.090 0.910 44 H 0.079 0.921 45 H 0.239 0.761 46 H 0.089 0.911 47 H 0.090 0.910 48 H 0.085 0.915 49 H 0.095 0.905 50 H 0.269 0.731 51 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 0.239 -2.109 2.428 3.224 hybrid contribution -0.999 -0.663 1.024 1.577 sum -0.761 -2.771 3.451 4.491 Atomic orbital electron populations 1.86547 1.18445 1.80722 1.51116 1.25005 0.84105 1.11832 0.98327 0.94025 0.90468 0.72092 0.76293 1.19227 0.97291 0.93042 0.95778 1.20655 1.00675 1.00479 0.94893 1.20621 0.98035 0.91793 0.97106 1.18436 1.03403 0.95629 0.96474 1.21094 1.02196 0.90876 1.00011 1.20024 1.03670 0.96310 0.90165 1.17260 0.79024 0.82085 0.84174 1.90849 1.43141 1.84351 1.25013 1.45924 1.52360 1.10736 1.26830 1.21039 0.95483 0.82990 0.95279 1.21308 0.97202 0.96628 0.95116 1.21581 0.98303 0.95130 0.99660 1.21068 0.94568 0.98712 0.95855 1.21552 0.98591 0.94812 0.99609 1.21337 0.97375 0.96902 0.95398 1.22126 0.98685 1.00180 0.95875 1.21067 0.94712 0.93633 0.80946 1.86507 1.48664 1.77739 1.25536 1.22174 1.02934 0.97039 0.95072 1.21459 0.97129 1.00069 0.95204 1.41789 1.44686 1.11251 1.19435 1.18435 1.00162 0.85116 0.96625 1.19987 1.02552 0.94604 0.96123 0.75430 0.88353 1.22698 1.21464 0.83686 0.83157 0.82478 0.75740 0.90093 0.88971 0.90779 0.90137 0.89578 0.90977 0.91399 0.92250 0.91044 0.92126 0.76103 0.91107 0.90987 0.91474 0.90471 0.73101 0.84775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.84 12.73 -148.98 -1.90 -2.74 16 2 C -0.08 0.09 2.80 71.23 0.20 0.29 16 3 Si 0.77 -1.74 29.75 68.60 2.04 0.30 16 4 C -0.05 -0.13 5.43 -19.83 -0.11 -0.23 16 5 C -0.15 -0.22 8.59 22.02 0.19 -0.03 16 6 C -0.06 -0.14 10.06 22.30 0.22 0.08 16 7 C -0.13 -0.75 6.16 -21.36 -0.13 -0.88 16 8 C -0.11 -0.73 10.53 22.55 0.24 -0.49 16 9 C 0.01 0.04 6.97 39.91 0.28 0.32 16 10 C 0.59 3.47 7.76 86.56 0.67 4.14 16 11 O -0.56 -7.36 16.50 -4.17 -0.07 -7.43 16 12 N -0.71 0.26 4.23 -446.15 -1.89 -1.63 16 13 C 0.16 -0.05 2.05 44.99 0.09 0.04 16 14 C -0.08 0.33 2.88 -10.79 -0.03 0.30 16 15 C -0.11 0.51 5.19 30.59 0.16 0.67 16 16 C -0.08 0.36 3.19 -10.79 -0.03 0.32 16 17 C -0.11 0.25 5.19 30.59 0.16 0.41 16 18 C -0.09 0.01 2.88 -10.79 -0.03 -0.02 16 19 C -0.13 0.23 4.66 30.60 0.14 0.37 16 20 C 0.14 -0.36 1.15 -10.79 -0.01 -0.37 16 21 O -0.58 0.41 12.98 -148.98 -1.93 -1.53 16 22 C -0.13 0.53 4.82 30.59 0.15 0.67 16 23 C -0.10 0.33 4.67 30.60 0.14 0.47 16 24 N -0.57 -0.44 6.07 -177.18 -1.08 -1.51 16 25 C 0.11 0.45 7.25 39.13 0.28 0.73 16 26 C -0.11 -0.34 9.61 22.37 0.22 -0.13 16 27 H 0.40 -2.57 8.74 -74.06 -0.65 -3.21 16 28 H 0.10 -0.53 7.96 -2.39 -0.02 -0.55 16 29 H -0.30 -1.59 7.11 99.48 0.71 -0.88 16 30 H -0.29 -0.51 7.11 99.48 0.71 0.19 16 31 H 0.15 -0.40 4.82 -2.91 -0.01 -0.41 16 32 H 0.15 -0.32 8.06 -2.91 -0.02 -0.34 16 33 H 0.16 0.86 8.06 -2.91 -0.02 0.84 16 34 H 0.41 -1.92 5.92 -92.71 -0.55 -2.47 16 35 H 0.08 0.28 7.58 -2.38 -0.02 0.26 16 36 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 37 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 38 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 39 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 40 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 41 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 42 H 0.06 0.28 8.14 -2.39 -0.02 0.26 16 43 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 44 H 0.06 -0.01 7.61 -2.39 -0.02 -0.03 16 45 H 0.39 -2.65 9.05 -74.06 -0.67 -3.32 16 46 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 47 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 48 H 0.07 -0.28 6.51 -2.39 -0.02 -0.29 16 49 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 50 H 0.43 -2.27 8.12 -92.71 -0.75 -3.02 16 51 H 0.13 0.06 8.06 -2.91 -0.02 0.04 16 Total: 0.00 -20.33 388.36 -3.60 -23.94 By element: Atomic # 1 Polarization: -14.48 SS G_CDS: -1.57 Total: -16.05 kcal Atomic # 6 Polarization: 3.86 SS G_CDS: 2.79 Total: 6.65 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -2.96 Total: -3.14 kcal Atomic # 8 Polarization: -7.80 SS G_CDS: -3.90 Total: -11.70 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: 2.04 Total: 0.30 kcal Total: -20.33 -3.60 -23.94 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_13158378.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.419 kcal (2) G-P(sol) polarization free energy of solvation -20.334 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.754 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.603 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.937 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.357 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds