Wall clock time and date at job start Thu Mar 4 2021 18:02:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 N 1.28467 * 124.88080 * 2 1 4 4 C 1.31809 * 110.07252 * 180.02562 * 3 2 1 5 5 C 1.47712 * 126.52011 * 180.02562 * 4 3 2 6 6 O 1.21567 * 120.00112 * 180.02562 * 5 4 3 7 7 N 1.34780 * 119.99964 * 0.02757 * 5 4 3 8 8 C 1.46500 * 119.99944 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.46927 * 155.00048 * 8 7 5 10 10 C 1.52997 * 109.47457 * 59.99484 * 9 8 7 11 11 C 1.53002 * 109.46817 * 60.00169 * 10 9 8 12 12 C 1.52996 * 109.47346 * 299.99737 * 11 10 9 13 13 C 1.53002 * 109.46891 * 59.99997 * 12 11 10 14 14 C 1.52997 * 109.46978 * 60.00410 * 13 12 11 15 15 C 1.53006 * 109.47164 * 299.99874 * 14 13 12 16 16 O 1.42895 * 109.47000 * 180.02562 * 15 14 13 17 17 C 1.52997 * 109.47127 * 59.99836 * 15 14 13 18 18 C 1.52999 * 109.46623 * 299.99900 * 15 14 13 19 19 C 1.41502 * 106.96322 * 0.26198 * 4 3 2 20 20 C 1.35031 * 124.88603 * 179.97438 * 2 1 3 21 21 C 1.50702 * 126.38796 * 0.02562 * 20 2 1 22 22 O 1.42903 * 109.46681 * 29.99471 * 21 20 2 23 23 Si 1.86296 * 109.47116 * 149.99704 * 21 20 2 24 24 H 1.09002 * 109.46742 * 90.02761 * 1 2 3 25 25 H 1.08999 * 109.46922 * 210.02463 * 1 2 3 26 26 H 1.08993 * 109.47080 * 330.02381 * 1 2 3 27 27 H 0.97001 * 119.99485 * 359.97438 * 7 5 4 28 28 H 1.09000 * 109.47381 * 34.99693 * 8 7 5 29 29 H 1.09001 * 109.46989 * 299.99155 * 9 8 7 30 30 H 1.08993 * 109.47194 * 299.99651 * 10 9 8 31 31 H 1.09002 * 109.46695 * 179.97438 * 10 9 8 32 32 H 1.09004 * 109.46733 * 179.97438 * 11 10 9 33 33 H 1.08992 * 109.47554 * 180.02562 * 12 11 10 34 34 H 1.09004 * 109.47108 * 300.00289 * 12 11 10 35 35 H 1.09002 * 109.47097 * 180.02562 * 13 12 11 36 36 H 1.09001 * 109.47375 * 59.99908 * 14 13 12 37 37 H 1.09000 * 109.47140 * 179.97438 * 14 13 12 38 38 H 0.96696 * 114.00485 * 299.99339 * 16 15 14 39 39 H 1.09002 * 109.47153 * 180.02562 * 17 15 14 40 40 H 1.09001 * 109.46832 * 60.00321 * 17 15 14 41 41 H 1.09000 * 109.47486 * 299.99829 * 18 15 14 42 42 H 1.09002 * 109.46716 * 179.97438 * 18 15 14 43 43 H 1.07999 * 127.25028 * 179.73545 * 19 4 3 44 44 H 1.09001 * 109.46634 * 269.99913 * 21 20 2 45 45 H 0.96699 * 113.99787 * 60.00730 * 22 21 20 46 46 H 1.48496 * 110.00046 * 58.68452 * 23 21 20 47 47 H 1.48504 * 109.99838 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7170 -0.0006 5 6 4.6272 1.6400 -0.0002 6 8 5.7597 1.1978 -0.0013 7 7 4.4240 2.9724 0.0013 8 6 5.5678 3.8878 0.0011 9 6 5.1484 5.2277 -0.6068 10 6 4.0127 5.8307 0.2222 11 6 4.4908 6.0499 1.6590 12 6 4.9101 4.7100 2.2670 13 6 6.0458 4.1069 1.4379 14 6 7.2403 5.0629 1.4378 15 6 6.8210 6.4030 0.8298 16 8 7.9369 7.2956 0.8292 17 6 5.6853 7.0060 1.6588 18 6 6.3430 6.1837 -0.6069 19 6 3.5272 -0.6970 -0.0071 20 6 2.2373 -1.1076 0.0005 21 6 1.7535 -2.5349 0.0006 22 8 0.4957 -2.6114 -0.6734 23 14 2.9950 -3.6115 -0.8770 24 1 -0.3633 -0.0005 -1.0277 25 1 -0.3633 -0.8898 0.5142 26 1 -0.3633 0.8901 0.5134 27 1 3.5204 3.3251 0.0018 28 1 6.3770 3.4582 -0.5895 29 1 4.8079 5.0716 -1.6304 30 1 3.1617 5.1497 0.2223 31 1 3.7143 6.7856 -0.2107 32 1 3.6817 6.4799 2.2495 33 1 5.2503 4.8660 3.2906 34 1 4.0591 4.0288 2.2671 35 1 6.3443 3.1521 1.8708 36 1 7.5810 5.2190 2.4614 37 1 8.0496 4.6331 0.8475 38 1 8.2932 7.4806 1.7088 39 1 5.3863 7.9604 1.2255 40 1 6.0259 7.1621 2.6824 41 1 7.1522 5.7541 -1.1976 42 1 6.0439 7.1383 -1.0399 43 1 4.4109 -1.3179 -0.0133 44 1 1.6365 -2.8787 1.0283 45 1 0.5251 -2.3202 -1.5950 46 1 4.3155 -3.5158 -0.2045 47 1 2.5292 -5.0216 -0.8843 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_13259642.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:02:21 Heat of formation + Delta-G solvation = -45.042550 kcal Electronic energy + Delta-G solvation = -30497.800966 eV Core-core repulsion = 26454.819951 eV Total energy + Delta-G solvation = -4042.981015 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.173 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -43.87719 -42.83977 -40.27298 -38.02917 -37.61039 -35.41651 -34.43641 -33.78152 -33.19634 -32.60016 -31.08535 -28.62653 -27.07589 -27.00818 -26.38176 -24.24591 -22.81889 -22.55799 -22.39783 -21.98546 -20.74441 -19.39243 -18.63820 -18.02149 -17.62111 -17.55670 -17.08511 -16.82872 -16.22891 -15.90907 -15.87238 -15.64220 -15.44231 -15.24269 -15.20909 -15.06733 -15.01341 -14.43082 -14.23758 -14.02392 -13.62205 -13.58782 -13.54386 -13.44733 -13.39072 -13.06277 -12.62886 -12.58383 -12.36830 -12.07078 -11.98437 -11.87843 -11.83921 -11.40557 -11.36927 -11.22685 -10.94083 -10.87207 -10.42821 -10.28178 -10.00987 -9.97685 -4.98563 0.41272 0.78303 1.18318 1.53169 1.69691 1.95368 2.06258 2.25925 3.11503 3.18319 3.30110 3.34348 3.39313 3.42311 3.79649 3.85021 3.94824 3.97607 4.05178 4.12496 4.16082 4.21180 4.23602 4.29221 4.34964 4.36358 4.41265 4.46997 4.54779 4.58297 4.60753 4.67686 4.74365 4.76229 4.84215 4.98498 4.98866 4.99962 5.02054 5.09512 5.13242 5.18381 5.28330 5.31074 5.36226 5.44467 5.48439 5.66028 6.34981 6.56040 6.79637 6.84785 7.08447 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.076 3.924 2 N -0.257 5.257 3 N -0.258 5.258 4 C -0.038 4.038 5 C 0.603 3.397 6 O -0.570 6.570 7 N -0.696 5.696 8 C 0.157 3.843 9 C -0.082 4.082 10 C -0.112 4.112 11 C -0.081 4.081 12 C -0.105 4.105 13 C -0.090 4.090 14 C -0.133 4.133 15 C 0.135 3.865 16 O -0.577 6.577 17 C -0.133 4.133 18 C -0.098 4.098 19 C -0.199 4.199 20 C -0.005 4.005 21 C -0.033 4.033 22 O -0.542 6.542 23 Si 0.786 3.214 24 H 0.110 0.890 25 H 0.115 0.885 26 H 0.100 0.900 27 H 0.414 0.586 28 H 0.070 0.930 29 H 0.092 0.908 30 H 0.073 0.927 31 H 0.082 0.918 32 H 0.087 0.913 33 H 0.067 0.933 34 H 0.061 0.939 35 H 0.055 0.945 36 H 0.077 0.923 37 H 0.059 0.941 38 H 0.390 0.610 39 H 0.073 0.927 40 H 0.072 0.928 41 H 0.062 0.938 42 H 0.080 0.920 43 H 0.158 0.842 44 H 0.128 0.872 45 H 0.398 0.602 46 H -0.293 1.293 47 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.305 1.160 -1.066 7.473 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.047 5.047 3 N -0.096 5.096 4 C -0.196 4.196 5 C 0.389 3.611 6 O -0.447 6.447 7 N -0.348 5.348 8 C 0.052 3.948 9 C -0.101 4.101 10 C -0.149 4.149 11 C -0.099 4.099 12 C -0.143 4.143 13 C -0.110 4.110 14 C -0.171 4.171 15 C 0.095 3.905 16 O -0.385 6.385 17 C -0.170 4.170 18 C -0.136 4.136 19 C -0.227 4.227 20 C -0.131 4.131 21 C -0.145 4.145 22 O -0.350 6.350 23 Si 0.690 3.310 24 H 0.129 0.871 25 H 0.133 0.867 26 H 0.118 0.882 27 H 0.252 0.748 28 H 0.088 0.912 29 H 0.110 0.890 30 H 0.091 0.909 31 H 0.101 0.899 32 H 0.105 0.895 33 H 0.085 0.915 34 H 0.080 0.920 35 H 0.073 0.927 36 H 0.095 0.905 37 H 0.078 0.922 38 H 0.239 0.761 39 H 0.092 0.908 40 H 0.091 0.909 41 H 0.081 0.919 42 H 0.099 0.901 43 H 0.176 0.824 44 H 0.145 0.855 45 H 0.249 0.751 46 H -0.220 1.220 47 H -0.207 1.207 Dipole moment (debyes) X Y Z Total from point charges -7.132 0.889 -1.084 7.268 hybrid contribution 0.499 -0.448 1.328 1.488 sum -6.633 0.440 0.244 6.652 Atomic orbital electron populations 1.22682 0.70245 1.06587 1.06665 1.45727 1.09100 1.01604 1.48224 1.73468 1.02381 1.14644 1.19119 1.21725 0.91029 0.94099 1.12708 1.17085 0.86364 0.82204 0.75488 1.90787 1.24059 1.77827 1.52042 1.45833 1.10990 1.04394 1.73557 1.20967 0.88146 0.89308 0.96344 1.21257 0.96017 0.92292 1.00491 1.21637 0.96783 1.01901 0.94585 1.21041 0.97530 0.94711 0.96636 1.21523 0.97459 0.96578 0.98741 1.21307 0.95867 0.98234 0.95553 1.22140 0.97362 0.95649 1.01934 1.21102 0.85779 0.87852 0.95766 1.86519 1.49024 1.67145 1.35821 1.22163 0.95395 0.99017 1.00452 1.21387 0.97182 1.00012 0.95002 1.21610 0.97331 0.93801 1.09957 1.22110 0.90550 0.92312 1.08127 1.24770 0.94656 0.91977 1.03065 1.86480 1.28723 1.89022 1.30745 0.93194 0.73479 0.75682 0.88652 0.87125 0.86658 0.88162 0.74800 0.91155 0.88993 0.90873 0.89931 0.89467 0.91451 0.92001 0.92659 0.90459 0.92215 0.76067 0.90826 0.90894 0.91931 0.90118 0.82437 0.85493 0.75108 1.21994 1.20693 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.65 10.12 127.77 1.29 0.64 16 2 N -0.26 0.18 3.70 -355.92 -1.32 -1.13 16 3 N -0.26 -0.94 11.67 -48.17 -0.56 -1.51 16 4 C -0.04 -0.28 7.13 42.46 0.30 0.02 16 5 C 0.60 5.93 7.79 86.75 0.68 6.61 16 6 O -0.57 -9.68 16.59 -3.93 -0.07 -9.75 16 7 N -0.70 -2.57 4.23 -445.53 -1.88 -4.45 16 8 C 0.16 0.53 2.05 44.99 0.09 0.62 16 9 C -0.08 0.08 2.88 -10.79 -0.03 0.05 16 10 C -0.11 0.42 5.02 30.59 0.15 0.57 16 11 C -0.08 0.24 3.19 -10.79 -0.03 0.21 16 12 C -0.11 0.03 5.04 30.59 0.15 0.18 16 13 C -0.09 -0.29 2.87 -10.79 -0.03 -0.32 16 14 C -0.13 -0.27 4.81 30.60 0.15 -0.12 16 15 C 0.14 0.11 1.15 -10.79 -0.01 0.09 16 16 O -0.58 -1.53 12.98 -148.98 -1.93 -3.47 16 17 C -0.13 0.29 4.82 30.59 0.15 0.43 16 18 C -0.10 -0.11 4.84 30.60 0.15 0.04 16 19 C -0.20 -1.10 9.35 22.41 0.21 -0.89 16 20 C -0.01 0.00 6.18 41.40 0.26 0.26 16 21 C -0.03 0.15 2.87 71.24 0.20 0.35 16 22 O -0.54 4.11 10.40 -148.98 -1.55 2.56 16 23 Si 0.79 -2.67 31.35 68.60 2.15 -0.52 16 24 H 0.11 -1.40 8.14 -2.39 -0.02 -1.42 16 25 H 0.12 -1.10 6.77 -2.39 -0.02 -1.11 16 26 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 27 H 0.41 0.07 6.59 -92.71 -0.61 -0.54 16 28 H 0.07 0.57 7.58 -2.39 -0.02 0.55 16 29 H 0.09 -0.18 8.14 -2.39 -0.02 -0.20 16 30 H 0.07 -0.37 6.51 -2.39 -0.02 -0.38 16 31 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 32 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 33 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 34 H 0.06 0.05 7.60 -2.38 -0.02 0.03 16 35 H 0.05 0.46 8.14 -2.39 -0.02 0.44 16 36 H 0.08 0.01 8.14 -2.39 -0.02 -0.01 16 37 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 38 H 0.39 -1.68 9.05 -74.06 -0.67 -2.35 16 39 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 40 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 41 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 42 H 0.08 0.05 8.14 -2.39 -0.02 0.03 16 43 H 0.16 1.00 6.83 -2.91 -0.02 0.98 16 44 H 0.13 -0.57 7.96 -2.39 -0.02 -0.59 16 45 H 0.40 -5.84 8.70 -74.06 -0.64 -6.48 16 46 H -0.29 -1.14 6.83 99.48 0.68 -0.46 16 47 H -0.28 -0.57 7.11 99.48 0.71 0.14 16 Total: 0.00 -20.35 358.42 -2.38 -22.73 By element: Atomic # 1 Polarization: -12.30 SS G_CDS: -0.90 Total: -13.20 kcal Atomic # 6 Polarization: 5.06 SS G_CDS: 3.68 Total: 8.74 kcal Atomic # 7 Polarization: -3.33 SS G_CDS: -3.76 Total: -7.09 kcal Atomic # 8 Polarization: -7.11 SS G_CDS: -3.55 Total: -10.66 kcal Atomic # 14 Polarization: -2.67 SS G_CDS: 2.15 Total: -0.52 kcal Total: -20.35 -2.38 -22.73 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_13259642.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.312 kcal (2) G-P(sol) polarization free energy of solvation -20.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.661 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.730 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.043 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds