Wall clock time and date at job start Thu Mar 4 2021 18:02:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46752 * 2 1 4 4 C 1.50696 * 109.47355 * 119.99985 * 2 1 3 5 5 C 1.34183 * 126.54454 * 254.97729 * 4 2 1 6 6 N 1.36862 * 109.97193 * 180.02562 * 5 4 2 7 7 C 1.37412 * 109.97620 * 359.97438 * 6 5 4 8 8 C 1.39328 * 133.24688 * 179.97438 * 7 6 5 9 9 C 1.36352 * 120.23338 * 180.02562 * 8 7 6 10 10 C 1.40169 * 120.66887 * 359.97438 * 9 8 7 11 11 C 1.47657 * 119.97048 * 179.97438 * 10 9 8 12 12 O 1.21578 * 119.99753 * 179.97438 * 11 10 9 13 13 N 1.34773 * 120.00036 * 0.02562 * 11 10 9 14 14 C 1.46499 * 120.00031 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47695 * 204.99801 * 14 13 11 16 16 C 1.52997 * 109.47457 * 179.97438 * 15 14 13 17 17 C 1.53002 * 109.46817 * 60.00169 * 16 15 14 18 18 C 1.52996 * 109.47346 * 299.99737 * 17 16 15 19 19 C 1.53002 * 109.46891 * 59.99997 * 18 17 16 20 20 C 1.52997 * 109.46978 * 60.00410 * 19 18 17 21 21 C 1.53006 * 109.47164 * 299.99874 * 20 19 18 22 22 O 1.42895 * 109.47000 * 180.02562 * 21 20 19 23 23 C 1.52997 * 109.47127 * 59.99836 * 21 20 19 24 24 C 1.52999 * 109.46623 * 299.99900 * 21 20 19 25 25 C 1.39184 * 120.05608 * 0.26219 * 10 9 8 26 26 C 1.39239 * 119.39046 * 359.49150 * 25 10 9 27 27 H 0.96707 * 114.00018 * 299.99174 * 1 2 3 28 28 H 1.08999 * 109.46773 * 240.00875 * 2 1 3 29 29 H 1.48492 * 110.00341 * 300.00302 * 3 2 1 30 30 H 1.48507 * 110.00084 * 61.32538 * 3 2 1 31 31 H 1.08003 * 125.01242 * 0.03886 * 5 4 2 32 32 H 0.96994 * 125.01575 * 180.02562 * 6 5 4 33 33 H 1.07996 * 119.88394 * 0.06657 * 8 7 6 34 34 H 1.08003 * 119.66424 * 179.97438 * 9 8 7 35 35 H 0.96998 * 120.00452 * 359.97438 * 13 11 10 36 36 H 1.09004 * 109.47041 * 324.99924 * 14 13 11 37 37 H 1.09001 * 109.46989 * 59.99548 * 15 14 13 38 38 H 1.08993 * 109.47194 * 299.99651 * 16 15 14 39 39 H 1.09002 * 109.46695 * 179.97438 * 16 15 14 40 40 H 1.09004 * 109.46733 * 179.97438 * 17 16 15 41 41 H 1.08992 * 109.47554 * 180.02562 * 18 17 16 42 42 H 1.09004 * 109.47108 * 300.00289 * 18 17 16 43 43 H 1.09002 * 109.47097 * 180.02562 * 19 18 17 44 44 H 1.09001 * 109.47375 * 59.99908 * 20 19 18 45 45 H 1.09000 * 109.47140 * 179.97438 * 20 19 18 46 46 H 0.96696 * 114.00485 * 299.99339 * 22 21 20 47 47 H 1.09002 * 109.47153 * 180.02562 * 23 21 20 48 48 H 1.09001 * 109.46832 * 60.00321 * 23 21 20 49 49 H 1.09000 * 109.47486 * 299.99829 * 24 21 20 50 50 H 1.09002 * 109.46716 * 179.97438 * 24 21 20 51 51 H 1.07993 * 120.30424 * 179.74467 * 25 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4612 -0.1388 2.3227 6 7 2.8036 -1.1005 3.2342 7 6 2.4954 -2.3456 2.7411 8 6 2.6347 -3.6351 3.2499 9 6 2.2303 -4.7104 2.5155 10 6 1.6700 -4.5367 1.2424 11 6 1.2378 -5.7121 0.4601 12 8 0.7513 -5.5620 -0.6439 13 7 1.3818 -6.9512 0.9704 14 6 0.9525 -8.1173 0.1944 15 6 0.6306 -9.2721 1.1450 16 6 0.1817 -10.4898 0.3346 17 6 1.3032 -10.9104 -0.6174 18 6 1.6251 -9.7556 -1.5681 19 6 2.0739 -8.5379 -0.7576 20 6 3.3223 -8.8957 0.0513 21 6 3.0004 -10.0506 1.0019 22 8 4.1662 -10.3843 1.7578 23 6 2.5515 -11.2682 0.1915 24 6 1.8790 -9.6299 1.9539 25 6 1.5261 -3.2577 0.7127 26 6 1.9334 -2.1576 1.4628 27 1 -0.3933 0.4416 0.7652 28 1 1.7923 -0.5137 -0.8901 29 1 1.5613 2.4680 -1.2084 30 1 1.5879 2.4586 1.2244 31 1 2.5971 0.9236 2.4621 32 1 3.2040 -0.9287 4.1007 33 1 3.0638 -3.7835 4.2298 34 1 2.3429 -5.7060 2.9187 35 1 1.7696 -7.0709 1.8513 36 1 0.0632 -7.8627 -0.3822 37 1 -0.1686 -8.9726 1.8230 38 1 -0.7077 -10.2349 -0.2416 39 1 -0.0472 -11.3126 1.0119 40 1 0.9835 -11.7781 -1.1945 41 1 2.4237 -10.0554 -2.2466 42 1 0.7357 -9.5007 -2.1444 43 1 2.3029 -7.7151 -1.4349 44 1 4.1213 -9.1953 -0.6270 45 1 3.6424 -8.0281 0.6283 46 1 4.9193 -10.6607 1.2180 47 1 2.3218 -12.0908 0.8688 48 1 3.3505 -11.5678 -0.4867 49 1 2.1988 -8.7624 2.5313 50 1 1.6494 -10.4528 2.6309 51 1 1.0987 -3.1195 -0.2694 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_13287722.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:02:30 Heat of formation + Delta-G solvation = -66.349467 kcal Electronic energy + Delta-G solvation = -34580.546650 eV Core-core repulsion = 30217.389187 eV Total energy + Delta-G solvation = -4363.157462 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.177 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -42.89336 -42.43249 -40.54394 -38.08176 -37.60464 -37.36543 -35.80259 -33.76386 -33.31115 -32.58465 -31.70201 -30.74864 -30.30313 -26.98914 -26.84148 -26.49660 -24.66088 -23.52040 -22.87064 -22.46007 -22.30439 -21.24468 -20.76261 -19.43577 -19.02760 -18.35058 -17.91429 -17.56455 -17.29612 -16.90717 -16.32096 -16.13253 -15.89637 -15.81367 -15.67249 -15.41425 -15.30284 -15.12717 -14.99999 -14.81625 -14.75802 -14.59480 -14.26488 -14.11642 -13.85086 -13.69568 -13.56315 -13.50147 -13.34359 -13.02798 -12.65410 -12.52455 -12.17244 -12.15667 -12.04529 -11.93892 -11.89243 -11.80220 -11.59479 -11.24580 -11.06727 -10.82762 -10.79054 -10.48989 -10.44332 -10.08197 -9.34958 -8.83264 -4.86999 -0.17144 0.17992 1.34835 1.50232 1.61195 1.82490 2.00827 2.06588 2.11103 2.86347 3.11567 3.41063 3.46041 3.51297 3.59708 3.70235 3.80142 3.82047 3.88088 3.90030 3.97217 4.08973 4.11848 4.14986 4.17335 4.22608 4.25892 4.30816 4.35221 4.45143 4.52039 4.57239 4.58957 4.66933 4.68216 4.69934 4.78745 4.93149 4.98017 4.99046 4.99233 5.01790 5.05214 5.10456 5.15484 5.24668 5.28071 5.32498 5.34255 5.40212 5.44875 5.46843 5.52003 5.56204 5.96423 6.46685 6.54597 6.60711 6.85296 7.15752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.064 4.064 3 Si 0.789 3.211 4 C -0.216 4.216 5 C 0.082 3.918 6 N -0.571 5.571 7 C 0.112 3.888 8 C -0.124 4.124 9 C -0.069 4.069 10 C -0.179 4.179 11 C 0.561 3.439 12 O -0.586 6.586 13 N -0.706 5.706 14 C 0.156 3.844 15 C -0.083 4.083 16 C -0.109 4.109 17 C -0.083 4.083 18 C -0.108 4.108 19 C -0.090 4.090 20 C -0.131 4.131 21 C 0.138 3.862 22 O -0.574 6.574 23 C -0.134 4.134 24 C -0.100 4.100 25 C -0.020 4.020 26 C -0.126 4.126 27 H 0.384 0.616 28 H 0.099 0.901 29 H -0.311 1.311 30 H -0.258 1.258 31 H 0.210 0.790 32 H 0.439 0.561 33 H 0.161 0.839 34 H 0.153 0.847 35 H 0.410 0.590 36 H 0.070 0.930 37 H 0.092 0.908 38 H 0.069 0.931 39 H 0.082 0.918 40 H 0.085 0.915 41 H 0.071 0.929 42 H 0.062 0.938 43 H 0.052 0.948 44 H 0.070 0.930 45 H 0.063 0.937 46 H 0.389 0.611 47 H 0.072 0.928 48 H 0.071 0.929 49 H 0.070 0.930 50 H 0.079 0.921 51 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.450 -0.008 7.137 8.980 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.171 4.171 3 Si 0.691 3.309 4 C -0.223 4.223 5 C -0.046 4.046 6 N -0.174 5.174 7 C 0.002 3.998 8 C -0.144 4.144 9 C -0.089 4.089 10 C -0.183 4.183 11 C 0.350 3.650 12 O -0.467 6.467 13 N -0.358 5.358 14 C 0.051 3.949 15 C -0.102 4.102 16 C -0.147 4.147 17 C -0.101 4.101 18 C -0.146 4.146 19 C -0.110 4.110 20 C -0.168 4.168 21 C 0.098 3.902 22 O -0.382 6.382 23 C -0.172 4.172 24 C -0.138 4.138 25 C -0.040 4.040 26 C -0.131 4.131 27 H 0.233 0.767 28 H 0.117 0.883 29 H -0.239 1.239 30 H -0.183 1.183 31 H 0.227 0.773 32 H 0.280 0.720 33 H 0.178 0.822 34 H 0.171 0.829 35 H 0.249 0.751 36 H 0.088 0.912 37 H 0.110 0.890 38 H 0.088 0.912 39 H 0.101 0.899 40 H 0.104 0.896 41 H 0.090 0.910 42 H 0.081 0.919 43 H 0.070 0.930 44 H 0.089 0.911 45 H 0.082 0.918 46 H 0.239 0.761 47 H 0.091 0.909 48 H 0.090 0.910 49 H 0.089 0.911 50 H 0.097 0.903 51 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 4.659 0.793 6.467 8.010 hybrid contribution -0.653 -0.252 0.035 0.700 sum 4.007 0.541 6.502 7.656 Atomic orbital electron populations 1.86600 1.19395 1.80643 1.49894 1.24783 0.82733 1.12511 0.97079 0.94077 0.89605 0.69927 0.77259 1.20756 1.11187 0.91412 0.98975 1.22180 0.98407 0.95716 0.88253 1.41763 1.53751 1.03137 1.18775 1.18600 0.99712 0.87807 0.93662 1.20036 1.04303 0.88027 1.02060 1.20824 0.96181 0.99993 0.91863 1.19588 1.08996 0.92339 0.97409 1.18481 0.77283 0.83960 0.85230 1.90758 1.46784 1.86789 1.22368 1.45895 1.63694 1.04705 1.21515 1.20950 0.96819 0.84505 0.92597 1.21300 0.97894 0.94328 0.96693 1.21584 0.97951 0.96966 0.98207 1.21060 0.94976 0.98021 0.96082 1.21555 1.01613 0.94049 0.97415 1.21316 0.95183 0.97846 0.96643 1.22124 0.97356 0.98967 0.98390 1.21043 0.85693 0.92951 0.90533 1.86505 1.23793 1.89342 1.38586 1.22173 0.98270 0.97704 0.99019 1.21451 0.92909 1.02176 0.97216 1.20583 0.94396 0.90649 0.98351 1.19191 1.05059 0.93545 0.95316 0.76700 0.88284 1.23938 1.18350 0.77349 0.71998 0.82155 0.82926 0.75143 0.91183 0.88992 0.91190 0.89911 0.89624 0.91046 0.91894 0.92974 0.91149 0.91836 0.76138 0.90885 0.91002 0.91115 0.90270 0.87428 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.03 12.88 -148.98 -1.92 -5.95 16 2 C -0.06 -0.19 3.06 71.23 0.22 0.03 16 3 Si 0.79 -2.22 30.82 68.60 2.11 -0.10 16 4 C -0.22 -0.47 5.58 -18.61 -0.10 -0.57 16 5 C 0.08 -0.39 10.43 82.98 0.87 0.48 16 6 N -0.57 3.17 6.05 -187.48 -1.13 2.03 16 7 C 0.11 0.09 7.27 39.18 0.28 0.37 16 8 C -0.12 0.25 10.00 22.09 0.22 0.47 16 9 C -0.07 -0.01 9.46 22.30 0.21 0.20 16 10 C -0.18 -1.36 5.87 -20.09 -0.12 -1.48 16 11 C 0.56 5.82 7.73 86.73 0.67 6.49 16 12 O -0.59 -11.26 15.99 -3.96 -0.06 -11.32 16 13 N -0.71 -2.18 4.19 -445.59 -1.86 -4.04 16 14 C 0.16 0.47 2.05 44.99 0.09 0.57 16 15 C -0.08 0.14 2.88 -10.79 -0.03 0.11 16 16 C -0.11 0.29 5.19 30.59 0.16 0.45 16 17 C -0.08 0.19 3.19 -10.79 -0.03 0.16 16 18 C -0.11 -0.05 5.19 30.59 0.16 0.11 16 19 C -0.09 -0.27 2.88 -10.79 -0.03 -0.30 16 20 C -0.13 -0.04 4.66 30.60 0.14 0.10 16 21 C 0.14 -0.18 1.15 -10.79 -0.01 -0.19 16 22 O -0.57 0.03 12.98 -148.98 -1.93 -1.90 16 23 C -0.13 0.36 4.82 30.59 0.15 0.50 16 24 C -0.10 0.20 4.67 30.60 0.14 0.34 16 25 C -0.02 -0.22 9.64 22.74 0.22 0.00 16 26 C -0.13 -0.83 6.34 -20.21 -0.13 -0.96 16 27 H 0.38 0.02 8.70 -74.05 -0.64 -0.63 16 28 H 0.10 0.50 7.96 -2.39 -0.02 0.48 16 29 H -0.31 -2.00 7.11 99.48 0.71 -1.29 16 30 H -0.26 0.77 7.00 99.48 0.70 1.46 16 31 H 0.21 -2.49 6.27 -2.91 -0.02 -2.51 16 32 H 0.44 -5.52 8.96 -92.71 -0.83 -6.35 16 33 H 0.16 -1.40 8.06 -2.91 -0.02 -1.43 16 34 H 0.15 -0.93 6.36 -2.91 -0.02 -0.95 16 35 H 0.41 -0.86 4.87 -92.71 -0.45 -1.31 16 36 H 0.07 0.56 7.58 -2.38 -0.02 0.54 16 37 H 0.09 -0.25 8.14 -2.39 -0.02 -0.27 16 38 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 39 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 40 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 41 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 42 H 0.06 0.11 8.14 -2.38 -0.02 0.09 16 43 H 0.05 0.45 8.14 -2.39 -0.02 0.43 16 44 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 45 H 0.06 0.11 7.61 -2.39 -0.02 0.09 16 46 H 0.39 -2.42 9.05 -74.06 -0.67 -3.09 16 47 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 48 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 49 H 0.07 -0.21 6.51 -2.39 -0.02 -0.23 16 50 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 51 H 0.11 1.68 7.64 -2.91 -0.02 1.66 16 Total: 0.00 -26.02 388.21 -3.29 -29.30 By element: Atomic # 1 Polarization: -13.34 SS G_CDS: -1.56 Total: -14.90 kcal Atomic # 6 Polarization: 3.81 SS G_CDS: 3.07 Total: 6.88 kcal Atomic # 7 Polarization: 0.99 SS G_CDS: -3.00 Total: -2.01 kcal Atomic # 8 Polarization: -15.26 SS G_CDS: -3.92 Total: -19.17 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: 2.11 Total: -0.10 kcal Total: -26.02 -3.29 -29.30 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_13287722.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.045 kcal (2) G-P(sol) polarization free energy of solvation -26.017 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.062 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.304 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds