Wall clock time and date at job start Thu Mar 4 2021 18:02:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86292 * 109.47668 * 2 1 4 4 C 1.50700 * 109.46806 * 120.00350 * 2 1 3 5 5 C 1.38584 * 120.32866 * 65.01905 * 4 2 1 6 6 C 1.38632 * 118.48806 * 179.71132 * 5 4 2 7 7 C 1.39269 * 119.06306 * 0.52842 * 6 5 4 8 8 C 1.48167 * 119.72444 * 179.73922 * 7 6 5 9 9 O 1.21520 * 119.99766 * 359.71945 * 8 7 6 10 10 N 1.34773 * 119.99892 * 179.72931 * 8 7 6 11 11 C 1.46499 * 120.00031 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47695 * 204.99801 * 11 10 8 13 13 C 1.52997 * 109.47457 * 179.97438 * 12 11 10 14 14 C 1.53002 * 109.46817 * 60.00169 * 13 12 11 15 15 C 1.52996 * 109.47346 * 299.99737 * 14 13 12 16 16 C 1.53002 * 109.46891 * 59.99997 * 15 14 13 17 17 C 1.52997 * 109.46978 * 60.00410 * 16 15 14 18 18 C 1.53006 * 109.47164 * 299.99874 * 17 16 15 19 19 O 1.42895 * 109.47000 * 180.02562 * 18 17 16 20 20 C 1.52997 * 109.47127 * 59.99836 * 18 17 16 21 21 C 1.52999 * 109.46623 * 299.99900 * 18 17 16 22 22 N 1.32743 * 120.55227 * 359.45715 * 7 6 5 23 23 C 1.31505 * 121.64465 * 0.27813 * 22 7 6 24 24 H 0.96697 * 113.99821 * 300.00420 * 1 2 3 25 25 H 1.09001 * 109.46895 * 239.99791 * 2 1 3 26 26 H 1.48505 * 110.00039 * 300.00074 * 3 2 1 27 27 H 1.48508 * 110.00047 * 61.31518 * 3 2 1 28 28 H 1.08003 * 120.75495 * 359.97438 * 5 4 2 29 29 H 1.08000 * 120.46916 * 180.28405 * 6 5 4 30 30 H 0.96998 * 120.00452 * 359.97438 * 10 8 7 31 31 H 1.09004 * 109.47041 * 324.99924 * 11 10 8 32 32 H 1.09001 * 109.46989 * 59.99548 * 12 11 10 33 33 H 1.08993 * 109.47194 * 299.99651 * 13 12 11 34 34 H 1.09002 * 109.46695 * 179.97438 * 13 12 11 35 35 H 1.09004 * 109.46733 * 179.97438 * 14 13 12 36 36 H 1.08992 * 109.47554 * 180.02562 * 15 14 13 37 37 H 1.09004 * 109.47108 * 300.00289 * 15 14 13 38 38 H 1.09002 * 109.47097 * 180.02562 * 16 15 14 39 39 H 1.09001 * 109.47375 * 59.99908 * 17 16 15 40 40 H 1.09000 * 109.47140 * 179.97438 * 17 16 15 41 41 H 0.96696 * 114.00485 * 299.99339 * 19 18 17 42 42 H 1.09002 * 109.47153 * 180.02562 * 20 18 17 43 43 H 1.09001 * 109.46832 * 60.00321 * 20 18 17 44 44 H 1.09000 * 109.47486 * 299.99829 * 21 18 17 45 45 H 1.09002 * 109.46716 * 179.97438 * 21 18 17 46 46 H 1.07998 * 119.54671 * 180.02562 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0502 1.7563 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6883 -2.0636 1.4054 6 6 2.1730 -2.6801 2.5486 7 6 2.8739 -1.9200 3.4817 8 6 3.3935 -2.5628 4.7114 9 8 3.2030 -3.7472 4.9049 10 7 4.0772 -1.8337 5.6155 11 6 4.5905 -2.4690 6.8317 12 6 4.7498 -1.4153 7.9294 13 6 5.2852 -2.0790 9.1997 14 6 6.6434 -2.7195 8.9067 15 6 6.4843 -3.7733 7.8091 16 6 5.9487 -3.1096 6.5387 17 6 6.9307 -2.0327 6.0732 18 6 7.0900 -0.9788 7.1710 19 8 8.0067 0.0273 6.7359 20 6 7.6255 -1.6425 8.4413 21 6 5.7318 -0.3383 7.4638 22 7 3.0852 -0.6258 3.2759 23 6 2.6413 -0.0171 2.1980 24 1 -0.3933 0.4417 0.7650 25 1 1.7923 -0.5139 -0.8900 26 1 1.5617 2.4678 -1.2085 27 1 1.5880 2.4585 1.2242 28 1 1.1374 -2.6259 0.6659 29 1 2.0061 -3.7340 2.7151 30 1 4.2295 -0.8883 5.4610 31 1 3.8912 -3.2365 7.1635 32 1 3.7821 -0.9592 8.1384 33 1 4.5856 -2.8461 9.5314 34 1 5.3990 -1.3281 9.9816 35 1 7.0251 -3.1919 9.8119 36 1 7.4517 -4.2299 7.6006 37 1 5.7847 -4.5406 8.1407 38 1 5.8349 -3.8604 5.7568 39 1 7.8984 -2.4890 5.8645 40 1 6.5495 -1.5601 5.1680 41 1 8.8906 -0.3076 6.5317 42 1 7.7385 -0.8918 9.2235 43 1 8.5931 -2.0988 8.2326 44 1 5.3503 0.1346 6.5588 45 1 5.8451 0.4122 8.2462 46 1 2.8330 1.0374 2.0648 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_13287726.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:02:34 Heat of formation + Delta-G solvation = -86.731565 kcal Electronic energy + Delta-G solvation = -29651.606642 eV Core-core repulsion = 25699.555245 eV Total energy + Delta-G solvation = -3952.051397 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.89578 -41.76473 -40.10882 -38.03125 -37.48669 -35.84968 -33.94518 -33.76911 -33.04501 -32.31190 -31.47806 -28.09999 -26.98451 -26.45511 -25.05944 -23.95883 -22.90458 -22.53451 -22.32550 -21.36854 -19.63403 -18.70558 -18.58341 -17.99896 -17.67168 -16.81312 -16.63213 -16.52061 -16.28862 -16.12891 -15.89192 -15.50266 -15.34394 -15.28244 -14.92199 -14.69892 -14.44816 -14.38382 -14.31105 -14.19296 -13.70961 -13.54622 -13.47477 -13.34472 -13.04960 -12.64585 -12.18287 -12.16286 -12.04757 -11.94334 -11.90250 -11.63525 -11.38084 -11.24450 -11.09894 -10.80330 -10.70562 -10.68019 -10.45673 -10.37248 -10.04013 -4.93415 -0.62257 0.05925 1.23070 1.51570 1.57866 1.91868 1.95141 2.63442 2.91230 3.11588 3.32388 3.40654 3.45999 3.48369 3.64526 3.75509 3.79671 3.88237 3.90764 3.96903 4.08197 4.10811 4.15130 4.17273 4.22407 4.26099 4.30255 4.45889 4.56614 4.58354 4.65179 4.68412 4.70002 4.83811 4.92508 4.97078 4.98312 4.99884 5.01352 5.05766 5.10563 5.16211 5.27877 5.31855 5.36242 5.40086 5.46537 5.47319 6.24446 6.40878 6.58570 6.85995 7.00519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.077 4.077 3 Si 0.763 3.237 4 C -0.139 4.139 5 C -0.051 4.051 6 C -0.115 4.115 7 C 0.062 3.938 8 C 0.569 3.431 9 O -0.564 6.564 10 N -0.694 5.694 11 C 0.153 3.847 12 C -0.083 4.083 13 C -0.109 4.109 14 C -0.083 4.083 15 C -0.107 4.107 16 C -0.089 4.089 17 C -0.131 4.131 18 C 0.138 3.862 19 O -0.576 6.576 20 C -0.134 4.134 21 C -0.101 4.101 22 N -0.462 5.462 23 C 0.099 3.901 24 H 0.388 0.612 25 H 0.138 0.862 26 H -0.298 1.298 27 H -0.275 1.275 28 H 0.163 0.837 29 H 0.149 0.851 30 H 0.415 0.585 31 H 0.079 0.921 32 H 0.089 0.911 33 H 0.074 0.926 34 H 0.080 0.920 35 H 0.087 0.913 36 H 0.073 0.927 37 H 0.067 0.933 38 H 0.058 0.942 39 H 0.072 0.928 40 H 0.058 0.942 41 H 0.389 0.611 42 H 0.071 0.929 43 H 0.073 0.927 44 H 0.064 0.936 45 H 0.076 0.924 46 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.853 1.839 0.298 3.407 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.186 4.186 3 Si 0.667 3.333 4 C -0.141 4.141 5 C -0.077 4.077 6 C -0.136 4.136 7 C -0.075 4.075 8 C 0.354 3.646 9 O -0.443 6.443 10 N -0.345 5.345 11 C 0.049 3.951 12 C -0.102 4.102 13 C -0.146 4.146 14 C -0.102 4.102 15 C -0.145 4.145 16 C -0.109 4.109 17 C -0.169 4.169 18 C 0.097 3.903 19 O -0.384 6.384 20 C -0.172 4.172 21 C -0.139 4.139 22 N -0.173 5.173 23 C -0.061 4.061 24 H 0.238 0.762 25 H 0.155 0.845 26 H -0.226 1.226 27 H -0.201 1.201 28 H 0.180 0.820 29 H 0.167 0.833 30 H 0.254 0.746 31 H 0.097 0.903 32 H 0.107 0.893 33 H 0.092 0.908 34 H 0.099 0.901 35 H 0.106 0.894 36 H 0.091 0.909 37 H 0.086 0.914 38 H 0.076 0.924 39 H 0.091 0.909 40 H 0.077 0.923 41 H 0.239 0.761 42 H 0.090 0.910 43 H 0.092 0.908 44 H 0.083 0.917 45 H 0.095 0.905 46 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges 2.567 2.347 0.675 3.543 hybrid contribution -1.113 -0.734 -0.490 1.420 sum 1.455 1.613 0.185 2.180 Atomic orbital electron populations 1.86618 1.17907 1.80351 1.50248 1.25191 0.83739 1.11918 0.97770 0.94064 0.90192 0.71814 0.77207 1.21673 0.98771 0.95514 0.98156 1.21751 0.95431 0.94110 0.96420 1.22283 0.95597 1.02273 0.93439 1.21112 0.99659 0.90869 0.95845 1.18106 0.77883 0.85698 0.82895 1.90782 1.59826 1.16114 1.77547 1.45956 1.53923 1.14057 1.20544 1.21066 0.94866 0.95430 0.83758 1.21294 0.99613 0.94750 0.94575 1.21585 0.96530 1.00502 0.96018 1.21068 0.95268 0.95256 0.98573 1.21557 1.01659 0.97574 0.93742 1.21327 0.94169 0.96991 0.98408 1.22121 0.99858 0.96436 0.98453 1.21051 0.89745 0.86944 0.92521 1.86517 1.25702 1.37238 1.88936 1.22179 0.99126 0.98389 0.97505 1.21446 0.92861 0.97655 1.01925 1.67522 1.18584 1.09098 1.22097 1.23054 0.93739 1.00888 0.88393 0.76237 0.84483 1.22551 1.20096 0.81980 0.83310 0.74626 0.90280 0.89273 0.90774 0.90102 0.89429 0.90853 0.91392 0.92357 0.90922 0.92295 0.76146 0.91048 0.90848 0.91707 0.90519 0.79957 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.76 12.84 -148.98 -1.91 -1.15 16 2 C -0.08 0.37 2.82 71.24 0.20 0.57 16 3 Si 0.76 -4.20 29.90 68.60 2.05 -2.14 16 4 C -0.14 0.38 5.36 -19.69 -0.11 0.28 16 5 C -0.05 0.07 9.83 22.45 0.22 0.29 16 6 C -0.12 -0.32 9.63 22.61 0.22 -0.10 16 7 C 0.06 0.32 6.75 41.89 0.28 0.60 16 8 C 0.57 4.43 7.78 86.88 0.68 5.11 16 9 O -0.56 -7.69 15.99 -3.78 -0.06 -7.75 16 10 N -0.69 -2.33 4.22 -445.10 -1.88 -4.21 16 11 C 0.15 0.29 2.05 44.99 0.09 0.39 16 12 C -0.08 0.13 2.88 -10.79 -0.03 0.10 16 13 C -0.11 0.36 5.19 30.59 0.16 0.52 16 14 C -0.08 0.28 3.19 -10.79 -0.03 0.24 16 15 C -0.11 0.15 5.19 30.59 0.16 0.31 16 16 C -0.09 -0.13 2.88 -10.79 -0.03 -0.16 16 17 C -0.13 -0.02 4.66 30.60 0.14 0.12 16 18 C 0.14 -0.10 1.15 -10.79 -0.01 -0.11 16 19 O -0.58 -0.60 12.98 -148.98 -1.93 -2.54 16 20 C -0.13 0.38 4.82 30.59 0.15 0.52 16 21 C -0.10 0.05 4.67 30.60 0.14 0.20 16 22 N -0.46 -1.26 9.54 -184.91 -1.76 -3.02 16 23 C 0.10 -0.16 9.84 84.83 0.83 0.68 16 24 H 0.39 -2.59 8.70 -74.06 -0.64 -3.24 16 25 H 0.14 -0.97 7.96 -2.39 -0.02 -0.99 16 26 H -0.30 -0.77 7.11 99.48 0.71 -0.06 16 27 H -0.27 0.58 7.01 99.48 0.70 1.28 16 28 H 0.16 -0.75 8.06 -2.91 -0.02 -0.77 16 29 H 0.15 0.42 7.64 -2.91 -0.02 0.40 16 30 H 0.42 0.67 6.20 -92.71 -0.57 0.10 16 31 H 0.08 0.41 7.58 -2.38 -0.02 0.39 16 32 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 33 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 34 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 35 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 36 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 37 H 0.07 -0.06 8.14 -2.38 -0.02 -0.07 16 38 H 0.06 0.34 8.14 -2.39 -0.02 0.32 16 39 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 40 H 0.06 0.17 7.61 -2.39 -0.02 0.15 16 41 H 0.39 -2.16 9.05 -74.06 -0.67 -2.83 16 42 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 43 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 44 H 0.06 0.03 6.51 -2.39 -0.02 0.01 16 45 H 0.08 -0.02 8.14 -2.39 -0.02 -0.04 16 46 H 0.18 -1.16 4.86 -2.91 -0.01 -1.17 16 Total: 0.00 -16.60 352.00 -3.27 -19.87 By element: Atomic # 1 Polarization: -7.78 SS G_CDS: -0.83 Total: -8.61 kcal Atomic # 6 Polarization: 6.48 SS G_CDS: 3.06 Total: 9.54 kcal Atomic # 7 Polarization: -3.59 SS G_CDS: -3.65 Total: -7.23 kcal Atomic # 8 Polarization: -7.53 SS G_CDS: -3.91 Total: -11.43 kcal Atomic # 14 Polarization: -4.20 SS G_CDS: 2.05 Total: -2.14 kcal Total: -16.60 -3.27 -19.87 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_13287726.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.858 kcal (2) G-P(sol) polarization free energy of solvation -16.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.463 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.874 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.732 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds