Wall clock time and date at job start Thu Mar 4 2021 18:02:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.36414 * 125.80139 * 2 1 4 4 C 1.47379 * 127.19189 * 0.02562 * 3 2 1 5 5 O 1.21617 * 119.99954 * 359.70971 * 4 3 2 6 6 N 1.34780 * 119.99987 * 179.71360 * 4 3 2 7 7 C 1.46500 * 119.99944 * 180.02562 * 6 4 3 8 8 C 1.52997 * 109.46927 * 155.00048 * 7 6 4 9 9 C 1.52997 * 109.47457 * 59.99484 * 8 7 6 10 10 C 1.53002 * 109.46817 * 60.00169 * 9 8 7 11 11 C 1.52996 * 109.47346 * 299.99737 * 10 9 8 12 12 C 1.53002 * 109.46891 * 59.99997 * 11 10 9 13 13 C 1.52997 * 109.46978 * 60.00410 * 12 11 10 14 14 C 1.53006 * 109.47164 * 299.99874 * 13 12 11 15 15 O 1.42895 * 109.47000 * 180.02562 * 14 13 12 16 16 C 1.52997 * 109.47127 * 59.99836 * 14 13 12 17 17 C 1.52999 * 109.46623 * 299.99900 * 14 13 12 18 18 C 1.47019 * 105.61453 * 179.75467 * 3 2 1 19 19 C 1.34176 * 105.95681 * 0.22036 * 18 3 2 20 20 C 1.50696 * 125.44259 * 180.02562 * 19 18 3 21 21 O 1.42905 * 109.46757 * 65.00121 * 20 19 18 22 22 Si 1.86296 * 109.47330 * 184.99850 * 20 19 18 23 23 O 1.33655 * 125.79842 * 180.13453 * 2 1 3 24 24 H 1.09001 * 109.46822 * 90.00074 * 1 2 3 25 25 H 1.08996 * 109.46993 * 210.00392 * 1 2 3 26 26 H 1.09001 * 109.46812 * 330.00515 * 1 2 3 27 27 H 0.97001 * 119.99485 * 359.97438 * 6 4 3 28 28 H 1.09000 * 109.47381 * 34.99693 * 7 6 4 29 29 H 1.09001 * 109.46989 * 299.99155 * 8 7 6 30 30 H 1.08993 * 109.47194 * 299.99651 * 9 8 7 31 31 H 1.09002 * 109.46695 * 179.97438 * 9 8 7 32 32 H 1.09004 * 109.46733 * 179.97438 * 10 9 8 33 33 H 1.08992 * 109.47554 * 180.02562 * 11 10 9 34 34 H 1.09004 * 109.47108 * 300.00289 * 11 10 9 35 35 H 1.09002 * 109.47097 * 180.02562 * 12 11 10 36 36 H 1.09001 * 109.47375 * 59.99908 * 13 12 11 37 37 H 1.09000 * 109.47140 * 179.97438 * 13 12 11 38 38 H 0.96696 * 114.00485 * 299.99339 * 15 14 13 39 39 H 1.09002 * 109.47153 * 180.02562 * 16 14 13 40 40 H 1.09001 * 109.46832 * 60.00321 * 16 14 13 41 41 H 1.09000 * 109.47486 * 299.99829 * 17 14 13 42 42 H 1.09002 * 109.46716 * 179.97438 * 17 14 13 43 43 H 1.07997 * 127.02354 * 180.20663 * 18 3 2 44 44 H 1.08994 * 109.46878 * 305.00457 * 20 19 18 45 45 H 0.96702 * 113.99818 * 60.00279 * 21 20 19 46 46 H 1.48506 * 109.99812 * 58.68452 * 22 20 19 47 47 H 1.48500 * 110.00031 * 179.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 0.0005 5 8 0.6890 2.7892 -0.0043 6 7 2.7931 3.5015 0.0063 7 6 2.3646 4.9025 0.0074 8 6 3.4631 5.7713 0.6232 9 6 4.7456 5.6308 -0.1991 10 6 4.4822 6.0846 -1.6363 11 6 3.3837 5.2158 -2.2523 12 6 2.1012 5.3563 -1.4299 13 6 1.6537 6.8193 -1.4288 14 6 2.7522 7.6882 -0.8129 15 8 2.3340 9.0546 -0.8114 16 6 4.0347 7.5478 -1.6352 17 6 3.0155 7.2344 0.6243 18 6 3.6849 0.5991 0.0061 19 6 3.5860 -0.7390 0.0041 20 6 4.7459 -1.7011 0.0092 21 8 5.4695 -1.5682 1.2342 22 14 4.1077 -3.4442 -0.1491 23 8 2.2889 -1.0840 -0.0025 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3633 -0.8899 0.5139 26 1 -0.3633 0.8901 0.5138 27 1 3.7382 3.2834 0.0105 28 1 1.4509 5.0025 0.5932 29 1 3.6507 5.4480 1.6472 30 1 5.0644 4.5885 -0.1998 31 1 5.5280 6.2501 0.2396 32 1 5.3960 5.9850 -2.2220 33 1 3.1963 5.5388 -3.2762 34 1 3.7025 4.1735 -2.2530 35 1 1.3187 4.7370 -1.8684 36 1 1.4660 7.1427 -2.4527 37 1 0.7397 6.9193 -0.8433 38 1 2.1488 9.4103 -1.6913 39 1 4.8174 8.1664 -1.1961 40 1 3.8470 7.8711 -2.6591 41 1 2.1018 7.3345 1.2102 42 1 3.7984 7.8531 1.0630 43 1 4.5928 1.1839 0.0109 44 1 5.4062 -1.4784 -0.8289 45 1 4.9428 -1.7521 2.0241 46 1 3.3263 -3.5870 -1.4038 47 1 5.2420 -4.4026 -0.1460 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_13308374.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:02:55 Heat of formation + Delta-G solvation = -112.592459 kcal Electronic energy + Delta-G solvation = -30612.493163 eV Core-core repulsion = 26534.290214 eV Total energy + Delta-G solvation = -4078.202950 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.166 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -43.78392 -42.84156 -40.25778 -37.99875 -37.61828 -35.41956 -34.22251 -33.78487 -33.22093 -32.96496 -31.10001 -29.37447 -27.04131 -27.01431 -25.61879 -24.19212 -22.82273 -22.69333 -22.53521 -21.62716 -20.72047 -19.05990 -18.63617 -18.02248 -17.91939 -17.68280 -16.85146 -16.75702 -16.20236 -15.93020 -15.89877 -15.73308 -15.42423 -15.23435 -15.01860 -14.90399 -14.43740 -14.34389 -14.20043 -14.18608 -13.96019 -13.83366 -13.59611 -13.55846 -13.40419 -13.04069 -12.88460 -12.76920 -12.56375 -12.25375 -12.07057 -11.98960 -11.85455 -11.40347 -11.27969 -11.13768 -10.95656 -10.85122 -10.60554 -10.43485 -10.06980 -9.59101 -5.00582 0.22106 0.82233 1.16963 1.40204 1.74723 1.90711 2.10390 2.23793 3.12142 3.21891 3.38551 3.41734 3.47595 3.69594 3.76463 3.79022 3.87309 3.94149 4.04422 4.09297 4.12287 4.15413 4.20422 4.22760 4.31030 4.35676 4.44815 4.53062 4.57354 4.58635 4.64700 4.67054 4.74512 4.78398 4.85211 4.97877 4.97985 4.99769 5.01240 5.08601 5.11996 5.13190 5.20308 5.27714 5.32657 5.36931 5.44551 5.49603 5.88799 6.46756 6.61985 6.83137 7.14786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.086 3.914 3 C -0.269 4.269 4 C 0.589 3.411 5 O -0.573 6.573 6 N -0.703 5.703 7 C 0.160 3.840 8 C -0.082 4.082 9 C -0.112 4.112 10 C -0.081 4.081 11 C -0.106 4.106 12 C -0.088 4.088 13 C -0.133 4.133 14 C 0.135 3.865 15 O -0.578 6.578 16 C -0.134 4.134 17 C -0.098 4.098 18 C -0.148 4.148 19 C -0.059 4.059 20 C -0.022 4.022 21 O -0.539 6.539 22 Si 0.774 3.226 23 O -0.171 6.171 24 H 0.094 0.906 25 H 0.102 0.898 26 H 0.097 0.903 27 H 0.410 0.590 28 H 0.068 0.932 29 H 0.091 0.909 30 H 0.076 0.924 31 H 0.080 0.920 32 H 0.087 0.913 33 H 0.065 0.935 34 H 0.065 0.935 35 H 0.056 0.944 36 H 0.076 0.924 37 H 0.058 0.942 38 H 0.390 0.610 39 H 0.071 0.929 40 H 0.072 0.928 41 H 0.061 0.939 42 H 0.078 0.922 43 H 0.176 0.824 44 H 0.140 0.860 45 H 0.400 0.600 46 H -0.296 1.296 47 H -0.279 1.279 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.184 -1.546 0.354 3.557 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.032 3.968 3 C -0.273 4.273 4 C 0.378 3.622 5 O -0.455 6.455 6 N -0.354 5.354 7 C 0.056 3.944 8 C -0.101 4.101 9 C -0.149 4.149 10 C -0.099 4.099 11 C -0.143 4.143 12 C -0.108 4.108 13 C -0.171 4.171 14 C 0.095 3.905 15 O -0.386 6.386 16 C -0.171 4.171 17 C -0.137 4.137 18 C -0.167 4.167 19 C -0.107 4.107 20 C -0.133 4.133 21 O -0.348 6.348 22 Si 0.679 3.321 23 O -0.068 6.068 24 H 0.113 0.887 25 H 0.120 0.880 26 H 0.115 0.885 27 H 0.248 0.752 28 H 0.086 0.914 29 H 0.109 0.891 30 H 0.095 0.905 31 H 0.099 0.901 32 H 0.105 0.895 33 H 0.084 0.916 34 H 0.084 0.916 35 H 0.074 0.926 36 H 0.094 0.906 37 H 0.077 0.923 38 H 0.239 0.761 39 H 0.090 0.910 40 H 0.090 0.910 41 H 0.079 0.921 42 H 0.097 0.903 43 H 0.193 0.807 44 H 0.157 0.843 45 H 0.250 0.750 46 H -0.223 1.223 47 H -0.205 1.205 Dipole moment (debyes) X Y Z Total from point charges 2.848 -2.297 0.134 3.661 hybrid contribution 0.215 0.753 -1.031 1.295 sum 3.062 -1.543 -0.897 3.545 Atomic orbital electron populations 1.20703 0.82648 1.05708 1.05020 1.23212 0.94747 0.83011 0.95834 1.21211 0.94255 0.93450 1.18383 1.17380 0.85235 0.84407 0.75155 1.90759 1.17945 1.84522 1.52261 1.45752 1.09966 1.05215 1.74485 1.20877 0.97837 0.79624 0.96102 1.21257 0.94773 0.93618 1.00464 1.21641 0.96376 1.02337 0.94555 1.21045 0.98512 0.93744 0.96649 1.21527 0.93965 1.00128 0.98682 1.21292 0.98132 0.95708 0.95665 1.22139 0.98550 0.94638 1.01798 1.21110 0.92730 0.80936 0.95750 1.86520 1.89794 1.26534 1.35768 1.22169 0.97298 0.97223 1.00439 1.21390 1.02121 0.95163 0.94980 1.22780 0.96356 0.93683 1.03907 1.22911 0.82891 0.96010 1.08925 1.24449 0.90315 1.07056 0.91466 1.86535 1.39620 1.93123 1.15490 0.93261 0.79776 0.72990 0.86080 1.83675 1.16746 1.34920 1.71438 0.88713 0.87952 0.88482 0.75184 0.91406 0.89072 0.90533 0.90138 0.89478 0.91589 0.91616 0.92565 0.90572 0.92320 0.76079 0.90985 0.90967 0.92061 0.90317 0.80655 0.84279 0.74956 1.22320 1.20539 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.03 9.89 71.24 0.70 0.67 16 2 C 0.09 0.29 7.37 25.26 0.19 0.48 16 3 C -0.27 -1.04 6.31 -18.99 -0.12 -1.16 16 4 C 0.59 3.66 7.78 86.65 0.67 4.34 16 5 O -0.57 -7.25 14.51 -4.09 -0.06 -7.31 16 6 N -0.70 -0.37 4.23 -445.83 -1.89 -2.26 16 7 C 0.16 0.22 2.05 44.99 0.09 0.32 16 8 C -0.08 0.19 2.88 -10.79 -0.03 0.16 16 9 C -0.11 0.59 5.02 30.59 0.15 0.75 16 10 C -0.08 0.34 3.19 -10.79 -0.03 0.31 16 11 C -0.11 0.21 5.04 30.59 0.15 0.36 16 12 C -0.09 -0.13 2.87 -10.79 -0.03 -0.16 16 13 C -0.13 -0.14 4.81 30.60 0.15 0.00 16 14 C 0.13 0.02 1.15 -10.79 -0.01 0.01 16 15 O -0.58 -1.35 12.98 -148.98 -1.93 -3.28 16 16 C -0.13 0.37 4.82 30.59 0.15 0.52 16 17 C -0.10 -0.05 4.84 30.60 0.15 0.10 16 18 C -0.15 0.05 10.48 23.65 0.25 0.29 16 19 C -0.06 0.02 6.18 24.76 0.15 0.18 16 20 C -0.02 0.08 2.97 71.23 0.21 0.29 16 21 O -0.54 2.11 12.88 -148.98 -1.92 0.19 16 22 Si 0.77 -2.24 32.09 68.60 2.20 -0.04 16 23 O -0.17 -0.30 8.90 4.37 0.04 -0.26 16 24 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 25 H 0.10 -0.42 8.14 -2.39 -0.02 -0.44 16 26 H 0.10 0.36 6.49 -2.39 -0.02 0.35 16 27 H 0.41 -1.70 6.04 -92.71 -0.56 -2.26 16 28 H 0.07 0.44 7.58 -2.39 -0.02 0.43 16 29 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 30 H 0.08 -0.59 6.51 -2.39 -0.02 -0.60 16 31 H 0.08 -0.49 8.14 -2.39 -0.02 -0.50 16 32 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 33 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 34 H 0.07 -0.12 7.60 -2.38 -0.02 -0.14 16 35 H 0.06 0.36 8.14 -2.39 -0.02 0.34 16 36 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 37 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 38 H 0.39 -1.79 9.05 -74.06 -0.67 -2.46 16 39 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 40 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 41 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 42 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 43 H 0.18 -0.89 7.74 -2.91 -0.02 -0.91 16 44 H 0.14 -0.67 7.96 -2.39 -0.02 -0.68 16 45 H 0.40 -4.45 8.70 -74.06 -0.64 -5.10 16 46 H -0.30 -1.28 7.11 99.48 0.71 -0.57 16 47 H -0.28 -0.70 7.11 99.48 0.71 0.01 16 Total: 0.00 -17.68 360.98 -1.59 -19.26 By element: Atomic # 1 Polarization: -12.92 SS G_CDS: -0.82 Total: -13.74 kcal Atomic # 6 Polarization: 4.65 SS G_CDS: 2.79 Total: 7.44 kcal Atomic # 7 Polarization: -0.37 SS G_CDS: -1.89 Total: -2.26 kcal Atomic # 8 Polarization: -6.79 SS G_CDS: -3.87 Total: -10.67 kcal Atomic # 14 Polarization: -2.24 SS G_CDS: 2.20 Total: -0.04 kcal Total: -17.68 -1.59 -19.26 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_13308374.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.331 kcal (2) G-P(sol) polarization free energy of solvation -17.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.006 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.262 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.592 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds