Wall clock time and date at job start Thu Mar 4 2021 18:03:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37782 * 119.84927 * 2 1 4 4 C 1.39704 * 119.91225 * 179.97438 * 3 2 1 5 5 C 1.47535 * 120.19779 * 179.97438 * 4 3 2 6 6 O 1.21589 * 120.00358 * 180.02562 * 5 4 3 7 7 N 1.34780 * 119.99818 * 0.02562 * 5 4 3 8 8 C 1.46500 * 119.99944 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.46927 * 155.00048 * 8 7 5 10 10 C 1.52997 * 109.47457 * 59.99484 * 9 8 7 11 11 C 1.53002 * 109.46817 * 60.00169 * 10 9 8 12 12 C 1.52996 * 109.47346 * 299.99737 * 11 10 9 13 13 C 1.53002 * 109.46891 * 59.99997 * 12 11 10 14 14 C 1.52997 * 109.46978 * 60.00410 * 13 12 11 15 15 C 1.53006 * 109.47164 * 299.99874 * 14 13 12 16 16 O 1.42895 * 109.47000 * 180.02562 * 15 14 13 17 17 C 1.52997 * 109.47127 * 59.99836 * 15 14 13 18 18 C 1.52999 * 109.46623 * 299.99900 * 15 14 13 19 19 C 1.40146 * 119.61672 * 0.25292 * 4 3 2 20 20 O 1.35644 * 120.15317 * 179.72060 * 19 4 3 21 21 C 1.38715 * 119.69463 * 359.49484 * 19 4 3 22 22 C 1.50695 * 119.95917 * 180.23074 * 21 19 4 23 23 O 1.42898 * 109.47382 * 75.27418 * 22 21 19 24 24 Si 1.86296 * 109.47268 * 195.27850 * 22 21 19 25 25 C 1.38055 * 120.08134 * 0.50651 * 21 19 4 26 26 H 1.08997 * 109.47094 * 90.00312 * 1 2 3 27 27 H 1.09000 * 109.46979 * 209.99928 * 1 2 3 28 28 H 1.08998 * 109.47259 * 330.00182 * 1 2 3 29 29 H 1.08004 * 120.04629 * 0.02562 * 3 2 1 30 30 H 0.97001 * 119.99485 * 359.97438 * 7 5 4 31 31 H 1.09000 * 109.47381 * 34.99693 * 8 7 5 32 32 H 1.09001 * 109.46989 * 299.99155 * 9 8 7 33 33 H 1.08993 * 109.47194 * 299.99651 * 10 9 8 34 34 H 1.09002 * 109.46695 * 179.97438 * 10 9 8 35 35 H 1.09004 * 109.46733 * 179.97438 * 11 10 9 36 36 H 1.08992 * 109.47554 * 180.02562 * 12 11 10 37 37 H 1.09004 * 109.47108 * 300.00289 * 12 11 10 38 38 H 1.09002 * 109.47097 * 180.02562 * 13 12 11 39 39 H 1.09001 * 109.47375 * 59.99908 * 14 13 12 40 40 H 1.09000 * 109.47140 * 179.97438 * 14 13 12 41 41 H 0.96696 * 114.00485 * 299.99339 * 16 15 14 42 42 H 1.09002 * 109.47153 * 180.02562 * 17 15 14 43 43 H 1.09001 * 109.46832 * 60.00321 * 17 15 14 44 44 H 1.09000 * 109.47486 * 299.99829 * 18 15 14 45 45 H 1.09002 * 109.46716 * 179.97438 * 18 15 14 46 46 H 0.96703 * 114.00076 * 90.00577 * 20 19 4 47 47 H 1.09004 * 109.46731 * 315.27368 * 22 21 19 48 48 H 0.96705 * 113.99911 * 60.00194 * 23 22 21 49 49 H 1.48501 * 110.00227 * 179.97438 * 24 22 21 50 50 H 1.48499 * 109.99797 * 301.31862 * 24 22 21 51 51 H 1.08005 * 119.80090 * 179.76621 * 25 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1927 1.1950 0.0000 4 6 3.5898 1.1966 0.0005 5 6 4.3305 2.4725 0.0000 6 8 5.5464 2.4697 0.0000 7 7 3.6593 3.6413 -0.0005 8 6 4.3947 4.9083 -0.0017 9 6 3.5198 6.0053 -0.6117 10 6 2.2421 6.1579 0.2160 11 6 2.6074 6.5368 1.6526 12 6 3.4822 5.4399 2.2627 13 6 4.7599 5.2872 1.4350 14 6 5.5280 6.6105 1.4339 15 6 4.6531 7.7075 0.8238 16 8 5.3707 8.9432 0.8223 17 6 3.3754 7.8601 1.6515 18 6 4.2880 7.3285 -0.6128 19 6 4.2837 -0.0210 -0.0043 20 8 5.6401 -0.0322 -0.0095 21 6 3.5771 -1.2147 0.0011 22 6 4.3173 -2.5273 0.0012 23 8 4.8545 -2.7712 1.3026 24 14 3.1446 -3.9015 -0.4542 25 6 2.1966 -1.2016 0.0005 26 1 -0.3633 -0.0001 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3634 0.8900 0.5138 29 1 1.6510 2.1294 0.0004 30 1 2.6893 3.6435 -0.0009 31 1 5.3050 4.7996 -0.5913 32 1 3.2597 5.7353 -1.6352 33 1 1.6950 5.2152 0.2167 34 1 1.6191 6.9397 -0.2185 35 1 1.6970 6.6460 2.2421 36 1 3.7420 5.7096 3.2863 37 1 2.9350 4.4972 2.2635 38 1 5.3830 4.5054 1.8694 39 1 5.7882 6.8804 2.4574 40 1 6.4384 6.5016 0.8446 41 1 5.6353 9.2455 1.7018 42 1 2.7519 8.6413 1.2166 43 1 3.6356 8.1301 2.6750 44 1 5.1982 7.2198 -1.2025 45 1 3.6643 8.1098 -1.0473 46 1 6.0368 -0.0371 0.8723 47 1 5.1289 -2.4868 -0.7253 48 1 4.1872 -2.8199 2.0008 49 1 3.8626 -5.2014 -0.4582 50 1 2.0164 -3.9468 0.5104 51 1 1.6510 -2.1337 0.0009 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_13422088.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:03:07 Heat of formation + Delta-G solvation = -143.194394 kcal Electronic energy + Delta-G solvation = -34443.647719 eV Core-core repulsion = 30080.354011 eV Total energy + Delta-G solvation = -4363.293709 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.182 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -42.90506 -41.60255 -39.91513 -38.08013 -37.83951 -37.53096 -35.39409 -33.78568 -33.52196 -33.05784 -32.61179 -30.88455 -27.56118 -27.01634 -27.00952 -26.72230 -24.80926 -22.82754 -22.58171 -22.43576 -21.99224 -21.08418 -19.74877 -18.94790 -18.38698 -18.22613 -17.71315 -17.32766 -16.93554 -16.52945 -16.20744 -16.06221 -15.91772 -15.76829 -15.44931 -15.24281 -15.20180 -15.06628 -14.87617 -14.45352 -14.35719 -14.33133 -14.16080 -13.62517 -13.59628 -13.53361 -13.40793 -13.31421 -13.06581 -12.92010 -12.60820 -12.51454 -12.23545 -12.06599 -11.98554 -11.85972 -11.83455 -11.71421 -11.39634 -11.25605 -11.04286 -10.86908 -10.55925 -10.43411 -10.23045 -9.98786 -9.50636 -4.94512 -0.35294 0.06144 1.24559 1.52733 1.70876 1.91076 2.01824 2.53866 3.11658 3.18085 3.35944 3.38497 3.41811 3.50050 3.55995 3.75972 3.79308 3.86149 3.94251 4.04419 4.09597 4.12455 4.15566 4.17180 4.20579 4.23427 4.36771 4.38418 4.53302 4.55815 4.58966 4.61536 4.66768 4.75207 4.81804 4.84016 4.91644 4.97049 4.97716 4.98300 5.00495 5.02233 5.09884 5.13029 5.18416 5.25206 5.28736 5.32319 5.36064 5.42140 5.45278 5.49096 5.67583 6.44532 6.45650 6.67637 6.82459 7.15078 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.092 4.092 3 C -0.061 4.061 4 C -0.179 4.179 5 C 0.555 3.445 6 O -0.564 6.564 7 N -0.704 5.704 8 C 0.160 3.840 9 C -0.083 4.083 10 C -0.111 4.111 11 C -0.081 4.081 12 C -0.105 4.105 13 C -0.088 4.088 14 C -0.134 4.134 15 C 0.135 3.865 16 O -0.579 6.579 17 C -0.133 4.133 18 C -0.099 4.099 19 C 0.162 3.838 20 O -0.493 6.493 21 C -0.152 4.152 22 C -0.085 4.085 23 O -0.547 6.547 24 Si 0.779 3.221 25 C -0.080 4.080 26 H 0.088 0.912 27 H 0.077 0.923 28 H 0.083 0.917 29 H 0.159 0.841 30 H 0.411 0.589 31 H 0.060 0.940 32 H 0.092 0.908 33 H 0.082 0.918 34 H 0.083 0.917 35 H 0.092 0.908 36 H 0.065 0.935 37 H 0.070 0.930 38 H 0.052 0.948 39 H 0.076 0.924 40 H 0.053 0.947 41 H 0.390 0.610 42 H 0.073 0.927 43 H 0.071 0.929 44 H 0.056 0.944 45 H 0.080 0.920 46 H 0.400 0.600 47 H 0.107 0.893 48 H 0.386 0.614 49 H -0.305 1.305 50 H -0.259 1.259 51 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.129 0.853 1.471 11.258 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.092 4.092 3 C -0.079 4.079 4 C -0.182 4.182 5 C 0.344 3.656 6 O -0.444 6.444 7 N -0.357 5.357 8 C 0.055 3.945 9 C -0.102 4.102 10 C -0.148 4.148 11 C -0.099 4.099 12 C -0.142 4.142 13 C -0.108 4.108 14 C -0.173 4.173 15 C 0.094 3.906 16 O -0.387 6.387 17 C -0.171 4.171 18 C -0.137 4.137 19 C 0.115 3.885 20 O -0.305 6.305 21 C -0.153 4.153 22 C -0.193 4.193 23 O -0.355 6.355 24 Si 0.682 3.318 25 C -0.098 4.098 26 H 0.107 0.893 27 H 0.096 0.904 28 H 0.102 0.898 29 H 0.176 0.824 30 H 0.251 0.749 31 H 0.078 0.922 32 H 0.110 0.890 33 H 0.100 0.900 34 H 0.101 0.899 35 H 0.110 0.890 36 H 0.084 0.916 37 H 0.089 0.911 38 H 0.071 0.929 39 H 0.094 0.906 40 H 0.072 0.928 41 H 0.239 0.761 42 H 0.092 0.908 43 H 0.090 0.910 44 H 0.075 0.925 45 H 0.099 0.901 46 H 0.259 0.741 47 H 0.125 0.875 48 H 0.235 0.765 49 H -0.233 1.233 50 H -0.184 1.184 51 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -10.238 0.102 0.152 10.240 hybrid contribution 1.033 0.244 2.241 2.480 sum -9.205 0.347 2.393 9.517 Atomic orbital electron populations 1.20925 0.87923 1.04444 1.04079 1.20111 0.98128 0.91661 0.99263 1.21405 0.90873 0.99867 0.95778 1.20414 0.95100 0.92434 1.10275 1.18354 0.86927 0.84397 0.75942 1.90813 1.15076 1.87903 1.50570 1.45840 1.10764 1.04373 1.74717 1.20848 0.94996 0.82558 0.96089 1.21273 0.95591 0.92699 1.00613 1.21656 0.95745 1.03074 0.94364 1.21060 0.98543 0.93548 0.96780 1.21536 0.94850 0.99291 0.98565 1.21284 0.97442 0.96394 0.95672 1.22148 0.98386 0.94990 1.01731 1.21123 0.90703 0.82940 0.95793 1.86521 1.76766 1.39607 1.35819 1.22168 0.96310 0.98311 1.00313 1.21396 1.00414 0.96962 0.94959 1.18571 0.83496 0.90900 0.95512 1.84661 1.15529 1.96078 1.34202 1.20627 0.94629 0.94931 1.05095 1.25263 1.05989 1.00195 0.87863 1.86605 1.38087 1.93641 1.17150 0.93825 0.76073 0.73068 0.88852 1.21417 0.92147 0.99814 0.96420 0.89333 0.90429 0.89764 0.82387 0.74927 0.92213 0.89005 0.89989 0.89887 0.88979 0.91581 0.91142 0.92938 0.90580 0.92826 0.76095 0.90841 0.90988 0.92511 0.90129 0.74088 0.87504 0.76482 1.23300 1.18445 0.82814 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.27 10.00 71.24 0.71 1.98 16 2 C -0.09 0.50 5.87 -19.90 -0.12 0.38 16 3 C -0.06 0.25 9.18 22.52 0.21 0.45 16 4 C -0.18 -0.62 5.89 -20.01 -0.12 -0.74 16 5 C 0.56 3.88 7.73 86.69 0.67 4.55 16 6 O -0.56 -9.09 14.82 16.92 0.25 -8.84 16 7 N -0.70 0.20 4.18 -445.70 -1.86 -1.66 16 8 C 0.16 0.26 2.05 44.99 0.09 0.35 16 9 C -0.08 0.24 2.88 -10.79 -0.03 0.21 16 10 C -0.11 0.80 5.02 30.59 0.15 0.95 16 11 C -0.08 0.48 3.19 -10.79 -0.03 0.44 16 12 C -0.10 0.35 5.04 30.59 0.15 0.50 16 13 C -0.09 -0.13 2.87 -10.79 -0.03 -0.16 16 14 C -0.13 -0.22 4.81 30.60 0.15 -0.07 16 15 C 0.13 0.02 1.15 -10.79 -0.01 0.01 16 16 O -0.58 -1.51 12.98 -148.98 -1.93 -3.44 16 17 C -0.13 0.49 4.82 30.59 0.15 0.63 16 18 C -0.10 -0.05 4.84 30.60 0.15 0.10 16 19 C 0.16 1.00 6.69 22.85 0.15 1.15 16 20 O -0.49 -5.21 10.90 -68.67 -0.75 -5.96 16 21 C -0.15 -0.20 5.27 -19.80 -0.10 -0.30 16 22 C -0.09 -0.13 2.38 71.23 0.17 0.04 16 23 O -0.55 -1.87 12.88 -148.98 -1.92 -3.79 16 24 Si 0.78 -2.12 30.24 68.60 2.07 -0.04 16 25 C -0.08 0.28 8.30 22.30 0.19 0.47 16 26 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 27 H 0.08 -0.88 8.08 -2.39 -0.02 -0.90 16 28 H 0.08 -1.08 8.08 -2.39 -0.02 -1.10 16 29 H 0.16 -1.70 6.40 -2.91 -0.02 -1.72 16 30 H 0.41 -2.80 4.90 -92.71 -0.45 -3.26 16 31 H 0.06 0.50 7.58 -2.39 -0.02 0.48 16 32 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 33 H 0.08 -0.89 6.51 -2.39 -0.02 -0.90 16 34 H 0.08 -0.67 8.14 -2.39 -0.02 -0.69 16 35 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 36 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 37 H 0.07 -0.30 7.60 -2.38 -0.02 -0.32 16 38 H 0.05 0.36 8.14 -2.39 -0.02 0.34 16 39 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 40 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 41 H 0.39 -1.70 9.05 -74.06 -0.67 -2.37 16 42 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 43 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 44 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 45 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 46 H 0.40 2.58 9.06 -74.06 -0.67 1.91 16 47 H 0.11 0.45 7.82 -2.39 -0.02 0.43 16 48 H 0.39 -1.38 8.70 -74.05 -0.64 -2.02 16 49 H -0.30 -1.75 7.11 99.48 0.71 -1.04 16 50 H -0.26 0.67 6.68 99.48 0.66 1.33 16 51 H 0.15 -1.16 4.83 -2.91 -0.01 -1.17 16 Total: 0.00 -23.34 384.10 -3.09 -26.43 By element: Atomic # 1 Polarization: -12.18 SS G_CDS: -1.44 Total: -13.63 kcal Atomic # 6 Polarization: 8.44 SS G_CDS: 2.49 Total: 10.93 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -1.86 Total: -1.66 kcal Atomic # 8 Polarization: -17.67 SS G_CDS: -4.35 Total: -22.02 kcal Atomic # 14 Polarization: -2.12 SS G_CDS: 2.07 Total: -0.04 kcal Total: -23.34 -3.09 -26.43 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_13422088.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.767 kcal (2) G-P(sol) polarization free energy of solvation -23.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.091 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.427 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.194 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds