Wall clock time and date at job start Thu Mar 4 2021 18:03:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46906 * 110.99726 * 2 1 4 4 C 1.39045 * 111.00502 * 123.95564 * 2 1 3 5 5 C 1.39196 * 119.93411 * 120.02238 * 4 2 1 6 6 C 1.50689 * 119.96533 * 0.02562 * 5 4 2 7 7 O 1.42902 * 109.47099 * 75.00091 * 6 5 4 8 8 Si 1.86298 * 109.47452 * 194.99892 * 6 5 4 9 9 C 1.37633 * 120.06640 * 179.76793 * 5 4 2 10 10 C 1.39776 * 119.93264 * 0.44363 * 9 5 4 11 11 C 1.47518 * 120.06706 * 179.81173 * 10 9 5 12 12 O 1.21595 * 120.00284 * 359.72528 * 11 10 9 13 13 N 1.34778 * 119.99935 * 179.72325 * 11 10 9 14 14 C 1.46499 * 120.00288 * 180.02562 * 13 11 10 15 15 C 1.52997 * 109.47012 * 274.99862 * 14 13 11 16 16 C 1.52999 * 109.47592 * 300.00038 * 15 14 13 17 17 C 1.53006 * 109.46626 * 300.00035 * 16 15 14 18 18 C 1.52997 * 109.47164 * 59.99702 * 17 16 15 19 19 C 1.52996 * 109.47369 * 154.99725 * 14 13 11 20 20 C 1.52997 * 109.47131 * 179.97438 * 19 14 13 21 21 C 1.52997 * 109.47232 * 300.00126 * 20 19 14 22 22 O 1.42911 * 109.47126 * 180.02562 * 21 20 19 23 23 C 1.52997 * 109.47127 * 299.99539 * 17 16 15 24 24 C 1.52996 * 109.47165 * 59.99895 * 21 20 19 25 25 C 1.39812 * 119.86079 * 359.53429 * 10 9 5 26 26 C 1.37590 * 119.93167 * 0.25560 * 25 10 9 27 27 H 1.08994 * 109.47122 * 296.04440 * 1 2 3 28 28 H 1.08998 * 109.47050 * 56.04893 * 1 2 3 29 29 H 1.09006 * 109.46576 * 176.04668 * 1 2 3 30 30 H 1.09000 * 109.46937 * 183.95285 * 3 2 1 31 31 H 1.09005 * 109.47012 * 303.95429 * 3 2 1 32 32 H 1.08996 * 109.47069 * 63.95619 * 3 2 1 33 33 H 1.09003 * 109.47572 * 315.00034 * 6 5 4 34 34 H 0.96697 * 114.00091 * 59.99626 * 7 6 5 35 35 H 1.48498 * 110.00405 * 180.02562 * 8 6 5 36 36 H 1.48504 * 110.00079 * 301.32523 * 8 6 5 37 37 H 1.08005 * 120.03259 * 180.22875 * 9 5 4 38 38 H 0.97007 * 119.99934 * 359.97438 * 13 11 10 39 39 H 1.09001 * 109.46813 * 34.99915 * 14 13 11 40 40 H 1.09002 * 109.47045 * 59.99785 * 15 14 13 41 41 H 1.08993 * 109.47839 * 180.02562 * 16 15 14 42 42 H 1.09000 * 109.47160 * 59.99666 * 16 15 14 43 43 H 1.09001 * 109.46998 * 179.97438 * 17 16 15 44 44 H 1.09000 * 109.47140 * 60.00051 * 18 17 16 45 45 H 1.09001 * 109.47230 * 179.97438 * 18 17 16 46 46 H 1.08992 * 109.47534 * 300.00357 * 19 14 13 47 47 H 1.08998 * 109.47533 * 60.00505 * 20 19 14 48 48 H 1.09002 * 109.47153 * 180.02562 * 20 19 14 49 49 H 0.96699 * 113.99606 * 59.99878 * 22 21 20 50 50 H 1.09002 * 109.47153 * 180.02562 * 23 17 16 51 51 H 1.08996 * 109.46952 * 300.00302 * 23 17 16 52 52 H 1.09000 * 109.47380 * 179.97438 * 24 21 20 53 53 H 1.09001 * 109.46993 * 60.00298 * 24 21 20 54 54 H 1.08002 * 120.03445 * 180.27536 * 25 10 9 55 55 H 1.08001 * 119.96688 * 179.97438 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.9674 -0.7250 1.0767 5 6 2.7798 -1.8327 0.8517 6 6 3.1183 -2.2440 -0.5579 7 8 4.0876 -1.3429 -1.0972 8 14 3.8137 -3.9723 -0.5506 9 6 3.2786 -2.5495 1.9156 10 6 2.9609 -2.1697 3.2227 11 6 3.4905 -2.9383 4.3651 12 8 4.2000 -3.9063 4.1700 13 7 3.1879 -2.5675 5.6250 14 6 3.7142 -3.3305 6.7595 15 6 2.7947 -4.5195 7.0450 16 6 1.3913 -4.0103 7.3799 17 6 1.4572 -3.1087 8.6143 18 6 2.3767 -1.9196 8.3289 19 6 3.7800 -2.4289 7.9939 20 6 4.3291 -3.2259 9.1789 21 6 3.4091 -4.4146 9.4641 22 8 3.9217 -5.1588 10.5713 23 6 2.0068 -3.9055 9.7991 24 6 3.3433 -5.3162 8.2297 25 6 2.1450 -1.0563 3.4453 26 6 1.6531 -0.3413 2.3778 27 1 -0.3633 0.4512 0.9233 28 1 -0.3633 0.5739 -0.8525 29 1 -0.3633 -1.0253 -0.0709 30 1 3.0827 1.3433 -0.0708 31 1 1.5897 1.9164 -0.8525 32 1 1.7044 1.8724 0.9233 33 1 2.2172 -2.2175 -1.1705 34 1 4.9171 -1.3146 -0.6012 35 1 4.1522 -4.3895 -1.9349 36 1 5.0248 -4.0289 0.3070 37 1 3.9119 -3.4067 1.7405 38 1 2.6222 -1.7950 5.7807 39 1 4.7139 -3.6933 6.5209 40 1 2.7478 -5.1619 6.1655 41 1 0.7364 -4.8574 7.5837 42 1 0.9997 -3.4426 6.5358 43 1 0.4575 -2.7455 8.8527 44 1 1.9851 -1.3519 7.4848 45 1 2.4232 -1.2771 9.2081 46 1 4.4350 -1.5818 7.7906 47 1 5.3288 -3.5891 8.9406 48 1 4.3756 -2.5837 10.0584 49 1 3.9907 -4.6485 11.3898 50 1 2.0533 -3.2633 10.6787 51 1 1.3518 -4.7526 10.0024 52 1 2.6882 -6.1634 8.4330 53 1 4.3429 -5.6795 7.9914 54 1 1.9015 -0.7577 4.4543 55 1 1.0225 0.5186 2.5491 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_13422196.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:03:12 Heat of formation + Delta-G solvation = -78.842197 kcal Electronic energy + Delta-G solvation = -36278.828936 eV Core-core repulsion = 31860.506792 eV Total energy + Delta-G solvation = -4418.322145 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.209 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -42.89205 -41.56626 -40.23990 -37.94658 -37.65594 -37.22118 -35.47333 -33.76931 -33.36181 -32.71366 -31.58444 -30.68849 -28.50540 -27.15835 -26.99617 -26.90435 -25.62297 -23.49657 -22.88551 -22.72401 -22.53095 -22.11073 -21.01542 -19.52997 -18.55416 -18.04156 -17.93211 -17.65736 -17.16100 -16.49919 -16.40310 -16.24763 -16.04457 -15.88265 -15.68511 -15.53827 -15.40615 -15.23922 -15.06398 -14.86444 -14.70539 -14.47578 -14.37683 -14.16018 -13.98114 -13.59986 -13.53661 -13.49032 -13.33493 -13.12469 -13.01207 -12.98468 -12.66040 -12.60470 -12.51846 -12.18604 -12.06154 -11.95899 -11.86197 -11.77944 -11.52332 -11.25843 -11.07586 -10.76557 -10.58167 -10.45910 -10.14475 -10.11377 -9.76007 -9.48004 -5.00247 -0.37719 0.15117 1.25860 1.52278 1.65448 1.86819 1.99545 2.62853 2.81754 3.15064 3.37533 3.43744 3.44169 3.56464 3.63924 3.78418 3.79378 3.89208 3.96603 4.04507 4.08837 4.12477 4.15202 4.16944 4.22878 4.25112 4.26208 4.38361 4.39957 4.46499 4.54152 4.55856 4.60435 4.62718 4.68677 4.70022 4.77103 4.79797 4.86093 4.98264 4.99158 5.00341 5.01098 5.02159 5.05487 5.05701 5.11924 5.13828 5.15453 5.26313 5.29939 5.33549 5.37428 5.48069 5.49685 5.56671 5.88207 6.31076 6.43356 6.50143 6.87459 7.11290 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.523 5.523 3 C 0.033 3.967 4 C 0.141 3.859 5 C -0.110 4.110 6 C -0.046 4.046 7 O -0.533 6.533 8 Si 0.734 3.266 9 C -0.068 4.068 10 C -0.147 4.147 11 C 0.558 3.442 12 O -0.578 6.578 13 N -0.701 5.701 14 C 0.158 3.842 15 C -0.087 4.087 16 C -0.107 4.107 17 C -0.081 4.081 18 C -0.109 4.109 19 C -0.084 4.084 20 C -0.133 4.133 21 C 0.134 3.866 22 O -0.581 6.581 23 C -0.134 4.134 24 C -0.100 4.100 25 C -0.055 4.055 26 C -0.154 4.154 27 H 0.044 0.956 28 H 0.081 0.919 29 H 0.072 0.928 30 H 0.060 0.940 31 H 0.080 0.920 32 H 0.042 0.958 33 H 0.126 0.874 34 H 0.379 0.621 35 H -0.293 1.293 36 H -0.294 1.294 37 H 0.128 0.872 38 H 0.413 0.587 39 H 0.063 0.937 40 H 0.058 0.942 41 H 0.061 0.939 42 H 0.074 0.926 43 H 0.090 0.910 44 H 0.080 0.920 45 H 0.085 0.915 46 H 0.091 0.909 47 H 0.059 0.941 48 H 0.091 0.909 49 H 0.391 0.609 50 H 0.081 0.919 51 H 0.061 0.939 52 H 0.064 0.936 53 H 0.052 0.948 54 H 0.159 0.841 55 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.705 7.231 4.786 10.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.244 5.244 3 C -0.113 4.113 4 C 0.046 3.954 5 C -0.111 4.111 6 C -0.157 4.157 7 O -0.339 6.339 8 Si 0.641 3.359 9 C -0.087 4.087 10 C -0.150 4.150 11 C 0.346 3.654 12 O -0.459 6.459 13 N -0.353 5.353 14 C 0.053 3.947 15 C -0.107 4.107 16 C -0.145 4.145 17 C -0.100 4.100 18 C -0.147 4.147 19 C -0.103 4.103 20 C -0.171 4.171 21 C 0.094 3.906 22 O -0.390 6.390 23 C -0.172 4.172 24 C -0.138 4.138 25 C -0.074 4.074 26 C -0.174 4.174 27 H 0.062 0.938 28 H 0.100 0.900 29 H 0.090 0.910 30 H 0.079 0.921 31 H 0.099 0.901 32 H 0.061 0.939 33 H 0.144 0.856 34 H 0.227 0.773 35 H -0.220 1.220 36 H -0.221 1.221 37 H 0.146 0.854 38 H 0.253 0.747 39 H 0.082 0.918 40 H 0.076 0.924 41 H 0.080 0.920 42 H 0.092 0.908 43 H 0.109 0.891 44 H 0.098 0.902 45 H 0.104 0.896 46 H 0.109 0.891 47 H 0.078 0.922 48 H 0.109 0.891 49 H 0.241 0.759 50 H 0.100 0.900 51 H 0.080 0.920 52 H 0.083 0.917 53 H 0.071 0.929 54 H 0.177 0.823 55 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -5.845 5.478 3.151 8.608 hybrid contribution 0.840 1.314 1.038 1.874 sum -5.005 6.792 4.190 9.420 Atomic orbital electron populations 1.22558 0.84342 1.03249 1.02065 1.59357 1.09477 1.15012 1.40603 1.22421 1.00661 0.86438 1.01746 1.18945 0.93894 0.92903 0.89619 1.20103 0.99365 0.96210 0.95442 1.24730 0.96384 1.01998 0.92545 1.86627 1.27934 1.63285 1.56103 0.94368 0.85193 0.78932 0.77416 1.21175 0.97393 0.98557 0.91578 1.19817 1.03413 0.99084 0.92700 1.18446 0.79600 0.83499 0.83827 1.90801 1.39570 1.29599 1.85947 1.45838 1.52434 1.32794 1.04284 1.20888 0.96733 0.91640 0.85406 1.21293 0.96399 0.96126 0.96888 1.21560 0.94801 0.99727 0.98402 1.21060 1.00013 0.95089 0.93799 1.21644 0.92856 0.97106 1.03074 1.21266 0.98880 0.97649 0.92543 1.22142 0.98841 0.96985 0.99140 1.21092 0.92840 0.90468 0.86198 1.86541 1.87416 1.43001 1.22023 1.22155 0.95599 1.00310 0.99096 1.21375 1.01108 0.98001 0.93360 1.21411 0.93377 0.91927 1.00649 1.21855 1.01845 1.01518 0.92167 0.93783 0.89981 0.90951 0.92062 0.90100 0.93947 0.85620 0.77291 1.22041 1.22148 0.85406 0.74730 0.91845 0.92355 0.91974 0.90754 0.89127 0.90165 0.89628 0.89118 0.92239 0.89095 0.75923 0.90001 0.92025 0.91737 0.92918 0.82335 0.83141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.34 127.69 1.19 1.09 16 2 N -0.52 0.36 4.20 -745.09 -3.13 -2.77 16 3 C 0.03 -0.08 9.38 127.69 1.20 1.12 16 4 C 0.14 -0.04 4.70 38.47 0.18 0.14 16 5 C -0.11 -0.22 5.27 -19.78 -0.10 -0.32 16 6 C -0.05 -0.12 2.33 71.23 0.17 0.04 16 7 O -0.53 -2.58 12.88 -148.98 -1.92 -4.49 16 8 Si 0.73 2.70 30.25 68.60 2.08 4.78 16 9 C -0.07 -0.26 8.19 22.50 0.18 -0.08 16 10 C -0.15 -0.22 5.88 -20.08 -0.12 -0.34 16 11 C 0.56 2.74 7.73 86.69 0.67 3.41 16 12 O -0.58 -8.23 16.00 -4.02 -0.06 -8.29 16 13 N -0.70 1.40 4.18 -445.72 -1.86 -0.46 16 14 C 0.16 0.02 2.05 44.99 0.09 0.11 16 15 C -0.09 -0.12 2.87 -10.81 -0.03 -0.16 16 16 C -0.11 0.34 5.03 30.60 0.15 0.50 16 17 C -0.08 0.53 3.19 -10.79 -0.03 0.49 16 18 C -0.11 0.98 5.02 30.59 0.15 1.14 16 19 C -0.08 0.43 2.88 -10.79 -0.03 0.40 16 20 C -0.13 0.42 4.81 30.59 0.15 0.57 16 21 C 0.13 -0.08 1.15 -10.83 -0.01 -0.09 16 22 O -0.58 -1.18 12.98 -148.98 -1.93 -3.11 16 23 C -0.13 0.55 4.81 30.56 0.15 0.70 16 24 C -0.10 -0.35 4.84 30.58 0.15 -0.20 16 25 C -0.05 0.27 9.53 22.50 0.21 0.48 16 26 C -0.15 0.67 8.53 22.36 0.19 0.86 16 27 H 0.04 -0.29 7.10 -2.39 -0.02 -0.31 16 28 H 0.08 -0.44 8.12 -2.39 -0.02 -0.45 16 29 H 0.07 -0.29 8.14 -2.38 -0.02 -0.31 16 30 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 31 H 0.08 -0.28 8.12 -2.38 -0.02 -0.30 16 32 H 0.04 -0.21 7.32 -2.39 -0.02 -0.23 16 33 H 0.13 0.27 7.77 -2.39 -0.02 0.25 16 34 H 0.38 0.01 8.70 -74.06 -0.64 -0.63 16 35 H -0.29 -2.92 7.11 99.48 0.71 -2.21 16 36 H -0.29 -2.84 6.68 99.48 0.66 -2.18 16 37 H 0.13 0.88 4.43 -2.91 -0.01 0.86 16 38 H 0.41 -3.54 4.88 -92.70 -0.45 -3.99 16 39 H 0.06 0.40 7.58 -2.39 -0.02 0.38 16 40 H 0.06 0.38 8.14 -2.39 -0.02 0.36 16 41 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 42 H 0.07 -0.36 7.60 -2.39 -0.02 -0.37 16 43 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 44 H 0.08 -0.98 6.51 -2.39 -0.02 -0.99 16 45 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 46 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 47 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 48 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 49 H 0.39 -2.34 9.04 -74.06 -0.67 -3.01 16 50 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 51 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 52 H 0.06 0.32 8.14 -2.39 -0.02 0.30 16 53 H 0.05 0.36 8.14 -2.39 -0.02 0.34 16 54 H 0.16 -1.92 6.39 -2.91 -0.02 -1.93 16 55 H 0.15 -1.27 6.99 -2.91 -0.02 -1.29 16 Total: 0.00 -20.78 408.21 -3.17 -23.95 By element: Atomic # 1 Polarization: -18.62 SS G_CDS: -0.84 Total: -19.46 kcal Atomic # 6 Polarization: 5.36 SS G_CDS: 4.51 Total: 9.86 kcal Atomic # 7 Polarization: 1.76 SS G_CDS: -4.99 Total: -3.24 kcal Atomic # 8 Polarization: -11.98 SS G_CDS: -3.92 Total: -15.90 kcal Atomic # 14 Polarization: 2.70 SS G_CDS: 2.08 Total: 4.78 kcal Total: -20.78 -3.17 -23.95 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_13422196.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.889 kcal (2) G-P(sol) polarization free energy of solvation -20.781 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.670 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.172 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.953 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.842 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds