Wall clock time and date at job start Thu Mar 4 2021 18:03:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86306 * 109.46898 * 2 1 4 4 C 1.50696 * 109.47254 * 240.00412 * 2 1 3 5 5 C 1.34186 * 125.43466 * 299.99663 * 4 2 1 6 6 C 1.47024 * 105.95053 * 179.97438 * 5 4 2 7 7 C 1.47379 * 127.18886 * 179.97438 * 6 5 4 8 8 O 1.21617 * 119.99954 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99987 * 180.02562 * 7 6 5 10 10 C 1.46500 * 119.99944 * 180.02562 * 9 7 6 11 11 C 1.52997 * 109.46927 * 155.00048 * 10 9 7 12 12 C 1.52997 * 109.47457 * 59.99484 * 11 10 9 13 13 C 1.53002 * 109.46817 * 60.00169 * 12 11 10 14 14 C 1.52996 * 109.47346 * 299.99737 * 13 12 11 15 15 C 1.53002 * 109.46891 * 59.99997 * 14 13 12 16 16 C 1.52997 * 109.46978 * 60.00410 * 15 14 13 17 17 C 1.53006 * 109.47164 * 299.99874 * 16 15 14 18 18 O 1.42895 * 109.47000 * 180.02562 * 17 16 15 19 19 C 1.52997 * 109.47127 * 59.99836 * 17 16 15 20 20 C 1.52999 * 109.46623 * 299.99900 * 17 16 15 21 21 C 1.36411 * 105.61589 * 0.22718 * 6 5 4 22 22 O 1.33648 * 108.39881 * 359.63047 * 21 6 5 23 23 H 0.96698 * 114.00250 * 60.00479 * 1 2 3 24 24 H 1.08995 * 109.47525 * 119.99819 * 2 1 3 25 25 H 1.48497 * 109.99914 * 298.68286 * 3 2 1 26 26 H 1.48505 * 109.99786 * 59.99847 * 3 2 1 27 27 H 1.07992 * 127.02299 * 359.97438 * 5 4 2 28 28 H 0.97001 * 119.99485 * 359.97438 * 9 7 6 29 29 H 1.09000 * 109.47381 * 34.99693 * 10 9 7 30 30 H 1.09001 * 109.46989 * 299.99155 * 11 10 9 31 31 H 1.08993 * 109.47194 * 299.99651 * 12 11 10 32 32 H 1.09002 * 109.46695 * 179.97438 * 12 11 10 33 33 H 1.09004 * 109.46733 * 179.97438 * 13 12 11 34 34 H 1.08992 * 109.47554 * 180.02562 * 14 13 12 35 35 H 1.09004 * 109.47108 * 300.00289 * 14 13 12 36 36 H 1.09002 * 109.47097 * 180.02562 * 15 14 13 37 37 H 1.09001 * 109.47375 * 59.99908 * 16 15 14 38 38 H 1.09000 * 109.47140 * 179.97438 * 16 15 14 39 39 H 0.96696 * 114.00485 * 299.99339 * 18 17 16 40 40 H 1.09002 * 109.47153 * 180.02562 * 19 17 16 41 41 H 1.09001 * 109.46832 * 60.00321 * 19 17 16 42 42 H 1.09000 * 109.47486 * 299.99829 * 20 17 16 43 43 H 1.09002 * 109.46716 * 179.97438 * 20 17 16 44 44 H 1.08009 * 125.79902 * 179.75350 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.6754 -1.9881 -1.5501 6 6 2.3681 -2.2326 -2.8237 7 6 2.3971 -3.4879 -3.5954 8 8 1.8016 -4.4665 -3.1871 9 7 3.0837 -3.5513 -4.7535 10 6 3.1121 -4.7989 -5.5208 11 6 3.3785 -4.4854 -6.9944 12 6 4.7259 -3.7731 -7.1288 13 6 5.8367 -4.6774 -6.5909 14 6 5.5704 -4.9910 -5.1173 15 6 4.2229 -5.7032 -4.9829 16 6 4.2527 -7.0062 -5.7842 17 6 4.5191 -6.6927 -7.2579 18 8 4.5463 -7.9097 -8.0063 19 6 5.8665 -5.9804 -7.3923 20 6 3.4083 -5.7885 -7.7957 21 6 2.9829 -1.0564 -3.1390 22 8 2.7058 -0.1657 -2.1818 23 1 -0.3933 0.4416 -0.7650 24 1 1.7924 -0.5138 0.8899 25 1 1.5878 2.4586 -1.2242 26 1 1.5614 2.4679 1.2085 27 1 1.0819 -2.6929 -0.9870 28 1 3.5583 -2.7706 -5.0792 29 1 2.1522 -5.3064 -5.4250 30 1 2.5871 -3.8412 -7.3776 31 1 4.7047 -2.8448 -6.5580 32 1 4.9158 -3.5502 -8.1787 33 1 6.7967 -4.1701 -6.6871 34 1 6.3619 -5.6348 -4.7339 35 1 5.5492 -4.0626 -4.5464 36 1 4.0330 -5.9262 -3.9329 37 1 5.0441 -7.6505 -5.4009 38 1 3.2929 -7.5139 -5.6880 39 1 5.2279 -8.5327 -7.7195 40 1 6.0560 -5.7567 -8.4421 41 1 6.6578 -6.6247 -7.0091 42 1 2.4483 -6.2959 -7.6999 43 1 3.5983 -5.5648 -8.8454 44 1 3.5889 -0.8751 -4.0145 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_13456056.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:03:26 Heat of formation + Delta-G solvation = -109.195099 kcal Electronic energy + Delta-G solvation = -28228.805258 eV Core-core repulsion = 24306.287248 eV Total energy + Delta-G solvation = -3922.518010 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.150 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.73102 -42.83167 -40.27088 -38.17154 -37.61607 -35.43652 -34.05660 -33.76479 -33.10517 -31.95961 -30.84482 -27.22163 -26.99458 -26.44246 -24.65418 -22.81103 -22.54574 -22.39030 -22.12678 -20.74421 -19.55745 -18.71608 -18.11882 -17.72163 -17.55273 -17.39338 -16.80408 -16.24274 -16.18710 -15.88024 -15.74995 -15.42931 -15.21426 -15.05636 -14.96380 -14.40684 -14.29208 -14.18467 -13.98578 -13.62161 -13.57761 -13.52167 -13.38906 -13.04322 -12.95336 -12.56399 -12.14391 -12.05993 -11.96173 -11.83289 -11.39125 -11.29456 -11.19413 -11.00160 -10.85232 -10.77565 -10.41737 -10.10670 -9.78257 -4.91135 0.26140 0.80562 1.18933 1.53243 1.75217 1.95726 2.00944 2.24019 3.12788 3.20283 3.39947 3.43534 3.48109 3.55274 3.80754 3.86275 3.95886 3.96650 4.05824 4.12171 4.17945 4.21841 4.24726 4.33478 4.38301 4.42789 4.51196 4.57094 4.61657 4.68837 4.77025 4.85078 4.89023 4.99505 5.00124 5.03151 5.04588 5.11633 5.12498 5.15686 5.30765 5.32777 5.37549 5.47425 5.50501 5.82393 6.34067 6.46020 6.83154 7.14068 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.047 4.047 3 Si 0.795 3.205 4 C -0.049 4.049 5 C -0.152 4.152 6 C -0.269 4.269 7 C 0.587 3.413 8 O -0.587 6.587 9 N -0.700 5.700 10 C 0.160 3.840 11 C -0.082 4.082 12 C -0.111 4.111 13 C -0.081 4.081 14 C -0.105 4.105 15 C -0.090 4.090 16 C -0.135 4.135 17 C 0.134 3.866 18 O -0.580 6.580 19 C -0.134 4.134 20 C -0.100 4.100 21 C 0.067 3.933 22 O -0.163 6.163 23 H 0.391 0.609 24 H 0.147 0.853 25 H -0.285 1.285 26 H -0.289 1.289 27 H 0.141 0.859 28 H 0.414 0.586 29 H 0.059 0.941 30 H 0.093 0.907 31 H 0.087 0.913 32 H 0.082 0.918 33 H 0.093 0.907 34 H 0.065 0.935 35 H 0.074 0.926 36 H 0.052 0.948 37 H 0.075 0.925 38 H 0.052 0.948 39 H 0.389 0.611 40 H 0.072 0.928 41 H 0.071 0.929 42 H 0.055 0.945 43 H 0.080 0.920 44 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.646 5.701 -2.977 9.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.155 4.155 3 Si 0.697 3.303 4 C -0.097 4.097 5 C -0.172 4.172 6 C -0.273 4.273 7 C 0.376 3.624 8 O -0.468 6.468 9 N -0.352 5.352 10 C 0.055 3.945 11 C -0.101 4.101 12 C -0.149 4.149 13 C -0.099 4.099 14 C -0.142 4.142 15 C -0.110 4.110 16 C -0.173 4.173 17 C 0.094 3.906 18 O -0.388 6.388 19 C -0.172 4.172 20 C -0.138 4.138 21 C -0.003 4.003 22 O -0.058 6.058 23 H 0.241 0.759 24 H 0.165 0.835 25 H -0.212 1.212 26 H -0.216 1.216 27 H 0.159 0.841 28 H 0.253 0.747 29 H 0.078 0.922 30 H 0.112 0.888 31 H 0.105 0.895 32 H 0.100 0.900 33 H 0.111 0.889 34 H 0.084 0.916 35 H 0.093 0.907 36 H 0.070 0.930 37 H 0.094 0.906 38 H 0.071 0.929 39 H 0.239 0.761 40 H 0.091 0.909 41 H 0.089 0.911 42 H 0.074 0.926 43 H 0.098 0.902 44 H 0.279 0.721 Dipole moment (debyes) X Y Z Total from point charges 6.694 6.113 -2.441 9.388 hybrid contribution -1.034 -1.123 -0.133 1.532 sum 5.659 4.990 -2.574 7.972 Atomic orbital electron populations 1.86652 1.17547 1.80611 1.50024 1.24726 0.83455 1.13418 0.93894 0.93449 0.89746 0.70090 0.76992 1.22680 0.99651 0.93406 0.94003 1.22542 1.02280 0.96161 0.96265 1.21463 1.09920 0.95903 1.00044 1.17546 0.77771 0.86428 0.80671 1.90795 1.46710 1.38934 1.70360 1.45709 1.52293 1.15257 1.21965 1.20860 0.98226 0.84497 0.90940 1.21272 1.00034 0.96809 0.91964 1.21667 0.92190 0.98152 1.02847 1.21065 0.99856 0.95275 0.93732 1.21542 0.95144 1.00758 0.96796 1.21300 0.96302 0.94769 0.98581 1.22152 1.02156 0.97321 0.95683 1.21135 0.95753 0.84464 0.89252 1.86520 1.60994 1.29778 1.61504 1.22174 0.96166 0.97561 1.01278 1.21405 0.97694 0.94466 1.00254 1.25304 0.97200 0.85169 0.92642 1.83716 1.54212 1.39933 1.27934 0.75941 0.83534 1.21162 1.21602 0.84091 0.74670 0.92233 0.88849 0.89506 0.89985 0.88886 0.91641 0.90722 0.92996 0.90615 0.92910 0.76105 0.90914 0.91058 0.92578 0.90169 0.72081 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.97 12.86 -148.98 -1.92 -2.88 16 2 C -0.05 0.08 2.98 71.23 0.21 0.29 16 3 Si 0.79 -3.07 32.09 68.60 2.20 -0.87 16 4 C -0.05 -0.01 6.20 24.76 0.15 0.14 16 5 C -0.15 -0.77 10.88 23.65 0.26 -0.52 16 6 C -0.27 -0.55 6.31 -18.99 -0.12 -0.67 16 7 C 0.59 3.47 7.78 86.65 0.67 4.15 16 8 O -0.59 -9.79 16.65 -4.09 -0.07 -9.86 16 9 N -0.70 1.59 4.22 -445.83 -1.88 -0.30 16 10 C 0.16 0.07 2.05 44.99 0.09 0.16 16 11 C -0.08 0.34 2.88 -10.79 -0.03 0.31 16 12 C -0.11 0.97 5.02 30.59 0.15 1.12 16 13 C -0.08 0.56 3.19 -10.79 -0.03 0.53 16 14 C -0.10 0.46 5.04 30.59 0.15 0.62 16 15 C -0.09 -0.07 2.87 -10.79 -0.03 -0.10 16 16 C -0.13 -0.16 4.81 30.60 0.15 -0.01 16 17 C 0.13 -0.05 1.15 -10.79 -0.01 -0.06 16 18 O -0.58 -1.34 12.98 -148.98 -1.93 -3.27 16 19 C -0.13 0.57 4.82 30.59 0.15 0.72 16 20 C -0.10 0.02 4.84 30.60 0.15 0.17 16 21 C 0.07 -0.44 11.61 67.39 0.78 0.34 16 22 O -0.16 0.54 8.89 4.54 0.04 0.58 16 23 H 0.39 -1.55 8.70 -74.06 -0.64 -2.20 16 24 H 0.15 -0.61 7.96 -2.39 -0.02 -0.63 16 25 H -0.29 -0.28 7.11 99.48 0.71 0.42 16 26 H -0.29 -0.78 7.11 99.48 0.71 -0.07 16 27 H 0.14 1.19 8.06 -2.91 -0.02 1.17 16 28 H 0.41 -4.26 5.84 -92.71 -0.54 -4.80 16 29 H 0.06 0.44 7.58 -2.39 -0.02 0.42 16 30 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 31 H 0.09 -1.15 6.51 -2.39 -0.02 -1.16 16 32 H 0.08 -0.76 8.14 -2.39 -0.02 -0.78 16 33 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 34 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 35 H 0.07 -0.45 7.60 -2.38 -0.02 -0.47 16 36 H 0.05 0.34 8.14 -2.39 -0.02 0.32 16 37 H 0.08 -0.04 8.14 -2.39 -0.02 -0.05 16 38 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 39 H 0.39 -1.79 9.05 -74.06 -0.67 -2.46 16 40 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 41 H 0.07 -0.36 8.14 -2.39 -0.02 -0.37 16 42 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 43 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 44 H 0.26 -4.76 7.47 -2.91 -0.02 -4.78 16 Total: 0.00 -24.83 342.66 -1.64 -26.47 By element: Atomic # 1 Polarization: -16.29 SS G_CDS: -0.77 Total: -17.06 kcal Atomic # 6 Polarization: 4.50 SS G_CDS: 2.69 Total: 7.19 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -1.88 Total: -0.30 kcal Atomic # 8 Polarization: -11.55 SS G_CDS: -3.88 Total: -15.43 kcal Atomic # 14 Polarization: -3.07 SS G_CDS: 2.20 Total: -0.87 kcal Total: -24.83 -1.64 -26.47 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_13456056.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.723 kcal (2) G-P(sol) polarization free energy of solvation -24.834 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.557 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.638 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.472 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds