Wall clock time and date at job start Thu Mar 4 2021 18:03:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86297 * 109.47066 * 2 1 4 4 C 1.50700 * 109.47288 * 120.00065 * 2 1 3 5 5 C 1.34846 * 125.89142 * 245.04325 * 4 2 1 6 6 C 1.40899 * 107.41670 * 179.73505 * 5 4 2 7 7 C 1.34851 * 107.41802 * 0.37692 * 6 5 4 8 8 C 1.50698 * 125.89067 * 179.88626 * 7 6 5 9 9 C 1.50698 * 109.46944 * 274.68961 * 8 7 6 10 10 O 1.21283 * 120.00472 * 0.02562 * 9 8 7 11 11 N 1.34777 * 119.99538 * 179.97438 * 9 8 7 12 12 C 1.46499 * 119.99665 * 179.72653 * 11 9 8 13 13 C 1.52999 * 109.47136 * 275.27771 * 12 11 9 14 14 C 1.53001 * 109.47283 * 299.99920 * 13 12 11 15 15 C 1.52996 * 109.46993 * 300.00062 * 14 13 12 16 16 C 1.53001 * 109.47349 * 60.00188 * 15 14 13 17 17 C 1.52999 * 109.47493 * 155.28120 * 12 11 9 18 18 C 1.52992 * 109.47689 * 180.02562 * 17 12 11 19 19 C 1.52999 * 109.46921 * 299.99639 * 18 17 12 20 20 O 1.42902 * 109.47123 * 179.97438 * 19 18 17 21 21 C 1.53000 * 109.47410 * 299.99478 * 15 14 13 22 22 C 1.53002 * 109.47179 * 60.00100 * 19 18 17 23 23 N 1.36349 * 108.21691 * 359.62516 * 7 6 5 24 24 H 0.96702 * 114.00011 * 299.99478 * 1 2 3 25 25 H 1.08999 * 109.47421 * 240.00235 * 2 1 3 26 26 H 1.48496 * 109.99974 * 178.67893 * 3 2 1 27 27 H 1.48494 * 110.00262 * 300.00126 * 3 2 1 28 28 H 1.08001 * 126.29064 * 359.97438 * 5 4 2 29 29 H 1.07996 * 126.29250 * 180.24418 * 6 5 4 30 30 H 1.09003 * 109.46601 * 154.69402 * 8 7 6 31 31 H 1.08993 * 109.46922 * 34.69701 * 8 7 6 32 32 H 0.97001 * 120.00485 * 0.02562 * 11 9 8 33 33 H 1.08999 * 109.47480 * 35.27807 * 12 11 9 34 34 H 1.08999 * 109.47488 * 60.00276 * 13 12 11 35 35 H 1.08997 * 109.47096 * 179.97438 * 14 13 12 36 36 H 1.08996 * 109.47210 * 60.00152 * 14 13 12 37 37 H 1.09006 * 109.46869 * 180.02562 * 15 14 13 38 38 H 1.08997 * 109.46930 * 180.02562 * 16 15 14 39 39 H 1.08991 * 109.47002 * 59.99317 * 16 15 14 40 40 H 1.09009 * 109.46506 * 300.00089 * 17 12 11 41 41 H 1.08999 * 109.47499 * 59.99555 * 18 17 12 42 42 H 1.09006 * 109.47246 * 179.97438 * 18 17 12 43 43 H 0.96700 * 113.99645 * 59.99883 * 20 19 18 44 44 H 1.08999 * 109.46923 * 179.97438 * 21 15 14 45 45 H 1.08997 * 109.47191 * 300.00590 * 21 15 14 46 46 H 1.08999 * 109.47056 * 60.00198 * 22 19 18 47 47 H 1.09000 * 109.46999 * 179.97438 * 22 19 18 48 48 H 0.96993 * 125.63390 * 180.26279 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6294 -0.1485 2.2380 6 6 2.8920 -1.1591 3.1841 7 6 2.3516 -2.3019 2.7145 8 6 2.3915 -3.6442 3.3983 9 6 3.6788 -4.3467 3.0510 10 8 4.4846 -3.8100 2.3206 11 7 3.9349 -5.5710 3.5529 12 6 5.1835 -6.2565 3.2105 13 6 5.0133 -6.9919 1.8797 14 6 3.8857 -8.0185 2.0049 15 6 4.2325 -9.0254 3.1033 16 6 4.4027 -8.2901 4.4342 17 6 5.5304 -7.2635 4.3089 18 6 6.8347 -7.9789 3.9516 19 6 6.6650 -8.7143 2.6207 20 8 7.8835 -9.3820 2.2867 21 6 5.5365 -9.7414 2.7457 22 6 6.3183 -7.7073 1.5222 23 7 1.7577 -2.0320 1.5172 24 1 -0.3933 0.4416 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 3.5345 1.7703 0.0322 27 1 1.5614 2.4679 -1.2084 28 1 2.9286 0.8868 2.3089 29 1 3.4294 -1.0408 4.1134 30 1 1.5470 -4.2472 3.0645 31 1 2.3338 -3.5040 4.4776 32 1 3.2906 -6.0002 4.1374 33 1 5.9869 -5.5252 3.1213 34 1 4.7663 -6.2745 1.0971 35 1 3.7641 -8.5420 1.0567 36 1 2.9567 -7.5085 2.2596 37 1 3.4294 -9.7571 3.1922 38 1 4.6502 -9.0074 5.2166 39 1 3.4738 -7.7801 4.6888 40 1 5.6516 -6.7396 5.2570 41 1 7.6378 -7.2474 3.8627 42 1 7.0819 -8.6961 4.7344 43 1 8.1652 -10.0365 2.9405 44 1 5.7838 -10.4584 3.5285 45 1 5.4152 -10.2652 1.7976 46 1 7.1214 -6.9757 1.4333 47 1 6.1978 -8.2311 0.5740 48 1 1.2889 -2.6741 0.9615 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_14644196.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:03:33 Heat of formation + Delta-G solvation = -88.153319 kcal Electronic energy + Delta-G solvation = -29951.947905 eV Core-core repulsion = 25972.523379 eV Total energy + Delta-G solvation = -3979.424527 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.177 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.87883 -42.28506 -40.27652 -37.75004 -37.58478 -35.34455 -33.79344 -33.48655 -32.82810 -31.93015 -31.09313 -29.32279 -27.02720 -26.68647 -25.05711 -23.02179 -22.60230 -22.41568 -21.53743 -21.34152 -20.92966 -19.18718 -18.72364 -18.08825 -18.00365 -17.18849 -16.65904 -16.41127 -16.18786 -15.95171 -15.55516 -15.39043 -15.32434 -15.19828 -14.85759 -14.58428 -14.52456 -14.40289 -14.29051 -14.06565 -13.84303 -13.63987 -13.59674 -13.49104 -13.35515 -13.03793 -12.74189 -12.52998 -12.12748 -12.07032 -12.00809 -11.98937 -11.80730 -11.54247 -11.26850 -10.97271 -10.77908 -10.64286 -10.48064 -10.01965 -9.79889 -8.96407 -4.97803 1.10871 1.25585 1.62186 1.68763 1.86206 1.94286 2.28127 2.50960 3.12651 3.36396 3.41338 3.50665 3.67592 3.77252 3.79192 3.86202 3.93037 4.01561 4.06763 4.10406 4.14570 4.19404 4.22809 4.23469 4.36590 4.37066 4.48556 4.53831 4.58246 4.63476 4.67268 4.74484 4.79754 4.82392 4.95828 4.96134 4.98836 5.02512 5.08953 5.13065 5.25383 5.28802 5.29019 5.32904 5.39031 5.45576 5.51244 6.00110 6.13488 6.52703 6.66366 6.70697 6.84035 7.27049 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.053 4.053 3 Si 0.811 3.189 4 C -0.022 4.022 5 C -0.201 4.201 6 C -0.201 4.201 7 C 0.034 3.966 8 C -0.066 4.066 9 C 0.510 3.490 10 O -0.579 6.579 11 N -0.708 5.708 12 C 0.160 3.840 13 C -0.086 4.086 14 C -0.106 4.106 15 C -0.082 4.082 16 C -0.108 4.108 17 C -0.084 4.084 18 C -0.134 4.134 19 C 0.134 3.866 20 O -0.582 6.582 21 C -0.134 4.134 22 C -0.102 4.102 23 N -0.538 5.538 24 H 0.397 0.603 25 H 0.099 0.901 26 H -0.297 1.297 27 H -0.292 1.292 28 H 0.153 0.847 29 H 0.141 0.859 30 H 0.129 0.871 31 H 0.146 0.854 32 H 0.416 0.584 33 H 0.057 0.943 34 H 0.051 0.949 35 H 0.057 0.943 36 H 0.077 0.923 37 H 0.090 0.910 38 H 0.084 0.916 39 H 0.084 0.916 40 H 0.092 0.908 41 H 0.057 0.943 42 H 0.091 0.909 43 H 0.391 0.609 44 H 0.082 0.918 45 H 0.059 0.941 46 H 0.049 0.951 47 H 0.060 0.940 48 H 0.417 0.583 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.532 -3.961 8.120 10.594 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.162 4.162 3 Si 0.716 3.284 4 C -0.136 4.136 5 C -0.226 4.226 6 C -0.225 4.225 7 C -0.080 4.080 8 C -0.107 4.107 9 C 0.297 3.703 10 O -0.458 6.458 11 N -0.361 5.361 12 C 0.055 3.945 13 C -0.106 4.106 14 C -0.144 4.144 15 C -0.100 4.100 16 C -0.145 4.145 17 C -0.102 4.102 18 C -0.172 4.172 19 C 0.094 3.906 20 O -0.391 6.391 21 C -0.172 4.172 22 C -0.140 4.140 23 N -0.133 5.133 24 H 0.248 0.752 25 H 0.116 0.884 26 H -0.224 1.224 27 H -0.220 1.220 28 H 0.171 0.829 29 H 0.159 0.841 30 H 0.147 0.853 31 H 0.164 0.836 32 H 0.255 0.745 33 H 0.075 0.925 34 H 0.070 0.930 35 H 0.076 0.924 36 H 0.095 0.905 37 H 0.108 0.892 38 H 0.103 0.897 39 H 0.102 0.898 40 H 0.111 0.889 41 H 0.076 0.924 42 H 0.109 0.891 43 H 0.241 0.759 44 H 0.101 0.899 45 H 0.078 0.922 46 H 0.068 0.932 47 H 0.079 0.921 48 H 0.255 0.745 Dipole moment (debyes) X Y Z Total from point charges -4.538 -3.026 6.039 8.138 hybrid contribution 0.263 -1.314 -0.327 1.379 sum -4.274 -4.340 5.713 8.351 Atomic orbital electron populations 1.86440 1.17111 1.82261 1.50692 1.24906 0.85207 1.11261 0.94862 0.93082 0.77216 0.74015 0.84115 1.20970 1.07664 0.84943 0.99991 1.20922 1.05594 1.00402 0.95672 1.20859 1.06774 0.92655 1.02251 1.19924 1.03043 0.96384 0.88644 1.20260 0.95693 0.90751 1.03951 1.21088 0.88674 0.81239 0.79285 1.90764 1.50000 1.66735 1.38269 1.45929 1.21862 1.17313 1.51033 1.20766 0.86466 0.93173 0.94093 1.21289 0.95163 0.96923 0.97184 1.21550 0.97447 0.96165 0.99232 1.21063 0.97072 0.97016 0.94841 1.21632 0.98154 0.97710 0.97038 1.21260 0.95520 0.95592 0.97875 1.22147 0.97375 1.00311 0.97344 1.21129 0.84101 0.91704 0.93664 1.86538 1.41669 1.58481 1.52389 1.22192 0.94993 0.97630 1.02371 1.21404 0.96939 0.97339 0.98296 1.41896 1.44300 1.09183 1.17956 0.75217 0.88397 1.22395 1.21978 0.82943 0.84088 0.85336 0.83633 0.74474 0.92455 0.93046 0.92394 0.90462 0.89164 0.89744 0.89764 0.88930 0.92399 0.89068 0.75876 0.89927 0.92226 0.93198 0.92091 0.74513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.65 12.88 -148.98 -1.92 -2.57 16 2 C -0.05 -0.12 3.08 71.24 0.22 0.10 16 3 Si 0.81 0.34 30.60 68.60 2.10 2.44 16 4 C -0.02 -0.10 6.50 41.08 0.27 0.17 16 5 C -0.20 -0.98 9.37 22.14 0.21 -0.77 16 6 C -0.20 -1.06 10.77 22.14 0.24 -0.82 16 7 C 0.03 0.09 5.66 41.08 0.23 0.33 16 8 C -0.07 0.33 6.24 29.10 0.18 0.51 16 9 C 0.51 0.85 7.78 87.66 0.68 1.53 16 10 O -0.58 -7.73 15.70 -3.04 -0.05 -7.78 16 11 N -0.71 2.89 4.23 -442.54 -1.87 1.02 16 12 C 0.16 -0.01 2.05 44.99 0.09 0.08 16 13 C -0.09 -0.17 2.87 -10.78 -0.03 -0.20 16 14 C -0.11 0.31 5.04 30.59 0.15 0.47 16 15 C -0.08 0.50 3.19 -10.79 -0.03 0.47 16 16 C -0.11 0.97 5.02 30.60 0.15 1.13 16 17 C -0.08 0.43 2.88 -10.80 -0.03 0.40 16 18 C -0.13 0.36 4.82 30.59 0.15 0.50 16 19 C 0.13 0.03 1.15 -10.76 -0.01 0.02 16 20 O -0.58 -1.69 12.98 -148.98 -1.93 -3.62 16 21 C -0.13 0.46 4.82 30.63 0.15 0.61 16 22 C -0.10 -0.47 4.85 30.61 0.15 -0.32 16 23 N -0.54 -1.66 6.08 -171.11 -1.04 -2.70 16 24 H 0.40 -2.70 8.70 -74.06 -0.64 -3.34 16 25 H 0.10 0.41 7.96 -2.39 -0.02 0.39 16 26 H -0.30 -2.17 7.11 99.48 0.71 -1.46 16 27 H -0.29 -1.86 7.11 99.48 0.71 -1.15 16 28 H 0.15 0.16 6.24 -2.91 -0.02 0.14 16 29 H 0.14 0.43 8.06 -2.91 -0.02 0.40 16 30 H 0.13 -1.37 8.14 -2.39 -0.02 -1.39 16 31 H 0.15 -1.53 8.14 -2.39 -0.02 -1.55 16 32 H 0.42 -4.62 6.87 -92.71 -0.64 -5.25 16 33 H 0.06 0.40 7.58 -2.39 -0.02 0.38 16 34 H 0.05 0.39 8.14 -2.39 -0.02 0.37 16 35 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 36 H 0.08 -0.41 7.60 -2.39 -0.02 -0.43 16 37 H 0.09 -0.71 8.14 -2.38 -0.02 -0.73 16 38 H 0.08 -0.88 8.14 -2.39 -0.02 -0.90 16 39 H 0.08 -1.05 6.50 -2.39 -0.02 -1.07 16 40 H 0.09 -0.60 8.14 -2.38 -0.02 -0.62 16 41 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 42 H 0.09 -0.57 8.14 -2.38 -0.02 -0.59 16 43 H 0.39 -2.07 9.05 -74.06 -0.67 -2.74 16 44 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 45 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 46 H 0.05 0.42 8.14 -2.39 -0.02 0.40 16 47 H 0.06 0.39 8.14 -2.39 -0.02 0.37 16 48 H 0.42 -0.07 8.96 -92.71 -0.83 -0.90 16 Total: 0.00 -25.65 366.13 -3.68 -29.34 By element: Atomic # 1 Polarization: -18.59 SS G_CDS: -1.73 Total: -20.32 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: 2.76 Total: 4.19 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -2.91 Total: -1.68 kcal Atomic # 8 Polarization: -10.07 SS G_CDS: -3.90 Total: -13.97 kcal Atomic # 14 Polarization: 0.34 SS G_CDS: 2.10 Total: 2.44 kcal Total: -25.65 -3.68 -29.34 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_14644196.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.816 kcal (2) G-P(sol) polarization free energy of solvation -25.653 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.469 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.684 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.338 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.153 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds