Wall clock time and date at job start Thu Mar 4 2021 18:03:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86302 * 109.47308 * 2 1 4 4 C 1.50708 * 109.46801 * 119.99879 * 2 1 3 5 5 C 1.31110 * 118.54473 * 249.39557 * 4 2 1 6 6 N 1.38929 * 121.84561 * 180.43406 * 5 4 2 7 7 C 1.47029 * 118.88424 * 346.67498 * 6 5 4 8 8 C 1.53543 * 107.65579 * 43.66914 * 7 6 5 9 9 C 1.50201 * 118.54211 * 69.41568 * 4 2 1 10 10 C 1.50701 * 109.33620 * 39.66494 * 9 4 2 11 11 O 1.21287 * 119.99748 * 91.84213 * 10 9 4 12 12 N 1.34772 * 119.99829 * 271.84764 * 10 9 4 13 13 C 1.46506 * 119.99629 * 184.66310 * 12 10 9 14 14 C 1.52999 * 109.47274 * 272.76716 * 13 12 10 15 15 C 1.53002 * 109.47238 * 180.02562 * 14 13 12 16 16 C 1.53002 * 109.46887 * 60.00118 * 15 14 13 17 17 C 1.52999 * 109.47085 * 299.99976 * 16 15 14 18 18 C 1.53002 * 109.47238 * 60.00239 * 17 16 15 19 19 C 1.52999 * 109.47221 * 59.99672 * 18 17 16 20 20 C 1.52999 * 109.47282 * 300.00301 * 19 18 17 21 21 O 1.42899 * 109.47383 * 179.97438 * 20 19 18 22 22 C 1.52999 * 109.47019 * 60.00085 * 16 15 14 23 23 C 1.52999 * 109.47282 * 300.00398 * 14 13 12 24 24 H 0.96700 * 114.00051 * 59.99996 * 1 2 3 25 25 H 1.08995 * 109.46860 * 239.99449 * 2 1 3 26 26 H 1.48499 * 109.99806 * 59.99771 * 3 2 1 27 27 H 1.48501 * 109.99670 * 181.31758 * 3 2 1 28 28 H 1.08001 * 119.07779 * 0.42532 * 5 4 2 29 29 H 0.96993 * 120.55738 * 166.66297 * 6 5 4 30 30 H 1.08997 * 109.82145 * 284.13310 * 7 6 5 31 31 H 1.08992 * 109.82493 * 163.20352 * 7 6 5 32 32 H 1.09007 * 109.62434 * 179.33042 * 8 7 6 33 33 H 1.08995 * 109.62319 * 58.77230 * 8 7 6 34 34 H 1.08997 * 109.19334 * 280.09269 * 9 4 2 35 35 H 0.96997 * 120.00143 * 4.66523 * 12 10 9 36 36 H 1.09000 * 109.47043 * 32.76856 * 13 12 10 37 37 H 1.09001 * 109.46802 * 59.99771 * 14 13 12 38 38 H 1.09000 * 109.46973 * 300.00075 * 15 14 13 39 39 H 1.08997 * 109.46874 * 180.02562 * 15 14 13 40 40 H 1.09001 * 109.47035 * 179.97438 * 16 15 14 41 41 H 1.09000 * 109.47200 * 300.00303 * 17 16 15 42 42 H 1.09000 * 109.47201 * 179.97438 * 17 16 15 43 43 H 1.08994 * 109.47372 * 179.97438 * 18 17 16 44 44 H 1.08999 * 109.47554 * 179.97438 * 19 18 17 45 45 H 1.08997 * 109.47144 * 59.99931 * 19 18 17 46 46 H 0.96703 * 114.00050 * 179.97438 * 21 20 19 47 47 H 1.08997 * 109.47144 * 179.97438 * 22 16 15 48 48 H 1.09006 * 109.47050 * 59.99570 * 22 16 15 49 49 H 1.08997 * 109.47182 * 179.97438 * 23 14 13 50 50 H 1.09001 * 109.47106 * 59.99809 * 23 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.5223 -0.0046 2.1641 6 7 3.0189 -0.5902 3.3220 7 6 2.6248 -1.9691 3.6458 8 6 2.7061 -2.7926 2.3524 9 6 1.7331 -2.1958 1.3329 10 6 1.9746 -2.8254 -0.0149 11 8 3.0807 -3.2284 -0.3065 12 7 0.9613 -2.9406 -0.8960 13 6 1.1700 -3.6434 -2.1644 14 6 1.7076 -2.6627 -3.2085 15 6 1.9250 -3.3966 -4.5333 16 6 0.5957 -3.9792 -5.0176 17 6 0.0581 -4.9599 -3.9735 18 6 -0.1592 -4.2261 -2.6487 19 6 -1.1682 -3.0941 -2.8523 20 6 -0.6307 -2.1134 -3.8964 21 8 -1.5733 -1.0564 -4.0870 22 6 -0.4133 -2.8472 -5.2212 23 6 0.6983 -1.5311 -3.4125 24 1 -0.3933 0.4417 -0.7650 25 1 1.7923 -0.5139 -0.8899 26 1 1.5615 2.4679 1.2085 27 1 3.5347 1.7701 -0.0321 28 1 2.6260 1.0619 2.0293 29 1 3.6158 -0.0977 3.9067 30 1 1.6043 -1.9817 4.0284 31 1 3.3047 -2.3827 4.3905 32 1 2.4307 -3.8269 2.5591 33 1 3.7208 -2.7532 1.9565 34 1 0.7099 -2.3999 1.6483 35 1 0.0939 -2.5582 -0.6904 36 1 1.8891 -4.4496 -2.0190 37 1 2.6543 -2.2473 -2.8632 38 1 2.6438 -4.2030 -4.3883 39 1 2.3083 -2.6980 -5.2770 40 1 0.7504 -4.5017 -5.9617 41 1 0.7770 -5.7663 -3.8285 42 1 -0.8891 -5.3747 -4.3183 43 1 -0.5426 -4.9246 -1.9050 44 1 -1.3234 -2.5715 -1.9084 45 1 -2.1152 -3.5091 -3.1974 46 1 -1.2973 -0.3957 -4.7369 47 1 -1.3601 -3.2622 -5.5667 48 1 -0.0302 -2.1485 -5.9650 49 1 1.0815 -0.8322 -4.1560 50 1 0.5431 -1.0081 -2.4688 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_15608500.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:03:41 Heat of formation + Delta-G solvation = -106.021835 kcal Electronic energy + Delta-G solvation = -32757.501341 eV Core-core repulsion = 28749.990499 eV Total energy + Delta-G solvation = -4007.510842 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.193 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.84556 -41.22322 -39.26622 -37.51688 -37.36818 -35.64250 -33.74483 -33.69982 -32.98030 -32.22166 -31.36940 -27.60879 -26.95197 -26.66894 -25.51600 -23.25689 -22.87056 -22.56577 -22.26954 -21.21110 -19.42602 -18.92372 -18.59816 -18.46360 -17.92497 -17.72868 -16.93417 -16.74963 -15.83563 -15.70318 -15.68388 -15.34201 -15.20768 -15.13906 -14.83655 -14.75933 -14.69004 -14.47732 -14.14119 -14.07506 -13.76206 -13.71099 -13.61138 -13.49014 -13.25418 -12.94533 -12.88856 -12.38863 -12.09109 -12.05431 -11.97417 -11.87539 -11.85464 -11.69182 -11.55914 -11.48056 -11.19095 -10.80330 -10.73147 -10.35668 -10.19218 -9.92803 -8.61103 -4.99560 1.07424 1.28728 1.57538 1.63692 1.89246 2.22928 2.47740 3.19528 3.44235 3.48352 3.51560 3.57000 3.71243 3.86774 3.92451 3.95816 4.03623 4.07911 4.15225 4.19110 4.20261 4.22229 4.26275 4.29085 4.33707 4.37198 4.44577 4.54609 4.61786 4.66740 4.68469 4.73480 4.75543 4.78274 4.99493 5.03467 5.05404 5.05946 5.07210 5.09323 5.15909 5.16283 5.21131 5.29459 5.34189 5.41794 5.46303 5.52243 5.58362 6.13999 6.54364 6.75060 6.92331 6.97672 7.24693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.053 4.053 3 Si 0.750 3.250 4 C -0.243 4.243 5 C 0.135 3.865 6 N -0.749 5.749 7 C 0.124 3.876 8 C -0.126 4.126 9 C -0.036 4.036 10 C 0.529 3.471 11 O -0.581 6.581 12 N -0.707 5.707 13 C 0.155 3.845 14 C -0.090 4.090 15 C -0.108 4.108 16 C -0.082 4.082 17 C -0.109 4.109 18 C -0.084 4.084 19 C -0.099 4.099 20 C 0.142 3.858 21 O -0.571 6.571 22 C -0.135 4.135 23 C -0.134 4.134 24 H 0.393 0.607 25 H 0.062 0.938 26 H -0.283 1.283 27 H -0.301 1.301 28 H 0.122 0.878 29 H 0.411 0.589 30 H 0.070 0.930 31 H 0.104 0.896 32 H 0.087 0.913 33 H 0.059 0.941 34 H 0.100 0.900 35 H 0.412 0.588 36 H 0.066 0.934 37 H 0.054 0.946 38 H 0.058 0.942 39 H 0.073 0.927 40 H 0.082 0.918 41 H 0.067 0.933 42 H 0.078 0.922 43 H 0.085 0.915 44 H 0.069 0.931 45 H 0.072 0.928 46 H 0.390 0.610 47 H 0.068 0.932 48 H 0.074 0.926 49 H 0.077 0.923 50 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.065 1.523 -2.056 3.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.164 4.164 3 Si 0.658 3.342 4 C -0.254 4.254 5 C 0.013 3.987 6 N -0.379 5.379 7 C 0.000 4.000 8 C -0.164 4.164 9 C -0.057 4.057 10 C 0.317 3.683 11 O -0.461 6.461 12 N -0.359 5.359 13 C 0.051 3.949 14 C -0.109 4.109 15 C -0.146 4.146 16 C -0.101 4.101 17 C -0.147 4.147 18 C -0.103 4.103 19 C -0.137 4.137 20 C 0.102 3.898 21 O -0.379 6.379 22 C -0.173 4.173 23 C -0.171 4.171 24 H 0.243 0.757 25 H 0.080 0.920 26 H -0.211 1.211 27 H -0.229 1.229 28 H 0.139 0.861 29 H 0.247 0.753 30 H 0.088 0.912 31 H 0.122 0.878 32 H 0.106 0.894 33 H 0.078 0.922 34 H 0.118 0.882 35 H 0.250 0.750 36 H 0.085 0.915 37 H 0.072 0.928 38 H 0.077 0.923 39 H 0.092 0.908 40 H 0.100 0.900 41 H 0.085 0.915 42 H 0.096 0.904 43 H 0.103 0.897 44 H 0.088 0.912 45 H 0.090 0.910 46 H 0.240 0.760 47 H 0.087 0.913 48 H 0.093 0.907 49 H 0.096 0.904 50 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -2.132 1.024 -0.811 2.500 hybrid contribution 0.639 0.147 0.137 0.670 sum -1.493 1.171 -0.674 2.013 Atomic orbital electron populations 1.86457 1.17035 1.81988 1.50596 1.24500 0.85891 1.09193 0.96824 0.94571 0.77275 0.77017 0.85369 1.19817 1.14013 0.93643 0.97969 1.20359 0.95157 0.95639 0.87558 1.44602 1.53725 1.15578 1.24025 1.21710 1.01514 0.80703 0.96110 1.21796 0.99404 0.99918 0.95309 1.19682 1.01604 0.92220 0.92218 1.20687 0.83977 0.77236 0.86442 1.90669 1.25017 1.50997 1.79443 1.46142 1.14626 1.57125 1.18025 1.20923 0.97307 0.94008 0.82699 1.21310 0.98226 0.96065 0.95335 1.21550 0.97245 0.99861 0.95939 1.21042 0.94276 0.95822 0.98950 1.21574 1.02086 0.97525 0.93527 1.21279 0.93485 0.97039 0.98465 1.21417 0.98405 0.95179 0.98709 1.20945 0.87587 0.86980 0.94304 1.86526 1.47118 1.38382 1.65886 1.22187 0.99604 0.98188 0.97308 1.22196 0.94753 0.97526 1.02666 0.75699 0.92024 1.21065 1.22855 0.86118 0.75329 0.91213 0.87778 0.89445 0.92191 0.88186 0.75004 0.91531 0.92782 0.92285 0.90842 0.89975 0.91464 0.90355 0.89715 0.91197 0.90964 0.76034 0.91345 0.90732 0.90400 0.90688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.83 12.57 -148.98 -1.87 -1.04 16 2 C -0.05 -0.07 2.15 71.24 0.15 0.08 16 3 Si 0.75 0.13 29.90 68.60 2.05 2.18 16 4 C -0.24 -1.32 5.07 -16.75 -0.08 -1.40 16 5 C 0.14 0.71 9.62 83.42 0.80 1.51 16 6 N -0.75 -1.22 5.83 -345.91 -2.02 -3.24 16 7 C 0.12 -0.07 7.16 86.46 0.62 0.55 16 8 C -0.13 -0.47 5.24 30.79 0.16 -0.31 16 9 C -0.04 -0.17 2.69 -12.43 -0.03 -0.21 16 10 C 0.53 3.99 5.55 87.66 0.49 4.47 16 11 O -0.58 -9.06 15.61 -3.05 -0.05 -9.10 16 12 N -0.71 -1.43 3.67 -442.52 -1.62 -3.05 16 13 C 0.16 0.26 2.05 44.99 0.09 0.36 16 14 C -0.09 -0.06 2.90 -10.79 -0.03 -0.09 16 15 C -0.11 0.13 5.19 30.60 0.16 0.29 16 16 C -0.08 0.27 3.19 -10.79 -0.03 0.23 16 17 C -0.11 0.31 5.19 30.59 0.16 0.47 16 18 C -0.08 0.16 2.89 -10.79 -0.03 0.13 16 19 C -0.10 0.22 4.67 30.59 0.14 0.36 16 20 C 0.14 -0.48 1.15 -10.81 -0.01 -0.49 16 21 O -0.57 1.63 12.98 -148.98 -1.93 -0.31 16 22 C -0.14 0.53 4.81 30.59 0.15 0.68 16 23 C -0.13 0.43 4.65 30.58 0.14 0.58 16 24 H 0.39 -3.68 8.74 -74.06 -0.65 -4.33 16 25 H 0.06 0.13 5.42 -2.39 -0.01 0.11 16 26 H -0.28 -1.50 6.90 99.48 0.69 -0.82 16 27 H -0.30 -2.21 7.11 99.48 0.71 -1.51 16 28 H 0.12 0.59 4.34 -2.91 -0.01 0.57 16 29 H 0.41 -0.96 8.96 -92.71 -0.83 -1.79 16 30 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 31 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 32 H 0.09 0.14 8.14 -2.38 -0.02 0.12 16 33 H 0.06 0.56 7.48 -2.39 -0.02 0.54 16 34 H 0.10 0.27 8.14 -2.39 -0.02 0.25 16 35 H 0.41 -0.21 6.57 -92.71 -0.61 -0.82 16 36 H 0.07 0.44 7.58 -2.39 -0.02 0.42 16 37 H 0.05 0.32 8.14 -2.39 -0.02 0.30 16 38 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 39 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 40 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 41 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 42 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 43 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 44 H 0.07 -0.14 6.50 -2.39 -0.02 -0.16 16 45 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 46 H 0.39 -3.71 9.05 -74.05 -0.67 -4.38 16 47 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 48 H 0.07 -0.40 8.14 -2.38 -0.02 -0.42 16 49 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 50 H 0.07 -0.25 6.31 -2.39 -0.02 -0.26 16 Total: 0.00 -17.73 361.82 -4.35 -22.09 By element: Atomic # 1 Polarization: -12.98 SS G_CDS: -1.75 Total: -14.73 kcal Atomic # 6 Polarization: 4.37 SS G_CDS: 2.84 Total: 7.21 kcal Atomic # 7 Polarization: -2.65 SS G_CDS: -3.64 Total: -6.29 kcal Atomic # 8 Polarization: -6.60 SS G_CDS: -3.85 Total: -10.45 kcal Atomic # 14 Polarization: 0.13 SS G_CDS: 2.05 Total: 2.18 kcal Total: -17.73 -4.35 -22.09 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_15608500.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.935 kcal (2) G-P(sol) polarization free energy of solvation -17.732 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.667 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.355 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.087 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.022 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds