Wall clock time and date at job start Thu Mar 4 2021 18:04:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47273 * 2 1 4 4 C 1.50698 * 109.47093 * 239.99835 * 2 1 3 5 5 C 1.38254 * 119.94088 * 120.02269 * 4 2 1 6 6 C 1.38169 * 120.05068 * 179.72643 * 5 4 2 7 7 C 1.38708 * 119.94709 * 0.52752 * 6 5 4 8 8 O 1.35902 * 120.05924 * 179.74564 * 7 6 5 9 9 C 1.42902 * 116.99613 * 359.72653 * 8 7 6 10 10 C 1.50703 * 109.46962 * 179.97438 * 9 8 7 11 11 O 1.21284 * 119.99942 * 359.97438 * 10 9 8 12 12 N 1.34773 * 119.99837 * 180.02562 * 10 9 8 13 13 C 1.46499 * 120.00031 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47695 * 204.99801 * 13 12 10 15 15 C 1.52997 * 109.47457 * 179.97438 * 14 13 12 16 16 C 1.53002 * 109.46817 * 60.00169 * 15 14 13 17 17 C 1.52996 * 109.47346 * 299.99737 * 16 15 14 18 18 C 1.53002 * 109.46891 * 59.99997 * 17 16 15 19 19 C 1.52997 * 109.46978 * 60.00410 * 18 17 16 20 20 C 1.53006 * 109.47164 * 299.99874 * 19 18 17 21 21 O 1.42895 * 109.47000 * 180.02562 * 20 19 18 22 22 C 1.52997 * 109.47127 * 59.99836 * 20 19 18 23 23 C 1.52999 * 109.46623 * 299.99900 * 20 19 18 24 24 C 1.38755 * 119.88648 * 359.47405 * 7 6 5 25 25 N 1.48003 * 120.02744 * 180.22981 * 24 7 6 26 26 O 1.21801 * 120.00077 * 180.02562 * 25 24 7 27 27 O 1.21807 * 120.00327 * 359.97438 * 25 24 7 28 28 C 1.38122 * 119.94523 * 0.25102 * 24 7 6 29 29 H 0.96706 * 113.99913 * 59.99867 * 1 2 3 30 30 H 1.09001 * 109.47311 * 120.00355 * 2 1 3 31 31 H 1.48501 * 109.99726 * 60.00307 * 3 2 1 32 32 H 1.48499 * 110.00220 * 181.31988 * 3 2 1 33 33 H 1.07995 * 119.97179 * 359.97438 * 5 4 2 34 34 H 1.08005 * 120.02749 * 180.25555 * 6 5 4 35 35 H 1.09002 * 109.47135 * 59.99953 * 9 8 7 36 36 H 1.08995 * 109.47240 * 299.99961 * 9 8 7 37 37 H 0.96998 * 120.00452 * 359.97438 * 12 10 9 38 38 H 1.09004 * 109.47041 * 324.99924 * 13 12 10 39 39 H 1.09001 * 109.46989 * 59.99548 * 14 13 12 40 40 H 1.08993 * 109.47194 * 299.99651 * 15 14 13 41 41 H 1.09002 * 109.46695 * 179.97438 * 15 14 13 42 42 H 1.09004 * 109.46733 * 179.97438 * 16 15 14 43 43 H 1.08992 * 109.47554 * 180.02562 * 17 16 15 44 44 H 1.09004 * 109.47108 * 300.00289 * 17 16 15 45 45 H 1.09002 * 109.47097 * 180.02562 * 18 17 16 46 46 H 1.09000 * 109.47140 * 179.97438 * 19 18 17 47 47 H 1.09001 * 109.47375 * 59.99908 * 19 18 17 48 48 H 0.96696 * 114.00485 * 299.99339 * 21 20 19 49 49 H 1.09002 * 109.47153 * 180.02562 * 22 20 19 50 50 H 1.09001 * 109.46832 * 60.00321 * 22 20 19 51 51 H 1.09000 * 109.47486 * 299.99829 * 23 20 19 52 52 H 1.09002 * 109.46716 * 179.97438 * 23 20 19 53 53 H 1.08002 * 119.97403 * 179.97438 * 28 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7264 -0.0375 -2.1395 6 6 3.1929 -0.6883 -3.2655 7 6 2.8538 -2.0146 -3.4891 8 8 3.3071 -2.6554 -4.5985 9 6 4.1240 -1.9003 -5.4955 10 6 4.5297 -2.7694 -6.6579 11 8 4.1565 -3.9221 -6.7125 12 7 5.3081 -2.2661 -7.6362 13 6 5.7030 -3.1111 -8.7659 14 6 7.0064 -2.5819 -9.3676 15 6 7.4191 -3.4648 -10.5470 16 6 6.3197 -3.4413 -11.6108 17 6 5.0164 -3.9706 -11.0092 18 6 4.6037 -3.0877 -9.8297 19 6 4.3949 -1.6521 -10.3159 20 6 5.6983 -1.1228 -10.9176 21 8 5.5035 0.2182 -11.3711 22 6 6.1110 -2.0057 -12.0970 23 6 6.7976 -1.1462 -9.8537 24 6 2.0556 -2.6877 -2.5752 25 7 1.6961 -4.1044 -2.8081 26 8 0.9950 -4.6946 -2.0058 27 8 2.1005 -4.6798 -3.8025 28 6 1.5965 -2.0343 -1.4482 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5139 0.8900 31 1 1.5615 2.4678 1.2086 32 1 3.5346 1.7703 -0.0321 33 1 2.9864 0.9964 -1.9672 34 1 3.8174 -0.1635 -3.9733 35 1 5.0154 -1.5550 -4.9719 36 1 3.5625 -1.0411 -5.8624 37 1 5.6069 -1.3443 -7.5924 38 1 5.8516 -4.1340 -8.4199 39 1 7.7897 -2.5989 -8.6098 40 1 7.5679 -4.4875 -10.2007 41 1 8.3474 -3.0874 -10.9759 42 1 6.6140 -4.0700 -12.4513 43 1 4.2333 -3.9543 -11.7671 44 1 5.1651 -4.9934 -10.6628 45 1 3.6754 -3.4650 -9.4008 46 1 4.1005 -1.0232 -9.4757 47 1 3.6117 -1.6354 -11.0738 48 1 4.8192 0.3090 -12.0483 49 1 7.0398 -1.6289 -12.5254 50 1 5.3278 -1.9890 -12.8549 51 1 6.5036 -0.5172 -9.0135 52 1 7.7262 -0.7696 -10.2825 53 1 0.9748 -2.5577 -0.7368 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_4549638.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:04:37 Heat of formation + Delta-G solvation = -128.110206 kcal Electronic energy + Delta-G solvation = -40002.292868 eV Core-core repulsion = 34808.636823 eV Total energy + Delta-G solvation = -5193.656045 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.176 amu Computer time = 2.00 seconds Orbital eigenvalues (eV) -43.30416 -42.86319 -41.72240 -40.50298 -39.36172 -37.60142 -37.49495 -37.33353 -35.79053 -33.75141 -33.51731 -32.64247 -32.21812 -31.64057 -29.72757 -27.83318 -26.97692 -26.81246 -26.24535 -24.13962 -23.03346 -22.82579 -22.50187 -22.31414 -21.26324 -20.51993 -19.78388 -19.34020 -18.96945 -18.64837 -18.34060 -18.13390 -17.78332 -17.59145 -17.19332 -16.78850 -16.33841 -16.09310 -15.95906 -15.87490 -15.66914 -15.42888 -15.24216 -15.22923 -14.85522 -14.73856 -14.61033 -14.29383 -14.05106 -13.89217 -13.73003 -13.68808 -13.52392 -13.33566 -13.24354 -13.00575 -12.71543 -12.40292 -12.28781 -12.26284 -12.20195 -12.15894 -12.03952 -11.95194 -11.91839 -11.89680 -11.58563 -11.24352 -11.00641 -10.84874 -10.78230 -10.57033 -10.43645 -10.07846 -9.79909 -4.99900 -1.32438 -0.25399 0.14663 0.34343 1.19457 1.26842 1.45240 1.63717 2.01547 2.04528 2.30558 3.10576 3.13070 3.23170 3.37933 3.41448 3.46529 3.50609 3.61409 3.70249 3.78846 3.81458 3.88750 3.90315 3.97288 3.98569 4.10952 4.15593 4.18117 4.23035 4.26756 4.28740 4.32101 4.35075 4.50041 4.57935 4.62287 4.66064 4.68306 4.71218 4.82851 4.94718 4.98568 5.00133 5.03287 5.05791 5.06397 5.11391 5.16892 5.18215 5.28697 5.32734 5.41089 5.47054 5.47822 5.74416 6.40735 6.42238 6.72947 6.86205 7.13529 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.082 4.082 3 Si 0.799 3.201 4 C -0.150 4.150 5 C -0.004 4.004 6 C -0.189 4.189 7 C 0.193 3.807 8 O -0.290 6.290 9 C 0.024 3.976 10 C 0.509 3.491 11 O -0.562 6.562 12 N -0.703 5.703 13 C 0.159 3.841 14 C -0.081 4.081 15 C -0.111 4.111 16 C -0.084 4.084 17 C -0.110 4.110 18 C -0.091 4.091 19 C -0.129 4.129 20 C 0.137 3.863 21 O -0.574 6.574 22 C -0.136 4.136 23 C -0.099 4.099 24 C -0.104 4.104 25 N 0.034 4.966 26 O -0.203 6.203 27 O -0.174 6.174 28 C -0.003 4.003 29 H 0.398 0.602 30 H 0.110 0.890 31 H -0.306 1.306 32 H -0.264 1.264 33 H 0.189 0.811 34 H 0.205 0.795 35 H 0.142 0.858 36 H 0.144 0.856 37 H 0.417 0.583 38 H 0.069 0.931 39 H 0.096 0.904 40 H 0.067 0.933 41 H 0.081 0.919 42 H 0.080 0.920 43 H 0.068 0.932 44 H 0.060 0.940 45 H 0.053 0.947 46 H 0.072 0.928 47 H 0.067 0.933 48 H 0.389 0.611 49 H 0.070 0.930 50 H 0.068 0.932 51 H 0.080 0.920 52 H 0.076 0.924 53 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.313 13.746 -4.488 15.405 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.190 4.190 3 Si 0.702 3.298 4 C -0.151 4.151 5 C -0.022 4.022 6 C -0.208 4.208 7 C 0.143 3.857 8 O -0.201 6.201 9 C -0.053 4.053 10 C 0.295 3.705 11 O -0.439 6.439 12 N -0.358 5.358 13 C 0.054 3.946 14 C -0.100 4.100 15 C -0.149 4.149 16 C -0.102 4.102 17 C -0.148 4.148 18 C -0.111 4.111 19 C -0.167 4.167 20 C 0.097 3.903 21 O -0.382 6.382 22 C -0.173 4.173 23 C -0.136 4.136 24 C -0.190 4.190 25 N 0.544 4.456 26 O -0.410 6.410 27 O -0.388 6.388 28 C -0.022 4.022 29 H 0.248 0.752 30 H 0.127 0.873 31 H -0.234 1.234 32 H -0.190 1.190 33 H 0.205 0.795 34 H 0.222 0.778 35 H 0.160 0.840 36 H 0.161 0.839 37 H 0.256 0.744 38 H 0.087 0.913 39 H 0.114 0.886 40 H 0.086 0.914 41 H 0.099 0.901 42 H 0.099 0.901 43 H 0.087 0.913 44 H 0.078 0.922 45 H 0.071 0.929 46 H 0.091 0.909 47 H 0.085 0.915 48 H 0.238 0.762 49 H 0.089 0.911 50 H 0.087 0.913 51 H 0.098 0.902 52 H 0.094 0.906 53 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 6.205 13.722 -3.092 15.374 hybrid contribution -0.859 -1.657 -0.116 1.870 sum 5.346 12.065 -3.208 13.581 Atomic orbital electron populations 1.86529 1.17228 1.82212 1.50633 1.25474 0.85491 1.12043 0.95996 0.93797 0.77965 0.72559 0.85441 1.20460 1.02108 0.92665 0.99901 1.21720 0.89443 1.01163 0.89842 1.21810 1.06001 0.90549 1.02401 1.18968 0.89649 0.92073 0.84967 1.86474 1.63582 1.39684 1.30311 1.23124 0.98108 0.94566 0.89529 1.20478 0.78616 0.87681 0.83763 1.90848 1.54725 1.20041 1.78281 1.45774 1.51618 1.16647 1.21739 1.20898 0.94062 0.94692 0.84926 1.21285 0.95738 0.94781 0.98193 1.21590 0.98552 1.00007 0.94753 1.21052 0.94807 0.96156 0.98206 1.21556 0.97769 0.98623 0.96878 1.21323 0.98086 0.96067 0.95628 1.22121 0.97786 0.95440 1.01344 1.21056 0.94220 0.81449 0.93559 1.86504 1.62496 1.27467 1.61718 1.22185 1.02417 0.95047 0.97699 1.21451 0.98426 0.95832 0.97918 1.20861 1.13450 0.81526 1.03116 1.43902 0.98217 1.03992 0.99450 1.94503 1.35981 1.68344 1.42196 1.94680 1.56415 1.69360 1.18301 1.20839 0.94163 0.94779 0.92454 0.75182 0.87278 1.23408 1.18975 0.79475 0.77777 0.84004 0.83888 0.74370 0.91291 0.88556 0.91392 0.90061 0.90134 0.91343 0.92154 0.92854 0.90904 0.91471 0.76161 0.91084 0.91299 0.90199 0.90550 0.83225 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.97 12.77 -148.98 -1.90 0.06 16 2 C -0.08 0.50 2.82 71.24 0.20 0.70 16 3 Si 0.80 -8.15 29.78 68.60 2.04 -6.11 16 4 C -0.15 0.85 5.39 -19.85 -0.11 0.74 16 5 C 0.00 0.05 8.66 22.26 0.19 0.24 16 6 C -0.19 2.03 9.04 22.37 0.20 2.24 16 7 C 0.19 0.11 6.67 22.51 0.15 0.26 16 8 O -0.29 -1.31 7.68 -63.43 -0.49 -1.80 16 9 C 0.02 -0.17 5.22 71.24 0.37 0.21 16 10 C 0.51 0.59 7.87 87.66 0.69 1.28 16 11 O -0.56 -8.17 16.16 15.99 0.26 -7.91 16 12 N -0.70 3.78 4.24 -442.53 -1.87 1.90 16 13 C 0.16 -0.30 2.05 44.99 0.09 -0.21 16 14 C -0.08 0.48 2.88 -10.79 -0.03 0.45 16 15 C -0.11 0.56 5.19 30.59 0.16 0.71 16 16 C -0.08 0.34 3.19 -10.79 -0.03 0.30 16 17 C -0.11 0.15 5.19 30.59 0.16 0.31 16 18 C -0.09 0.06 2.88 -10.79 -0.03 0.03 16 19 C -0.13 0.52 4.66 30.60 0.14 0.67 16 20 C 0.14 -0.67 1.15 -10.79 -0.01 -0.68 16 21 O -0.57 1.94 12.98 -148.98 -1.93 0.01 16 22 C -0.14 0.63 4.82 30.59 0.15 0.78 16 23 C -0.10 0.64 4.67 30.60 0.14 0.78 16 24 C -0.10 -0.74 6.87 36.47 0.25 -0.49 16 25 N 0.03 0.58 4.45 -46.24 -0.21 0.38 16 26 O -0.20 -3.84 18.45 18.88 0.35 -3.49 16 27 O -0.17 -3.80 17.24 25.60 0.44 -3.36 16 28 C 0.00 -0.01 9.11 22.25 0.20 0.20 16 29 H 0.40 -4.86 8.70 -74.05 -0.64 -5.51 16 30 H 0.11 -0.45 7.96 -2.39 -0.02 -0.47 16 31 H -0.31 0.11 7.11 99.48 0.71 0.82 16 32 H -0.26 2.16 7.11 99.48 0.71 2.87 16 33 H 0.19 -3.63 4.87 -2.91 -0.01 -3.64 16 34 H 0.21 -4.22 6.30 -2.91 -0.02 -4.24 16 35 H 0.14 -2.20 7.65 -2.39 -0.02 -2.22 16 36 H 0.14 -2.24 7.67 -2.39 -0.02 -2.26 16 37 H 0.42 -5.21 6.87 -92.71 -0.64 -5.85 16 38 H 0.07 0.27 7.58 -2.38 -0.02 0.25 16 39 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 40 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 41 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 42 H 0.08 -0.35 8.14 -2.39 -0.02 -0.36 16 43 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 44 H 0.06 0.04 8.14 -2.38 -0.02 0.02 16 45 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 46 H 0.07 -0.35 7.61 -2.39 -0.02 -0.36 16 47 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 48 H 0.39 -3.52 9.05 -74.06 -0.67 -4.19 16 49 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 50 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 51 H 0.08 -0.73 6.51 -2.39 -0.02 -0.75 16 52 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 53 H 0.15 0.61 7.61 -2.91 -0.02 0.59 16 Total: 0.00 -38.56 414.23 -1.34 -39.90 By element: Atomic # 1 Polarization: -27.22 SS G_CDS: -0.91 Total: -28.13 kcal Atomic # 6 Polarization: 5.64 SS G_CDS: 2.89 Total: 8.53 kcal Atomic # 7 Polarization: 4.36 SS G_CDS: -2.08 Total: 2.28 kcal Atomic # 8 Polarization: -13.20 SS G_CDS: -3.27 Total: -16.47 kcal Atomic # 14 Polarization: -8.15 SS G_CDS: 2.04 Total: -6.11 kcal Total: -38.56 -1.34 -39.90 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_4549638.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.213 kcal (2) G-P(sol) polarization free energy of solvation -38.561 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.773 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.337 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.898 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.00 seconds