Wall clock time and date at job start Thu Mar 4 2021 18:04:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35988 * 116.99686 * 2 1 4 4 C 1.38677 * 119.99749 * 179.97438 * 3 2 1 5 5 C 1.38157 * 119.99827 * 180.02562 * 4 3 2 6 6 C 1.50702 * 119.99844 * 179.97438 * 5 4 3 7 7 O 1.42901 * 109.46904 * 255.02414 * 6 5 4 8 8 Si 1.86294 * 109.47243 * 15.02368 * 6 5 4 9 9 C 1.38674 * 119.99900 * 0.02562 * 5 4 3 10 10 O 1.35985 * 119.99864 * 180.02562 * 9 5 4 11 11 C 1.42902 * 116.99810 * 179.97438 * 10 9 5 12 12 C 1.50703 * 109.46962 * 179.97438 * 11 10 9 13 13 O 1.21284 * 119.99942 * 359.97438 * 12 11 10 14 14 N 1.34773 * 119.99837 * 180.02562 * 12 11 10 15 15 C 1.46499 * 120.00031 * 179.97438 * 14 12 11 16 16 C 1.52997 * 109.47695 * 204.99801 * 15 14 12 17 17 C 1.52997 * 109.47457 * 179.97438 * 16 15 14 18 18 C 1.53002 * 109.46817 * 60.00169 * 17 16 15 19 19 C 1.52996 * 109.47346 * 299.99737 * 18 17 16 20 20 C 1.53002 * 109.46891 * 59.99997 * 19 18 17 21 21 C 1.52997 * 109.46978 * 60.00410 * 20 19 18 22 22 C 1.53006 * 109.47164 * 299.99874 * 21 20 19 23 23 O 1.42895 * 109.47000 * 180.02562 * 22 21 20 24 24 C 1.52997 * 109.47127 * 59.99836 * 22 21 20 25 25 C 1.52999 * 109.46623 * 299.99900 * 22 21 20 26 26 C 1.38718 * 120.00180 * 0.26966 * 9 5 4 27 27 C 1.38117 * 120.00048 * 359.45595 * 26 9 5 28 28 H 1.08992 * 109.47298 * 300.00058 * 1 2 3 29 29 H 1.09008 * 109.46857 * 60.00718 * 1 2 3 30 30 H 1.09000 * 109.46731 * 179.97438 * 1 2 3 31 31 H 1.08001 * 120.00331 * 0.04486 * 4 3 2 32 32 H 1.08998 * 109.46558 * 135.02694 * 6 5 4 33 33 H 0.96704 * 114.00150 * 300.00125 * 7 6 5 34 34 H 1.48507 * 110.00134 * 298.68161 * 8 6 5 35 35 H 1.48501 * 109.99913 * 59.99932 * 8 6 5 36 36 H 1.09002 * 109.47135 * 60.00035 * 11 10 9 37 37 H 1.08995 * 109.47240 * 300.00042 * 11 10 9 38 38 H 0.96998 * 120.00452 * 359.97438 * 14 12 11 39 39 H 1.09004 * 109.47041 * 324.99924 * 15 14 12 40 40 H 1.09001 * 109.46989 * 59.99548 * 16 15 14 41 41 H 1.08993 * 109.47194 * 299.99651 * 17 16 15 42 42 H 1.09002 * 109.46695 * 179.97438 * 17 16 15 43 43 H 1.09004 * 109.46733 * 179.97438 * 18 17 16 44 44 H 1.08992 * 109.47554 * 180.02562 * 19 18 17 45 45 H 1.09004 * 109.47108 * 300.00289 * 19 18 17 46 46 H 1.09002 * 109.47097 * 180.02562 * 20 19 18 47 47 H 1.09000 * 109.47140 * 179.97438 * 21 20 19 48 48 H 1.09001 * 109.47375 * 59.99908 * 21 20 19 49 49 H 0.96696 * 114.00485 * 299.99339 * 23 22 21 50 50 H 1.09002 * 109.47153 * 180.02562 * 24 22 21 51 51 H 1.09001 * 109.46832 * 60.00321 * 24 22 21 52 52 H 1.09000 * 109.47486 * 299.99829 * 25 22 21 53 53 H 1.09002 * 109.46716 * 179.97438 * 25 22 21 54 54 H 1.08000 * 120.00070 * 179.70149 * 26 9 5 55 55 H 1.07995 * 120.00107 * 180.25240 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 0.0005 5 6 4.0583 2.5153 0.0011 6 6 5.5633 2.5942 0.0022 7 8 6.0197 2.9668 1.3041 8 14 6.2726 0.9327 -0.4526 9 6 3.3030 3.6783 0.0016 10 8 3.9203 4.8899 0.0016 11 6 3.0803 6.0460 0.0016 12 6 3.9344 7.2876 0.0022 13 8 5.1435 7.1918 0.0031 14 7 3.3547 8.5042 0.0029 15 6 4.1850 9.7112 0.0041 16 6 3.3969 10.8720 0.6141 17 6 4.2643 12.1323 0.6159 18 6 4.6580 12.4824 -0.8205 19 6 5.4463 11.3218 -1.4306 20 6 4.5788 10.0614 -1.4324 21 6 3.3170 10.3119 -2.2605 22 6 2.5287 11.4727 -1.6504 23 8 1.3498 11.7062 -2.4235 24 6 3.3961 12.7330 -1.6486 25 6 2.1349 11.1225 -0.2140 26 6 1.9177 3.6056 0.0073 27 6 1.2907 2.3750 0.0010 28 1 -0.3633 0.5138 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 4.0194 0.3786 0.0002 32 1 5.8885 3.3393 -0.7238 33 1 5.6888 3.8236 1.6067 34 1 5.8625 -0.0857 0.5475 35 1 5.8054 0.5338 -1.8045 36 1 2.4510 6.0379 0.8916 37 1 2.4510 6.0379 -0.8883 38 1 2.3878 8.5808 0.0025 39 1 5.0843 9.5330 0.5938 40 1 3.1167 10.6227 1.6376 41 1 5.1632 11.9539 1.2059 42 1 3.7025 12.9594 1.0501 43 1 5.2756 13.3806 -0.8193 44 1 5.7271 11.5713 -2.4538 45 1 6.3453 11.1433 -0.8407 46 1 5.1406 9.2343 -1.8666 47 1 2.6992 9.4138 -2.2621 48 1 3.5975 10.5613 -3.2838 49 1 1.5238 11.9338 -3.3471 50 1 2.8346 13.5599 -1.2136 51 1 3.6766 12.9824 -2.6719 52 1 1.5170 10.2246 -0.2153 53 1 1.5737 11.9496 0.2208 54 1 1.3295 4.5114 0.0126 55 1 0.2122 2.3185 0.0013 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_4974302.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:04:57 Heat of formation + Delta-G solvation = -167.389025 kcal Electronic energy + Delta-G solvation = -38165.448379 eV Core-core repulsion = 33326.885702 eV Total energy + Delta-G solvation = -4838.562678 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.197 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -42.88222 -41.89702 -40.71656 -39.83865 -38.19971 -37.47400 -37.01220 -35.79453 -33.76875 -32.97370 -32.63315 -31.73691 -31.01609 -29.41521 -28.10298 -26.99434 -26.65889 -26.46128 -23.98832 -22.94295 -22.56542 -22.49437 -22.33299 -21.22730 -19.64394 -19.16152 -18.90973 -18.38751 -18.14336 -17.83056 -17.56895 -17.46001 -16.87138 -16.75778 -16.18199 -15.91454 -15.89067 -15.74515 -15.64740 -15.46058 -15.38000 -15.17128 -14.87610 -14.76492 -14.57446 -14.33367 -14.13280 -13.98830 -13.71731 -13.65117 -13.53905 -13.50782 -13.35919 -13.15324 -13.01744 -12.62629 -12.37346 -12.24187 -12.18130 -12.05886 -11.94158 -11.91139 -11.60435 -11.56726 -11.30591 -11.25584 -11.13797 -10.99171 -10.80250 -10.45755 -10.26530 -10.09289 -8.96180 -4.87971 -0.09586 0.18768 1.30614 1.38892 1.42715 1.58089 1.88588 2.20464 2.39968 2.50445 3.10651 3.36277 3.41038 3.44040 3.48599 3.60350 3.79246 3.81262 3.86821 3.88728 3.95865 3.96248 4.00667 4.01969 4.09311 4.09963 4.14106 4.16679 4.21515 4.24948 4.26012 4.29909 4.31702 4.31834 4.54042 4.56127 4.64757 4.66148 4.67041 4.69497 4.85262 4.92427 4.96275 4.98485 4.98706 5.01400 5.04514 5.05021 5.09566 5.15427 5.25802 5.27596 5.31307 5.39453 5.45681 5.46372 6.03012 6.28023 6.40123 6.52304 6.83047 7.08422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.089 3.911 4 C -0.142 4.142 5 C -0.118 4.118 6 C -0.085 4.085 7 O -0.544 6.544 8 Si 0.812 3.188 9 C 0.097 3.903 10 O -0.308 6.308 11 C 0.035 3.965 12 C 0.516 3.484 13 O -0.562 6.562 14 N -0.706 5.706 15 C 0.159 3.841 16 C -0.082 4.082 17 C -0.110 4.110 18 C -0.084 4.084 19 C -0.109 4.109 20 C -0.090 4.090 21 C -0.130 4.130 22 C 0.136 3.864 23 O -0.576 6.576 24 C -0.135 4.135 25 C -0.100 4.100 26 C -0.155 4.155 27 C -0.159 4.159 28 H 0.069 0.931 29 H 0.070 0.930 30 H 0.115 0.885 31 H 0.125 0.875 32 H 0.078 0.922 33 H 0.372 0.628 34 H -0.286 1.286 35 H -0.267 1.267 36 H 0.125 0.875 37 H 0.120 0.880 38 H 0.415 0.585 39 H 0.074 0.926 40 H 0.095 0.905 41 H 0.071 0.929 42 H 0.080 0.920 43 H 0.082 0.918 44 H 0.069 0.931 45 H 0.064 0.936 46 H 0.056 0.944 47 H 0.067 0.933 48 H 0.067 0.933 49 H 0.389 0.611 50 H 0.070 0.930 51 H 0.069 0.931 52 H 0.075 0.925 53 H 0.075 0.925 54 H 0.173 0.827 55 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.182 5.451 -1.107 8.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.256 6.256 3 C 0.043 3.957 4 C -0.160 4.160 5 C -0.119 4.119 6 C -0.193 4.193 7 O -0.350 6.350 8 Si 0.713 3.287 9 C 0.052 3.948 10 O -0.221 6.221 11 C -0.043 4.043 12 C 0.302 3.698 13 O -0.440 6.440 14 N -0.360 5.360 15 C 0.055 3.945 16 C -0.101 4.101 17 C -0.148 4.148 18 C -0.102 4.102 19 C -0.147 4.147 20 C -0.110 4.110 21 C -0.168 4.168 22 C 0.096 3.904 23 O -0.384 6.384 24 C -0.173 4.173 25 C -0.138 4.138 26 C -0.174 4.174 27 C -0.177 4.177 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.133 0.867 31 H 0.142 0.858 32 H 0.096 0.904 33 H 0.220 0.780 34 H -0.213 1.213 35 H -0.193 1.193 36 H 0.142 0.858 37 H 0.138 0.862 38 H 0.253 0.747 39 H 0.093 0.907 40 H 0.113 0.887 41 H 0.089 0.911 42 H 0.098 0.902 43 H 0.101 0.899 44 H 0.087 0.913 45 H 0.082 0.918 46 H 0.074 0.926 47 H 0.086 0.914 48 H 0.086 0.914 49 H 0.238 0.762 50 H 0.088 0.912 51 H 0.088 0.912 52 H 0.093 0.907 53 H 0.094 0.906 54 H 0.190 0.810 55 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -5.206 3.729 -0.790 6.452 hybrid contribution -1.681 1.130 -0.466 2.078 sum -6.887 4.859 -1.255 8.522 Atomic orbital electron populations 1.23389 0.75978 1.05733 1.02618 1.86081 1.23856 1.26621 1.89004 1.18985 0.91713 0.85612 0.99341 1.20162 0.92850 0.96895 1.06100 1.19560 0.96865 0.90541 1.04949 1.25383 0.91095 1.14221 0.88559 1.86654 1.73928 1.42303 1.32130 0.92501 0.89982 0.69800 0.76391 1.18693 0.91531 0.84322 1.00241 1.86093 1.35224 1.11582 1.89236 1.22746 0.92810 0.82058 1.06678 1.20399 0.88364 0.85210 0.75862 1.90771 1.16282 1.87229 1.49707 1.45831 1.11228 1.04178 1.74733 1.20926 0.94075 0.83425 0.96112 1.21291 0.94758 0.94170 0.99854 1.21586 0.99953 0.96841 0.96435 1.21058 0.96014 0.98351 0.94799 1.21553 0.97793 0.93733 1.01624 1.21325 0.96360 0.97986 0.95349 1.22126 0.96284 0.99097 0.99311 1.21075 0.84317 0.93303 0.91686 1.86508 1.32518 1.92425 1.26922 1.22182 0.96375 0.97761 1.01005 1.21457 0.97009 1.02705 0.92598 1.21458 0.92204 0.99989 1.03711 1.21430 1.01673 0.90696 1.03934 0.91217 0.91169 0.86715 0.85793 0.90381 0.77979 1.21329 1.19265 0.85770 0.86196 0.74703 0.90746 0.88652 0.91051 0.90177 0.89927 0.91270 0.91751 0.92594 0.91387 0.91391 0.76173 0.91157 0.91232 0.90682 0.90633 0.80995 0.81723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.25 10.50 -93.41 -0.98 -3.23 16 3 C 0.09 0.61 6.69 22.49 0.15 0.76 16 4 C -0.14 -1.43 8.59 22.36 0.19 -1.24 16 5 C -0.12 -1.04 5.27 -19.78 -0.10 -1.14 16 6 C -0.09 -0.71 2.33 71.24 0.17 -0.54 16 7 O -0.54 -5.43 12.65 -148.98 -1.89 -7.32 16 8 Si 0.81 4.71 30.40 68.60 2.09 6.80 16 9 C 0.10 0.46 6.62 22.49 0.15 0.61 16 10 O -0.31 -1.36 8.56 -74.34 -0.64 -2.00 16 11 C 0.03 -0.14 5.22 71.24 0.37 0.23 16 12 C 0.52 0.67 7.87 87.66 0.69 1.36 16 13 O -0.56 -6.62 16.16 15.99 0.26 -6.36 16 14 N -0.71 3.07 4.24 -442.53 -1.87 1.20 16 15 C 0.16 -0.33 2.05 44.99 0.09 -0.24 16 16 C -0.08 0.46 2.88 -10.79 -0.03 0.42 16 17 C -0.11 0.58 5.19 30.59 0.16 0.74 16 18 C -0.08 0.37 3.19 -10.79 -0.03 0.33 16 19 C -0.11 0.25 5.19 30.59 0.16 0.41 16 20 C -0.09 0.10 2.88 -10.79 -0.03 0.06 16 21 C -0.13 0.42 4.66 30.60 0.14 0.57 16 22 C 0.14 -0.53 1.15 -10.79 -0.01 -0.54 16 23 O -0.58 1.13 12.98 -148.98 -1.93 -0.80 16 24 C -0.14 0.59 4.82 30.59 0.15 0.74 16 25 C -0.10 0.52 4.67 30.60 0.14 0.66 16 26 C -0.16 0.13 9.03 22.36 0.20 0.34 16 27 C -0.16 -0.09 9.03 22.36 0.20 0.12 16 28 H 0.07 -0.40 7.66 -2.39 -0.02 -0.42 16 29 H 0.07 -0.42 7.66 -2.38 -0.02 -0.43 16 30 H 0.11 -0.67 8.14 -2.39 -0.02 -0.69 16 31 H 0.12 1.43 4.93 -2.91 -0.01 1.41 16 32 H 0.08 0.62 7.82 -2.39 -0.02 0.60 16 33 H 0.37 2.72 8.60 -74.05 -0.64 2.08 16 34 H -0.29 -3.23 6.81 99.48 0.68 -2.55 16 35 H -0.27 -2.22 7.11 99.48 0.71 -1.51 16 36 H 0.12 -1.26 7.65 -2.39 -0.02 -1.28 16 37 H 0.12 -1.14 7.67 -2.39 -0.02 -1.16 16 38 H 0.41 -4.14 6.87 -92.71 -0.64 -4.78 16 39 H 0.07 0.20 7.58 -2.38 -0.02 0.18 16 40 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 41 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 42 H 0.08 -0.50 8.14 -2.39 -0.02 -0.51 16 43 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 44 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 45 H 0.06 -0.06 8.14 -2.38 -0.02 -0.08 16 46 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 47 H 0.07 -0.20 7.61 -2.39 -0.02 -0.22 16 48 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 49 H 0.39 -3.04 9.05 -74.06 -0.67 -3.71 16 50 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 51 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 52 H 0.07 -0.52 6.51 -2.39 -0.02 -0.54 16 53 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 54 H 0.17 -1.57 6.29 -2.91 -0.02 -1.59 16 55 H 0.17 -0.96 6.29 -2.91 -0.02 -0.98 16 Total: 0.00 -23.75 416.44 -2.09 -25.84 By element: Atomic # 1 Polarization: -17.85 SS G_CDS: -0.99 Total: -18.83 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: 3.86 Total: 4.70 kcal Atomic # 7 Polarization: 3.07 SS G_CDS: -1.87 Total: 1.20 kcal Atomic # 8 Polarization: -14.53 SS G_CDS: -5.18 Total: -19.71 kcal Atomic # 14 Polarization: 4.71 SS G_CDS: 2.09 Total: 6.80 kcal Total: -23.75 -2.09 -25.84 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_4974302.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.546 kcal (2) G-P(sol) polarization free energy of solvation -23.754 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.089 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.843 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.389 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds