Wall clock time and date at job start Thu Mar 4 2021 18:05:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35897 * 117.00490 * 2 1 4 4 C 1.38611 * 120.03102 * 180.28193 * 3 2 1 5 5 C 1.38648 * 119.89041 * 180.20950 * 4 3 2 6 6 O 1.35902 * 120.02900 * 179.78600 * 5 4 3 7 7 C 1.42902 * 116.99613 * 359.72451 * 6 5 4 8 8 C 1.50703 * 109.46962 * 179.97438 * 7 6 5 9 9 O 1.21284 * 119.99942 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99837 * 180.02562 * 8 7 6 11 11 C 1.46499 * 120.00031 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47695 * 204.99801 * 11 10 8 13 13 C 1.52997 * 109.47457 * 179.97438 * 12 11 10 14 14 C 1.53002 * 109.46817 * 60.00169 * 13 12 11 15 15 C 1.52996 * 109.47346 * 299.99737 * 14 13 12 16 16 C 1.53002 * 109.46891 * 59.99997 * 15 14 13 17 17 C 1.52997 * 109.46978 * 60.00410 * 16 15 14 18 18 C 1.53006 * 109.47164 * 299.99874 * 17 16 15 19 19 O 1.42895 * 109.47000 * 180.02562 * 18 17 16 20 20 C 1.52997 * 109.47127 * 59.99836 * 18 17 16 21 21 C 1.52999 * 109.46623 * 299.99900 * 18 17 16 22 22 C 1.38752 * 119.94811 * 359.51348 * 5 4 3 23 23 C 1.50699 * 119.97587 * 180.27643 * 22 5 4 24 24 O 1.42906 * 109.46983 * 74.99777 * 23 22 5 25 25 Si 1.86299 * 109.47295 * 194.99711 * 23 22 5 26 26 C 1.38203 * 120.05162 * 0.24948 * 22 5 4 27 27 C 1.38148 * 120.10636 * 359.97438 * 26 22 5 28 28 H 1.09002 * 109.47517 * 59.99472 * 1 2 3 29 29 H 1.09000 * 109.47556 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.46932 * 300.00163 * 1 2 3 31 31 H 1.07996 * 120.05421 * 359.97340 * 4 3 2 32 32 H 1.09002 * 109.47135 * 59.99953 * 7 6 5 33 33 H 1.08995 * 109.47240 * 299.99961 * 7 6 5 34 34 H 0.96998 * 120.00452 * 359.97438 * 10 8 7 35 35 H 1.09004 * 109.47041 * 324.99924 * 11 10 8 36 36 H 1.09001 * 109.46989 * 59.99548 * 12 11 10 37 37 H 1.08993 * 109.47194 * 299.99651 * 13 12 11 38 38 H 1.09002 * 109.46695 * 179.97438 * 13 12 11 39 39 H 1.09004 * 109.46733 * 179.97438 * 14 13 12 40 40 H 1.08992 * 109.47554 * 180.02562 * 15 14 13 41 41 H 1.09004 * 109.47108 * 300.00289 * 15 14 13 42 42 H 1.09002 * 109.47097 * 180.02562 * 16 15 14 43 43 H 1.09000 * 109.47140 * 179.97438 * 17 16 15 44 44 H 1.09001 * 109.47375 * 59.99908 * 17 16 15 45 45 H 0.96696 * 114.00485 * 299.99339 * 19 18 17 46 46 H 1.09002 * 109.47153 * 180.02562 * 20 18 17 47 47 H 1.09001 * 109.46832 * 60.00321 * 20 18 17 48 48 H 1.09000 * 109.47486 * 299.99829 * 21 18 17 49 49 H 1.09002 * 109.46716 * 179.97438 * 21 18 17 50 50 H 1.08996 * 109.47341 * 314.99974 * 23 22 5 51 51 H 0.96696 * 113.99573 * 60.00181 * 24 23 22 52 52 H 1.48494 * 110.00228 * 179.97438 * 25 23 22 53 53 H 1.48498 * 110.00093 * 301.32051 * 25 23 22 54 54 H 1.08003 * 119.94221 * 179.97438 * 26 22 5 55 55 H 1.08008 * 119.97063 * 180.02562 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4302 1.2840 -0.0059 5 6 4.0567 2.5208 -0.0015 6 8 5.4137 2.5958 -0.0029 7 6 6.1316 1.3603 -0.0028 8 6 7.6125 1.6398 -0.0051 9 8 8.0135 2.7844 -0.0070 10 7 8.4911 0.6179 -0.0060 11 6 9.9307 0.8896 -0.0087 12 6 10.6734 -0.3008 -0.6188 13 6 12.1767 -0.0167 -0.6222 14 6 12.6575 0.2028 0.8136 15 6 11.9150 1.3933 1.4237 16 6 10.4115 1.1092 1.4271 17 6 10.1315 -0.1458 2.2562 18 6 10.8742 -1.3363 1.6462 19 8 10.6122 -2.5085 2.4202 20 6 12.3775 -1.0522 1.6427 21 6 10.3933 -1.5558 0.2104 22 6 3.2972 3.6820 -0.0014 23 6 3.9776 5.0267 -0.0029 24 8 4.5025 5.2935 -1.3050 25 14 2.7446 6.3471 0.4521 26 6 1.9173 3.6064 -0.0005 27 6 1.2907 2.3752 -0.0002 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3633 0.5139 0.8900 31 1 4.0196 0.3791 -0.0101 32 1 5.8690 0.7874 -0.8922 33 1 5.8708 0.7885 0.8877 34 1 8.1704 -0.2975 -0.0048 35 1 10.1305 1.7838 -0.5992 36 1 10.3311 -0.4570 -1.6418 37 1 12.3762 0.8773 -1.2129 38 1 12.7057 -0.8651 -1.0565 39 1 13.7287 0.4047 0.8112 40 1 12.2577 1.5499 2.4464 41 1 12.1144 2.2874 0.8330 42 1 9.8825 1.9575 1.8613 43 1 9.0605 -0.3479 2.2590 44 1 10.4740 0.0106 3.2791 45 1 10.8915 -2.4408 3.3435 46 1 12.9066 -1.9002 1.2077 47 1 12.7200 -0.8959 2.6656 48 1 9.3223 -1.7582 0.2128 49 1 10.9227 -2.4037 -0.2244 50 1 4.7907 5.0233 0.7229 51 1 3.8332 5.3115 -2.0027 52 1 3.4033 7.6779 0.4548 53 1 1.6149 6.3409 -0.5117 54 1 1.3278 4.5114 0.0000 55 1 0.2121 2.3187 0.0001 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_4974312.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:02 Heat of formation + Delta-G solvation = -164.991253 kcal Electronic energy + Delta-G solvation = -38226.169722 eV Core-core repulsion = 33387.711020 eV Total energy + Delta-G solvation = -4838.458702 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.197 amu Computer time = 1.90 seconds Orbital eigenvalues (eV) -42.89660 -41.80781 -40.67467 -39.78141 -38.39758 -37.48428 -37.01970 -35.81786 -33.78423 -32.70813 -32.30514 -31.77656 -31.25380 -29.41474 -28.36682 -27.00615 -26.48082 -26.14427 -23.85327 -22.94321 -22.56495 -22.47408 -22.34037 -21.24603 -19.97926 -19.17641 -18.47786 -18.19857 -17.87054 -17.77589 -17.56300 -17.22331 -16.75488 -16.67758 -16.50622 -16.08385 -15.90964 -15.82424 -15.71126 -15.41300 -15.19827 -15.18971 -14.89679 -14.78666 -14.58798 -14.51604 -14.27712 -13.78430 -13.71940 -13.55904 -13.49643 -13.36655 -13.35323 -13.17138 -13.02865 -12.51660 -12.31331 -12.19371 -12.08320 -12.03424 -11.95456 -11.92481 -11.67586 -11.63662 -11.60956 -11.26940 -11.03353 -10.81665 -10.52484 -10.46425 -10.11893 -9.72255 -9.12134 -4.93467 0.18317 0.28985 1.30937 1.39189 1.40711 1.55224 1.95618 2.23404 2.53175 2.55710 3.09940 3.36808 3.42574 3.48436 3.51825 3.70435 3.78217 3.78721 3.85817 3.90511 3.94836 3.98167 4.05076 4.07989 4.12895 4.15054 4.15124 4.20231 4.24201 4.28810 4.33201 4.39030 4.41686 4.44842 4.55031 4.63658 4.64839 4.65678 4.68138 4.78097 4.90845 4.95598 4.97518 5.00213 5.00842 5.03259 5.08752 5.13992 5.21819 5.25229 5.26377 5.29662 5.38223 5.43295 5.44854 5.46888 6.10469 6.33331 6.39484 6.56464 6.83872 7.05852 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.165 3.835 4 C -0.253 4.253 5 C 0.176 3.824 6 O -0.301 6.301 7 C 0.034 3.966 8 C 0.516 3.484 9 O -0.564 6.564 10 N -0.705 5.705 11 C 0.158 3.842 12 C -0.082 4.082 13 C -0.110 4.110 14 C -0.083 4.083 15 C -0.109 4.109 16 C -0.090 4.090 17 C -0.130 4.130 18 C 0.137 3.863 19 O -0.575 6.575 20 C -0.134 4.134 21 C -0.100 4.100 22 C -0.195 4.195 23 C -0.078 4.078 24 O -0.549 6.549 25 Si 0.782 3.218 26 C -0.041 4.041 27 C -0.237 4.237 28 H 0.067 0.933 29 H 0.116 0.884 30 H 0.071 0.929 31 H 0.151 0.849 32 H 0.118 0.882 33 H 0.121 0.879 34 H 0.415 0.585 35 H 0.071 0.929 36 H 0.093 0.907 37 H 0.069 0.931 38 H 0.081 0.919 39 H 0.084 0.916 40 H 0.071 0.929 41 H 0.062 0.938 42 H 0.054 0.946 43 H 0.066 0.934 44 H 0.070 0.930 45 H 0.389 0.611 46 H 0.071 0.929 47 H 0.071 0.929 48 H 0.073 0.927 49 H 0.077 0.923 50 H 0.097 0.903 51 H 0.381 0.619 52 H -0.308 1.308 53 H -0.261 1.261 54 H 0.157 0.843 55 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.570 -6.012 2.043 7.285 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.272 4.272 5 C 0.130 3.870 6 O -0.214 6.214 7 C -0.044 4.044 8 C 0.301 3.699 9 O -0.441 6.441 10 N -0.359 5.359 11 C 0.054 3.946 12 C -0.101 4.101 13 C -0.148 4.148 14 C -0.102 4.102 15 C -0.147 4.147 16 C -0.110 4.110 17 C -0.168 4.168 18 C 0.097 3.903 19 O -0.383 6.383 20 C -0.172 4.172 21 C -0.138 4.138 22 C -0.196 4.196 23 C -0.186 4.186 24 O -0.357 6.357 25 Si 0.685 3.315 26 C -0.058 4.058 27 C -0.255 4.255 28 H 0.085 0.915 29 H 0.134 0.866 30 H 0.089 0.911 31 H 0.169 0.831 32 H 0.136 0.864 33 H 0.139 0.861 34 H 0.253 0.747 35 H 0.089 0.911 36 H 0.112 0.888 37 H 0.088 0.912 38 H 0.100 0.900 39 H 0.102 0.898 40 H 0.089 0.911 41 H 0.081 0.919 42 H 0.073 0.927 43 H 0.085 0.915 44 H 0.089 0.911 45 H 0.239 0.761 46 H 0.090 0.910 47 H 0.090 0.910 48 H 0.092 0.908 49 H 0.095 0.905 50 H 0.115 0.885 51 H 0.230 0.770 52 H -0.236 1.236 53 H -0.187 1.187 54 H 0.174 0.826 55 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -3.170 -4.719 1.550 5.892 hybrid contribution 0.253 -0.287 -0.596 0.708 sum -2.917 -5.006 0.954 5.872 Atomic orbital electron populations 1.23404 0.75976 1.05705 1.02714 1.86055 1.23783 1.26583 1.87916 1.18868 0.91613 0.85013 0.92662 1.20547 0.93463 0.97392 1.15793 1.18594 0.81705 0.93187 0.93502 1.86224 1.15541 1.31472 1.88119 1.22723 0.88658 0.86549 1.06424 1.20414 0.88384 0.85221 0.75837 1.90773 1.80649 1.23001 1.49716 1.45836 1.06008 1.09355 1.74750 1.20941 0.78642 0.98748 0.96282 1.21293 0.96244 0.92784 0.99790 1.21588 0.93791 1.02849 0.96564 1.21059 1.00304 0.94109 0.94705 1.21555 0.93251 0.98171 1.01710 1.21323 0.96933 0.97564 0.95206 1.22128 1.00993 0.94330 0.99369 1.21060 0.93704 0.83995 0.91574 1.86510 1.86004 1.38846 1.26938 1.22176 0.95785 0.98185 1.01075 1.21456 1.01933 0.97678 0.92727 1.19612 0.93527 0.93929 1.12579 1.25170 1.06301 0.99778 0.87314 1.86652 1.38552 1.93081 1.17433 0.94099 0.75475 0.73309 0.88608 1.20953 0.91977 0.98833 0.94059 1.21400 1.01631 0.91193 1.11311 0.91454 0.86573 0.91068 0.83109 0.86437 0.86133 0.74710 0.91103 0.88832 0.91191 0.90005 0.89756 0.91060 0.91926 0.92741 0.91499 0.91149 0.76124 0.91019 0.91048 0.90847 0.90465 0.88543 0.77022 1.23624 1.18717 0.82627 0.82440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.41 10.49 -92.39 -0.97 -1.38 16 3 C 0.16 0.36 6.68 22.49 0.15 0.51 16 4 C -0.25 -0.76 8.97 22.46 0.20 -0.56 16 5 C 0.18 1.11 6.66 22.49 0.15 1.26 16 6 O -0.30 -2.81 8.99 -73.42 -0.66 -3.47 16 7 C 0.03 0.04 5.22 71.24 0.37 0.41 16 8 C 0.52 3.10 7.87 87.66 0.69 3.79 16 9 O -0.56 -9.59 16.16 15.99 0.26 -9.33 16 10 N -0.71 0.40 4.24 -442.53 -1.87 -1.47 16 11 C 0.16 0.14 2.05 44.99 0.09 0.24 16 12 C -0.08 0.26 2.88 -10.79 -0.03 0.23 16 13 C -0.11 0.38 5.19 30.59 0.16 0.54 16 14 C -0.08 0.25 3.19 -10.79 -0.03 0.21 16 15 C -0.11 0.06 5.19 30.59 0.16 0.21 16 16 C -0.09 -0.12 2.88 -10.79 -0.03 -0.15 16 17 C -0.13 0.18 4.66 30.60 0.14 0.32 16 18 C 0.14 -0.31 1.15 -10.79 -0.01 -0.32 16 19 O -0.57 0.37 12.98 -148.98 -1.93 -1.56 16 20 C -0.13 0.43 4.82 30.59 0.15 0.58 16 21 C -0.10 0.31 4.67 30.60 0.14 0.46 16 22 C -0.20 -0.95 5.27 -19.75 -0.10 -1.06 16 23 C -0.08 -0.51 2.37 71.24 0.17 -0.34 16 24 O -0.55 -5.77 12.88 -148.98 -1.92 -7.69 16 25 Si 0.78 0.76 30.24 68.60 2.07 2.84 16 26 C -0.04 -0.01 8.65 22.24 0.19 0.18 16 27 C -0.24 0.15 9.04 22.38 0.20 0.36 16 28 H 0.07 -0.52 7.66 -2.39 -0.02 -0.54 16 29 H 0.12 -1.04 8.14 -2.39 -0.02 -1.06 16 30 H 0.07 -0.59 7.66 -2.39 -0.02 -0.60 16 31 H 0.15 -0.16 6.30 -2.91 -0.02 -0.18 16 32 H 0.12 -0.45 7.65 -2.39 -0.02 -0.47 16 33 H 0.12 -0.54 7.67 -2.39 -0.02 -0.55 16 34 H 0.41 -2.59 6.87 -92.71 -0.64 -3.23 16 35 H 0.07 0.43 7.58 -2.38 -0.02 0.41 16 36 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 37 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 38 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 39 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 40 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 41 H 0.06 0.06 8.14 -2.38 -0.02 0.04 16 42 H 0.05 0.36 8.14 -2.39 -0.02 0.34 16 43 H 0.07 -0.05 7.61 -2.39 -0.02 -0.07 16 44 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 45 H 0.39 -2.63 9.05 -74.06 -0.67 -3.30 16 46 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 47 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 48 H 0.07 -0.33 6.51 -2.39 -0.02 -0.34 16 49 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 50 H 0.10 0.95 7.82 -2.39 -0.02 0.93 16 51 H 0.38 1.12 8.70 -74.06 -0.64 0.47 16 52 H -0.31 -2.88 7.11 99.48 0.71 -2.17 16 53 H -0.26 -0.28 6.68 99.48 0.66 0.39 16 54 H 0.16 -0.64 4.85 -2.91 -0.01 -0.66 16 55 H 0.16 -0.94 6.29 -2.91 -0.02 -0.96 16 Total: 0.00 -25.93 416.92 -2.16 -28.09 By element: Atomic # 1 Polarization: -12.91 SS G_CDS: -1.01 Total: -13.92 kcal Atomic # 6 Polarization: 4.03 SS G_CDS: 3.87 Total: 7.90 kcal Atomic # 7 Polarization: 0.40 SS G_CDS: -1.87 Total: -1.47 kcal Atomic # 8 Polarization: -18.21 SS G_CDS: -5.22 Total: -23.43 kcal Atomic # 14 Polarization: 0.76 SS G_CDS: 2.07 Total: 2.84 kcal Total: -25.93 -2.16 -28.09 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_4974312.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.897 kcal (2) G-P(sol) polarization free energy of solvation -25.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -162.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.161 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.094 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.991 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.90 seconds