Wall clock time and date at job start Thu Mar 4 2021 18:05:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35990 * 117.00017 * 2 1 4 4 C 1.39165 * 120.07182 * 179.97438 * 3 2 1 5 5 O 1.35992 * 120.07045 * 359.97438 * 4 3 2 6 6 C 1.42902 * 116.99570 * 180.02562 * 5 4 3 7 7 C 1.50703 * 109.46962 * 180.02562 * 6 5 4 8 8 O 1.21284 * 119.99942 * 359.97438 * 7 6 5 9 9 N 1.34773 * 119.99837 * 180.02562 * 7 6 5 10 10 C 1.46499 * 120.00031 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47695 * 204.99801 * 10 9 7 12 12 C 1.52997 * 109.47457 * 179.97438 * 11 10 9 13 13 C 1.53002 * 109.46817 * 60.00169 * 12 11 10 14 14 C 1.52996 * 109.47346 * 299.99737 * 13 12 11 15 15 C 1.53002 * 109.46891 * 59.99997 * 14 13 12 16 16 C 1.52997 * 109.46978 * 60.00410 * 15 14 13 17 17 C 1.53006 * 109.47164 * 299.99874 * 16 15 14 18 18 O 1.42895 * 109.47000 * 180.02562 * 17 16 15 19 19 C 1.52997 * 109.47127 * 59.99836 * 17 16 15 20 20 C 1.52999 * 109.46623 * 299.99900 * 17 16 15 21 21 C 1.38565 * 119.85181 * 180.25610 * 4 3 2 22 22 C 1.38244 * 119.99988 * 359.46211 * 21 4 3 23 23 C 1.38255 * 120.14583 * 0.51577 * 22 21 4 24 24 C 1.50697 * 119.92883 * 179.74306 * 23 22 21 25 25 O 1.42901 * 109.47396 * 245.02470 * 24 23 22 26 26 Si 1.86304 * 109.46716 * 5.02088 * 24 23 22 27 27 C 1.38245 * 120.14817 * 359.76573 * 23 22 21 28 28 H 1.09003 * 109.46809 * 59.99989 * 1 2 3 29 29 H 1.09001 * 109.47151 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47062 * 300.00326 * 1 2 3 31 31 H 1.09002 * 109.47135 * 60.00189 * 6 5 4 32 32 H 1.08995 * 109.47240 * 300.00196 * 6 5 4 33 33 H 0.96998 * 120.00452 * 359.97438 * 9 7 6 34 34 H 1.09004 * 109.47041 * 324.99924 * 10 9 7 35 35 H 1.09001 * 109.46989 * 59.99548 * 11 10 9 36 36 H 1.08993 * 109.47194 * 299.99651 * 12 11 10 37 37 H 1.09002 * 109.46695 * 179.97438 * 12 11 10 38 38 H 1.09004 * 109.46733 * 179.97438 * 13 12 11 39 39 H 1.08992 * 109.47554 * 180.02562 * 14 13 12 40 40 H 1.09004 * 109.47108 * 300.00289 * 14 13 12 41 41 H 1.09002 * 109.47097 * 180.02562 * 15 14 13 42 42 H 1.09000 * 109.47140 * 179.97438 * 16 15 14 43 43 H 1.09001 * 109.47375 * 59.99908 * 16 15 14 44 44 H 0.96696 * 114.00485 * 299.99339 * 18 17 16 45 45 H 1.09002 * 109.47153 * 180.02562 * 19 17 16 46 46 H 1.09001 * 109.46832 * 60.00321 * 19 17 16 47 47 H 1.09000 * 109.47486 * 299.99829 * 20 17 16 48 48 H 1.09002 * 109.46716 * 179.97438 * 20 17 16 49 49 H 1.07994 * 119.99612 * 179.72694 * 21 4 3 50 50 H 1.07996 * 119.92739 * 180.25446 * 22 21 4 51 51 H 1.08997 * 109.47628 * 125.01757 * 24 23 22 52 52 H 0.96701 * 114.00148 * 59.99265 * 25 24 23 53 53 H 1.48508 * 109.99921 * 179.97438 * 26 24 23 54 54 H 1.48494 * 110.00298 * 301.31418 * 26 24 23 55 55 H 1.07997 * 120.00071 * 179.97438 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2862 0.0005 5 8 4.1795 0.1476 0.0016 6 6 5.6003 0.3006 0.0027 7 6 6.2518 -1.0583 0.0031 8 8 5.5669 -2.0593 0.0030 9 7 7.5956 -1.1613 0.0046 10 6 8.2290 -2.4823 0.0056 11 6 9.6277 -2.3769 0.6167 12 6 10.2889 -3.7566 0.6183 13 6 10.3976 -4.2717 -0.8183 14 6 8.9989 -4.3772 -1.4295 15 6 8.3377 -2.9974 -1.4310 16 6 9.1837 -2.0274 -2.2580 17 6 10.5825 -1.9219 -1.6469 18 8 11.3724 -1.0154 -2.4190 19 6 11.2437 -3.3016 -1.6453 20 6 10.4738 -1.4068 -0.2104 21 6 4.0603 2.5233 0.0059 22 6 3.3030 3.6798 -0.0005 23 6 1.9224 3.6057 -0.0016 24 6 1.1017 4.8695 -0.0027 25 8 0.3642 4.9598 1.2180 26 14 2.2311 6.3432 -0.1562 27 6 1.2932 2.3748 -0.0010 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5139 0.8899 31 1 5.9058 0.8507 0.8927 32 1 5.9072 0.8500 -0.8872 33 1 8.1435 -0.3609 0.0051 34 1 7.6264 -3.1738 0.5946 35 1 9.5503 -2.0103 1.6403 36 1 9.6862 -4.4477 1.2075 37 1 11.2856 -3.6813 1.0533 38 1 10.8691 -5.2545 -0.8172 39 1 9.0762 -4.7445 -2.4527 40 1 8.3961 -5.0683 -0.8403 41 1 7.3410 -3.0727 -1.8660 42 1 8.7124 -1.0445 -2.2595 43 1 9.2611 -2.3943 -3.2815 44 1 11.4839 -1.2791 -3.3427 45 1 12.2400 -3.2266 -1.2096 46 1 11.3211 -3.6686 -2.6688 47 1 10.0027 -0.4238 -0.2115 48 1 11.4702 -1.3320 0.2251 49 1 5.1386 2.5838 0.0108 50 1 3.7908 4.6433 -0.0005 51 1 0.4098 4.8528 -0.8448 52 1 0.9171 4.9793 2.0110 53 1 1.4338 7.5961 -0.1592 54 1 3.2000 6.3600 0.9690 55 1 0.2146 2.3197 -0.0014 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_60476.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:11 Heat of formation + Delta-G solvation = -164.724000 kcal Electronic energy + Delta-G solvation = -37817.464607 eV Core-core repulsion = 32979.017494 eV Total energy + Delta-G solvation = -4838.447113 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.197 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -42.86881 -41.79105 -40.60785 -39.29669 -38.93167 -37.46581 -37.02743 -35.78879 -33.75845 -32.69988 -32.03788 -31.63537 -31.40029 -29.47648 -28.46214 -26.98224 -26.57946 -26.07008 -23.70770 -22.94955 -22.69880 -22.36613 -22.29857 -21.22402 -19.80855 -19.13928 -18.52120 -18.33219 -18.07003 -17.71305 -17.53732 -17.19791 -16.81463 -16.68773 -16.14140 -15.89361 -15.88409 -15.82786 -15.78399 -15.54837 -15.34527 -15.17510 -14.84996 -14.75012 -14.57713 -14.34440 -14.25340 -13.81974 -13.68430 -13.56827 -13.53000 -13.45697 -13.33990 -13.02684 -12.63718 -12.59260 -12.23240 -12.14912 -12.14090 -12.04297 -12.00836 -11.92834 -11.90120 -11.63981 -11.57919 -11.24733 -10.98938 -10.79007 -10.61628 -10.44018 -10.08623 -9.80117 -8.93482 -4.88587 0.15452 0.26622 1.32906 1.44170 1.46777 1.62884 1.98924 2.29815 2.54093 2.54990 3.12544 3.39488 3.40514 3.45190 3.54199 3.65149 3.80306 3.84427 3.87262 3.89576 3.97377 4.02666 4.05780 4.11675 4.13217 4.15258 4.17566 4.22716 4.26198 4.27506 4.29907 4.31349 4.34900 4.56532 4.57290 4.62903 4.65211 4.66470 4.68096 4.70575 4.93616 4.98236 4.99647 4.99753 5.02606 5.05369 5.10966 5.11416 5.16272 5.28205 5.32295 5.35832 5.40477 5.46586 5.47289 5.58241 5.95158 6.38371 6.48882 6.52275 6.85984 7.11370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.334 6.334 3 C 0.077 3.923 4 C 0.085 3.915 5 O -0.313 6.313 6 C 0.034 3.966 7 C 0.514 3.486 8 O -0.569 6.569 9 N -0.704 5.704 10 C 0.158 3.842 11 C -0.082 4.082 12 C -0.110 4.110 13 C -0.083 4.083 14 C -0.109 4.109 15 C -0.091 4.091 16 C -0.130 4.130 17 C 0.137 3.863 18 O -0.575 6.575 19 C -0.135 4.135 20 C -0.100 4.100 21 C -0.161 4.161 22 C -0.111 4.111 23 C -0.115 4.115 24 C -0.085 4.085 25 O -0.550 6.550 26 Si 0.776 3.224 27 C -0.151 4.151 28 H 0.066 0.934 29 H 0.111 0.889 30 H 0.062 0.938 31 H 0.125 0.875 32 H 0.126 0.874 33 H 0.416 0.584 34 H 0.070 0.930 35 H 0.095 0.905 36 H 0.069 0.931 37 H 0.081 0.919 38 H 0.083 0.917 39 H 0.069 0.931 40 H 0.061 0.939 41 H 0.053 0.947 42 H 0.069 0.931 43 H 0.068 0.932 44 H 0.389 0.611 45 H 0.071 0.929 46 H 0.070 0.930 47 H 0.076 0.924 48 H 0.076 0.924 49 H 0.174 0.826 50 H 0.157 0.843 51 H 0.122 0.878 52 H 0.386 0.614 53 H -0.307 1.307 54 H -0.274 1.274 55 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.331 3.188 -1.789 7.310 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.031 3.969 4 C 0.040 3.960 5 O -0.226 6.226 6 C -0.044 4.044 7 C 0.300 3.700 8 O -0.447 6.447 9 N -0.359 5.359 10 C 0.053 3.947 11 C -0.101 4.101 12 C -0.148 4.148 13 C -0.102 4.102 14 C -0.147 4.147 15 C -0.111 4.111 16 C -0.168 4.168 17 C 0.097 3.903 18 O -0.383 6.383 19 C -0.173 4.173 20 C -0.137 4.137 21 C -0.179 4.179 22 C -0.129 4.129 23 C -0.116 4.116 24 C -0.193 4.193 25 O -0.358 6.358 26 Si 0.680 3.320 27 C -0.170 4.170 28 H 0.085 0.915 29 H 0.129 0.871 30 H 0.081 0.919 31 H 0.143 0.857 32 H 0.144 0.856 33 H 0.255 0.745 34 H 0.088 0.912 35 H 0.113 0.887 36 H 0.088 0.912 37 H 0.100 0.900 38 H 0.101 0.899 39 H 0.088 0.912 40 H 0.080 0.920 41 H 0.072 0.928 42 H 0.087 0.913 43 H 0.087 0.913 44 H 0.239 0.761 45 H 0.090 0.910 46 H 0.088 0.912 47 H 0.094 0.906 48 H 0.095 0.905 49 H 0.191 0.809 50 H 0.174 0.826 51 H 0.140 0.860 52 H 0.235 0.765 53 H -0.235 1.235 54 H -0.200 1.200 55 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 5.660 3.110 -1.261 6.580 hybrid contribution -0.743 -0.495 0.515 1.031 sum 4.917 2.615 -0.746 5.619 Atomic orbital electron populations 1.23285 0.76808 1.05197 1.02116 1.86189 1.22999 1.26609 1.89080 1.18669 0.89870 0.85650 1.02678 1.18596 0.88225 0.86507 1.02685 1.86224 1.18097 1.29047 1.89273 1.22769 0.79453 0.95309 1.06856 1.20524 0.82971 0.90809 0.75709 1.90769 1.63998 1.40030 1.49887 1.45817 1.05068 1.10230 1.74739 1.20926 0.93654 0.83925 0.96146 1.21290 0.92009 0.96881 0.99876 1.21588 1.01609 0.95168 0.96457 1.21056 0.95001 0.99344 0.94794 1.21554 0.96024 0.95523 1.01619 1.21326 0.98551 0.95862 0.95351 1.22125 0.95657 0.99722 0.99275 1.21059 0.88926 0.88630 0.91696 1.86508 1.73554 1.51239 1.26952 1.22181 0.99307 0.94791 1.01006 1.21455 1.01055 0.98648 0.92576 1.21362 1.02181 0.89403 1.04936 1.21038 0.92491 0.99040 1.00294 1.20113 0.94372 0.94739 1.02344 1.25302 1.02197 1.02183 0.89588 1.86571 1.37368 1.95584 1.16315 0.93958 0.77302 0.72428 0.88268 1.21024 1.00521 0.90501 1.04915 0.91538 0.87119 0.91942 0.85715 0.85633 0.74536 0.91168 0.88680 0.91243 0.90032 0.89907 0.91201 0.91988 0.92848 0.91253 0.91310 0.76148 0.91047 0.91174 0.90554 0.90498 0.80919 0.82565 0.86006 0.76452 1.23528 1.19994 0.84029 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.17 16 2 O -0.33 -3.81 10.28 -79.57 -0.82 -4.62 16 3 C 0.08 0.64 6.70 22.57 0.15 0.79 16 4 C 0.09 0.51 6.70 22.57 0.15 0.66 16 5 O -0.31 -2.85 9.45 -67.05 -0.63 -3.49 16 6 C 0.03 -0.05 5.22 71.24 0.37 0.33 16 7 C 0.51 2.25 7.87 87.66 0.69 2.94 16 8 O -0.57 -9.23 16.16 15.99 0.26 -8.97 16 9 N -0.70 1.73 4.24 -442.53 -1.87 -0.15 16 10 C 0.16 -0.06 2.05 44.99 0.09 0.04 16 11 C -0.08 0.37 2.88 -10.79 -0.03 0.34 16 12 C -0.11 0.48 5.19 30.59 0.16 0.64 16 13 C -0.08 0.30 3.19 -10.79 -0.03 0.27 16 14 C -0.11 0.12 5.19 30.59 0.16 0.28 16 15 C -0.09 -0.04 2.88 -10.79 -0.03 -0.07 16 16 C -0.13 0.32 4.66 30.60 0.14 0.46 16 17 C 0.14 -0.47 1.15 -10.79 -0.01 -0.48 16 18 O -0.57 1.04 12.98 -148.98 -1.93 -0.89 16 19 C -0.14 0.53 4.82 30.59 0.15 0.68 16 20 C -0.10 0.46 4.67 30.60 0.14 0.60 16 21 C -0.16 0.31 9.04 22.35 0.20 0.51 16 22 C -0.11 0.30 8.66 22.28 0.19 0.50 16 23 C -0.11 -0.03 5.35 -19.86 -0.11 -0.14 16 24 C -0.08 0.10 2.80 71.24 0.20 0.30 16 25 O -0.55 -1.23 12.83 -148.98 -1.91 -3.14 16 26 Si 0.78 -2.93 29.88 68.60 2.05 -0.88 16 27 C -0.15 -0.59 8.67 22.35 0.19 -0.40 16 28 H 0.07 0.00 7.66 -2.39 -0.02 -0.02 16 29 H 0.11 0.01 8.14 -2.39 -0.02 -0.01 16 30 H 0.06 0.05 7.66 -2.39 -0.02 0.03 16 31 H 0.13 -1.02 7.65 -2.39 -0.02 -1.04 16 32 H 0.13 -1.03 7.67 -2.39 -0.02 -1.05 16 33 H 0.42 -3.65 6.87 -92.71 -0.64 -4.28 16 34 H 0.07 0.35 7.58 -2.38 -0.02 0.33 16 35 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 36 H 0.07 -0.26 8.14 -2.39 -0.02 -0.27 16 37 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 38 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 39 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 40 H 0.06 0.03 8.14 -2.38 -0.02 0.01 16 41 H 0.05 0.32 8.14 -2.39 -0.02 0.30 16 42 H 0.07 -0.16 7.61 -2.39 -0.02 -0.18 16 43 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 44 H 0.39 -3.01 9.05 -74.06 -0.67 -3.68 16 45 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 46 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 47 H 0.08 -0.49 6.51 -2.39 -0.02 -0.51 16 48 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 49 H 0.17 -1.69 6.30 -2.91 -0.02 -1.70 16 50 H 0.16 -1.25 4.83 -2.91 -0.01 -1.26 16 51 H 0.12 -0.29 7.96 -2.39 -0.02 -0.31 16 52 H 0.39 -1.30 8.70 -74.06 -0.64 -1.95 16 53 H -0.31 -1.41 7.11 99.48 0.71 -0.70 16 54 H -0.27 0.36 7.00 99.48 0.70 1.06 16 55 H 0.14 0.33 6.30 -2.91 -0.02 0.31 16 Total: 0.00 -28.38 417.48 -1.95 -30.32 By element: Atomic # 1 Polarization: -16.62 SS G_CDS: -0.97 Total: -17.60 kcal Atomic # 6 Polarization: 5.52 SS G_CDS: 3.89 Total: 9.41 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -1.87 Total: -0.15 kcal Atomic # 8 Polarization: -16.08 SS G_CDS: -5.04 Total: -21.12 kcal Atomic # 14 Polarization: -2.93 SS G_CDS: 2.05 Total: -0.88 kcal Total: -28.38 -1.95 -30.32 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_60476.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.402 kcal (2) G-P(sol) polarization free energy of solvation -28.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -162.778 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.946 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.322 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.724 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds