Wall clock time and date at job start Thu Mar 4 2021 18:05:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86294 * 109.47181 * 2 1 4 4 C 1.50696 * 109.46887 * 120.00216 * 2 1 3 5 5 C 1.35460 * 125.56255 * 245.02257 * 4 2 1 6 6 C 1.39835 * 107.86481 * 179.72317 * 5 4 2 7 7 C 1.37877 * 107.08483 * 0.41462 * 6 5 4 8 8 C 1.46677 * 126.23377 * 179.84922 * 7 6 5 9 9 O 1.21690 * 120.00064 * 359.68756 * 8 7 6 10 10 N 1.34780 * 120.00091 * 179.69447 * 8 7 6 11 11 C 1.46500 * 119.99944 * 180.02562 * 10 8 7 12 12 C 1.52997 * 109.46927 * 155.00048 * 11 10 8 13 13 C 1.52997 * 109.47457 * 59.99484 * 12 11 10 14 14 C 1.53002 * 109.46817 * 60.00169 * 13 12 11 15 15 C 1.52996 * 109.47346 * 299.99737 * 14 13 12 16 16 C 1.53002 * 109.46891 * 59.99997 * 15 14 13 17 17 C 1.52997 * 109.46978 * 60.00410 * 16 15 14 18 18 C 1.53006 * 109.47164 * 299.99874 * 17 16 15 19 19 O 1.42895 * 109.47000 * 180.02562 * 18 17 16 20 20 C 1.52997 * 109.47127 * 59.99836 * 18 17 16 21 21 C 1.52999 * 109.46623 * 299.99900 * 18 17 16 22 22 N 1.35534 * 125.56960 * 65.00192 * 4 2 1 23 23 H 0.96698 * 113.99828 * 59.99826 * 1 2 3 24 24 H 1.08996 * 109.47036 * 240.00234 * 2 1 3 25 25 H 1.48504 * 110.00152 * 298.68324 * 3 2 1 26 26 H 1.48498 * 110.00055 * 59.99989 * 3 2 1 27 27 H 1.07998 * 126.06739 * 359.97438 * 5 4 2 28 28 H 1.07998 * 126.46358 * 180.26247 * 6 5 4 29 29 H 0.97001 * 119.99485 * 359.97438 * 10 8 7 30 30 H 1.09000 * 109.47381 * 34.99693 * 11 10 8 31 31 H 1.09001 * 109.46989 * 299.99155 * 12 11 10 32 32 H 1.08993 * 109.47194 * 299.99651 * 13 12 11 33 33 H 1.09002 * 109.46695 * 179.97438 * 13 12 11 34 34 H 1.09004 * 109.46733 * 179.97438 * 14 13 12 35 35 H 1.08992 * 109.47554 * 180.02562 * 15 14 13 36 36 H 1.09004 * 109.47108 * 300.00289 * 15 14 13 37 37 H 1.09002 * 109.47097 * 180.02562 * 16 15 14 38 38 H 1.09000 * 109.47140 * 179.97438 * 17 16 15 39 39 H 1.09001 * 109.47375 * 59.99908 * 17 16 15 40 40 H 0.96696 * 114.00485 * 299.99339 * 19 18 17 41 41 H 1.09002 * 109.47153 * 180.02562 * 20 18 17 42 42 H 1.09001 * 109.46832 * 60.00321 * 20 18 17 43 43 H 1.09000 * 109.47486 * 299.99829 * 21 18 17 44 44 H 1.09002 * 109.46716 * 179.97438 * 21 18 17 45 45 H 0.97006 * 125.67215 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6326 -0.1393 2.2388 6 6 2.9018 -1.1295 3.1887 7 6 2.3529 -2.3031 2.7171 8 6 2.3936 -3.6088 3.3843 9 8 2.9569 -3.7269 4.4564 10 7 1.8071 -4.6777 2.8097 11 6 1.8473 -5.9816 3.4764 12 6 0.6626 -6.8297 3.0093 13 6 0.7435 -7.0286 1.4945 14 6 2.0509 -7.7412 1.1428 15 6 3.2356 -6.8931 1.6097 16 6 3.1547 -6.6941 3.1246 17 6 3.1967 -8.0559 3.8207 18 6 2.0120 -8.9042 3.3537 19 8 2.0509 -10.1758 4.0044 20 6 2.0928 -9.1030 1.8389 21 6 0.7046 -8.1916 3.7056 22 7 1.7548 -2.0251 1.5090 23 1 -0.3933 0.4417 -0.7650 24 1 1.7923 -0.5138 -0.8900 25 1 1.5879 2.4586 -1.2242 26 1 1.5615 2.4678 1.2085 27 1 2.9275 0.8978 2.3004 28 1 3.4405 -1.0002 4.1157 29 1 1.3579 -4.5834 1.9552 30 1 1.7896 -5.8399 4.5556 31 1 -0.2688 -6.3221 3.2600 32 1 0.7135 -6.0585 0.9986 33 1 -0.1003 -7.6333 1.1620 34 1 2.1083 -7.8833 0.0636 35 1 4.1670 -7.4005 1.3588 36 1 3.2058 -5.9229 1.1137 37 1 3.9985 -6.0895 3.4572 38 1 3.1395 -7.9142 4.8999 39 1 4.1282 -8.5636 3.5701 40 1 2.8537 -10.6845 3.8262 41 1 1.2486 -9.7070 1.5062 42 1 3.0243 -9.6107 1.5884 43 1 0.6470 -8.0498 4.7848 44 1 -0.1394 -8.7956 3.3725 45 1 1.2846 -2.6635 0.9502 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_6580494.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:27 Heat of formation + Delta-G solvation = -82.865752 kcal Electronic energy + Delta-G solvation = -28304.400641 eV Core-core repulsion = 24480.743019 eV Total energy + Delta-G solvation = -3823.657622 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.162 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.98483 -42.36788 -40.10334 -37.83039 -37.62691 -35.49956 -33.81021 -33.30102 -32.25670 -31.70263 -30.83188 -27.47765 -27.03767 -26.09624 -23.50130 -22.83479 -22.59167 -22.07595 -21.45522 -21.07708 -19.81338 -18.68416 -18.63108 -18.03213 -17.07392 -16.82936 -16.49521 -16.01560 -15.91335 -15.56086 -15.37920 -15.30995 -15.22729 -14.95413 -14.62691 -14.39043 -14.30188 -14.09628 -13.90608 -13.62479 -13.58287 -13.53321 -13.41610 -13.09326 -12.71678 -12.59262 -12.10121 -12.01328 -12.01086 -11.87519 -11.42914 -11.37264 -11.25149 -10.91506 -10.63238 -10.44845 -10.19492 -10.08847 -9.28581 -4.83337 0.27465 1.21479 1.51691 1.65664 1.89579 1.99911 2.16883 2.25579 3.10223 3.27448 3.35938 3.39359 3.72231 3.76901 3.80694 3.84058 3.92315 4.01710 4.08796 4.13308 4.17432 4.19682 4.21302 4.26599 4.33511 4.44618 4.51667 4.55395 4.65371 4.73197 4.81125 4.93286 4.95326 4.96082 4.97908 4.99433 5.07521 5.09730 5.11272 5.22442 5.27099 5.32353 5.41624 5.45493 5.59265 5.76638 6.25591 6.42767 6.54105 6.82671 7.01411 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.065 4.065 3 Si 0.786 3.214 4 C 0.070 3.930 5 C -0.208 4.208 6 C -0.117 4.117 7 C -0.063 4.063 8 C 0.590 3.410 9 O -0.569 6.569 10 N -0.707 5.707 11 C 0.159 3.841 12 C -0.083 4.083 13 C -0.111 4.111 14 C -0.081 4.081 15 C -0.105 4.105 16 C -0.089 4.089 17 C -0.134 4.134 18 C 0.135 3.865 19 O -0.579 6.579 20 C -0.134 4.134 21 C -0.099 4.099 22 N -0.512 5.512 23 H 0.401 0.599 24 H 0.108 0.892 25 H -0.280 1.280 26 H -0.300 1.300 27 H 0.164 0.836 28 H 0.147 0.853 29 H 0.407 0.593 30 H 0.066 0.934 31 H 0.089 0.911 32 H 0.077 0.923 33 H 0.081 0.919 34 H 0.090 0.910 35 H 0.068 0.932 36 H 0.067 0.933 37 H 0.057 0.943 38 H 0.056 0.944 39 H 0.078 0.922 40 H 0.390 0.610 41 H 0.071 0.929 42 H 0.073 0.927 43 H 0.059 0.941 44 H 0.079 0.921 45 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.328 -0.187 -9.161 9.169 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.173 4.173 3 Si 0.690 3.310 4 C -0.048 4.048 5 C -0.232 4.232 6 C -0.144 4.144 7 C -0.177 4.177 8 C 0.379 3.621 9 O -0.448 6.448 10 N -0.359 5.359 11 C 0.054 3.946 12 C -0.102 4.102 13 C -0.149 4.149 14 C -0.099 4.099 15 C -0.142 4.142 16 C -0.109 4.109 17 C -0.172 4.172 18 C 0.095 3.905 19 O -0.387 6.387 20 C -0.171 4.171 21 C -0.137 4.137 22 N -0.109 5.109 23 H 0.253 0.747 24 H 0.125 0.875 25 H -0.206 1.206 26 H -0.228 1.228 27 H 0.181 0.819 28 H 0.164 0.836 29 H 0.244 0.756 30 H 0.084 0.916 31 H 0.107 0.893 32 H 0.095 0.905 33 H 0.099 0.901 34 H 0.109 0.891 35 H 0.087 0.913 36 H 0.086 0.914 37 H 0.075 0.925 38 H 0.075 0.925 39 H 0.097 0.903 40 H 0.240 0.760 41 H 0.090 0.910 42 H 0.092 0.908 43 H 0.077 0.923 44 H 0.097 0.903 45 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges -0.067 0.262 -7.724 7.728 hybrid contribution -0.865 -0.555 -0.680 1.232 sum -0.932 -0.293 -8.403 8.460 Atomic orbital electron populations 1.86535 1.18086 1.80968 1.51596 1.24717 0.84397 1.12101 0.96096 0.93430 0.90330 0.70609 0.76649 1.20188 1.02581 0.83741 0.98323 1.20893 1.06905 1.00693 0.94707 1.21465 1.01574 0.90921 1.00434 1.20278 1.11000 0.95412 0.90975 1.17207 0.78043 0.82798 0.84054 1.90844 1.45890 1.85166 1.22880 1.45814 1.56945 1.08206 1.24907 1.20912 0.95518 0.81334 0.96803 1.21267 0.97445 0.94582 0.96909 1.21648 0.98207 1.01462 0.93554 1.21053 0.94453 0.93901 1.00503 1.21531 0.98789 1.00349 0.93547 1.21301 0.97039 0.95521 0.97025 1.22146 0.99230 0.95702 1.00126 1.21111 0.94702 0.82955 0.91776 1.86521 1.46901 1.30931 1.74320 1.22170 1.03074 0.97827 0.94056 1.21390 0.96875 0.94971 1.00485 1.41841 1.42515 1.09597 1.16961 0.74746 0.87458 1.20603 1.22787 0.81908 0.83571 0.75570 0.91597 0.89263 0.90457 0.90065 0.89137 0.91305 0.91387 0.92457 0.92518 0.90349 0.76026 0.90983 0.90803 0.92256 0.90274 0.73289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.52 12.86 -148.98 -1.92 -0.39 16 2 C -0.06 0.33 3.07 71.23 0.22 0.55 16 3 Si 0.79 -3.97 30.56 68.60 2.10 -1.88 16 4 C 0.07 -0.01 6.50 41.34 0.27 0.25 16 5 C -0.21 -0.45 9.32 22.01 0.21 -0.24 16 6 C -0.12 -0.70 10.65 22.57 0.24 -0.46 16 7 C -0.06 -0.29 7.06 40.35 0.28 -0.01 16 8 C 0.59 4.16 7.75 86.45 0.67 4.83 16 9 O -0.57 -8.95 16.55 -4.32 -0.07 -9.02 16 10 N -0.71 0.10 4.23 -446.50 -1.89 -1.79 16 11 C 0.16 0.21 2.05 44.99 0.09 0.31 16 12 C -0.08 0.22 2.88 -10.79 -0.03 0.19 16 13 C -0.11 0.73 5.02 30.59 0.15 0.88 16 14 C -0.08 0.46 3.19 -10.79 -0.03 0.42 16 15 C -0.10 0.36 5.04 30.59 0.15 0.51 16 16 C -0.09 -0.09 2.87 -10.79 -0.03 -0.12 16 17 C -0.13 -0.12 4.81 30.60 0.15 0.03 16 18 C 0.13 -0.02 1.15 -10.79 -0.01 -0.04 16 19 O -0.58 -1.27 12.98 -148.98 -1.93 -3.20 16 20 C -0.13 0.49 4.82 30.59 0.15 0.64 16 21 C -0.10 -0.04 4.84 30.60 0.15 0.11 16 22 N -0.51 0.61 5.99 -171.93 -1.03 -0.42 16 23 H 0.40 -4.30 8.74 -74.06 -0.65 -4.95 16 24 H 0.11 -1.14 7.96 -2.39 -0.02 -1.16 16 25 H -0.28 0.46 7.11 99.48 0.71 1.17 16 26 H -0.30 -1.06 7.11 99.48 0.71 -0.35 16 27 H 0.16 -0.24 6.19 -2.91 -0.02 -0.26 16 28 H 0.15 0.94 8.06 -2.91 -0.02 0.92 16 29 H 0.41 -2.50 6.00 -92.71 -0.56 -3.06 16 30 H 0.07 0.48 7.58 -2.39 -0.02 0.46 16 31 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 32 H 0.08 -0.76 6.51 -2.39 -0.02 -0.77 16 33 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 34 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 35 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 36 H 0.07 -0.28 7.60 -2.38 -0.02 -0.30 16 37 H 0.06 0.35 8.14 -2.39 -0.02 0.33 16 38 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 39 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 40 H 0.39 -1.89 9.05 -74.06 -0.67 -2.56 16 41 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 42 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 43 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 44 H 0.08 0.01 8.14 -2.39 -0.02 -0.01 16 45 H 0.43 -3.05 8.19 -92.70 -0.76 -3.81 16 Total: 0.00 -21.70 343.83 -3.67 -25.37 By element: Atomic # 1 Polarization: -14.97 SS G_CDS: -1.54 Total: -16.52 kcal Atomic # 6 Polarization: 5.23 SS G_CDS: 2.62 Total: 7.85 kcal Atomic # 7 Polarization: 0.71 SS G_CDS: -2.92 Total: -2.21 kcal Atomic # 8 Polarization: -8.69 SS G_CDS: -3.92 Total: -12.61 kcal Atomic # 14 Polarization: -3.97 SS G_CDS: 2.10 Total: -1.88 kcal Total: -21.70 -3.67 -25.37 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_6580494.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.498 kcal (2) G-P(sol) polarization free energy of solvation -21.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.201 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.367 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.866 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds