Wall clock time and date at job start Thu Mar 4 2021 18:05:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33809 * 122.45438 * 2 1 4 4 C 1.50705 * 124.51990 * 0.02562 * 3 2 1 5 5 O 1.42901 * 109.47190 * 329.99990 * 4 3 2 6 6 Si 1.86300 * 109.47146 * 210.00032 * 4 3 2 7 7 S 1.70615 * 110.96056 * 179.97438 * 3 2 1 8 8 C 1.75839 * 91.56068 * 0.02562 * 7 3 2 9 9 C 1.46578 * 125.45781 * 179.97438 * 8 7 3 10 10 O 1.21704 * 119.99876 * 180.02562 * 9 8 7 11 11 N 1.34780 * 120.00162 * 0.02772 * 9 8 7 12 12 C 1.46500 * 119.99944 * 180.02562 * 11 9 8 13 13 C 1.52997 * 109.46927 * 155.00048 * 12 11 9 14 14 C 1.52997 * 109.47457 * 59.99484 * 13 12 11 15 15 C 1.53002 * 109.46817 * 60.00169 * 14 13 12 16 16 C 1.52996 * 109.47346 * 299.99737 * 15 14 13 17 17 C 1.53002 * 109.46891 * 59.99997 * 16 15 14 18 18 C 1.52997 * 109.46978 * 60.00410 * 17 16 15 19 19 C 1.53006 * 109.47164 * 299.99874 * 18 17 16 20 20 O 1.42895 * 109.47000 * 180.02562 * 19 18 17 21 21 C 1.52997 * 109.47127 * 59.99836 * 19 18 17 22 22 C 1.52999 * 109.46623 * 299.99900 * 19 18 17 23 23 C 1.36646 * 109.08254 * 0.24046 * 8 7 3 24 24 H 1.08997 * 109.47289 * 89.99523 * 1 2 3 25 25 H 1.09000 * 109.47503 * 209.99980 * 1 2 3 26 26 H 1.09004 * 109.46721 * 330.00283 * 1 2 3 27 27 H 1.09001 * 109.47198 * 90.00041 * 4 3 2 28 28 H 0.96698 * 113.99917 * 180.02562 * 5 4 3 29 29 H 1.48508 * 109.99939 * 59.99845 * 6 4 3 30 30 H 1.48501 * 110.00221 * 181.31763 * 6 4 3 31 31 H 0.97001 * 119.99485 * 359.97438 * 11 9 8 32 32 H 1.09000 * 109.47381 * 34.99693 * 12 11 9 33 33 H 1.09001 * 109.46989 * 299.99155 * 13 12 11 34 34 H 1.08993 * 109.47194 * 299.99651 * 14 13 12 35 35 H 1.09002 * 109.46695 * 179.97438 * 14 13 12 36 36 H 1.09004 * 109.46733 * 179.97438 * 15 14 13 37 37 H 1.08992 * 109.47554 * 180.02562 * 16 15 14 38 38 H 1.09004 * 109.47108 * 300.00289 * 16 15 14 39 39 H 1.09002 * 109.47097 * 180.02562 * 17 16 15 40 40 H 1.09001 * 109.47375 * 59.99908 * 18 17 16 41 41 H 1.09000 * 109.47140 * 179.97438 * 18 17 16 42 42 H 0.96696 * 114.00485 * 299.99339 * 20 19 18 43 43 H 1.09002 * 109.47153 * 180.02562 * 21 19 18 44 44 H 1.09001 * 109.46832 * 60.00321 * 21 19 18 45 45 H 1.09000 * 109.47486 * 299.99829 * 22 19 18 46 46 H 1.09002 * 109.46716 * 179.97438 * 22 19 18 47 47 H 1.07999 * 123.35352 * 179.75508 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1291 0.0000 4 6 1.6356 2.5161 0.0006 5 8 0.3752 2.4983 -0.6726 6 14 2.7923 3.6828 -0.8778 7 16 3.8970 0.7891 0.0007 8 6 3.5937 -0.9429 0.0002 9 6 4.6230 -1.9864 0.0000 10 8 4.3000 -3.1598 -0.0008 11 7 5.9273 -1.6465 0.0007 12 6 6.9560 -2.6895 -0.0002 13 6 8.2450 -2.1338 -0.6089 14 6 8.7279 -0.9418 0.2198 15 6 8.9962 -1.3946 1.6564 16 6 7.7072 -1.9502 2.2652 17 6 7.2243 -3.1422 1.4365 18 6 8.2987 -4.2315 1.4357 19 6 9.5879 -3.6759 0.8270 20 8 10.5911 -4.6934 0.8257 21 6 10.0707 -2.4838 1.6556 22 6 9.3195 -3.2232 -0.6097 23 6 2.2446 -1.1602 -0.0059 24 1 -0.3634 0.0001 -1.0276 25 1 -0.3634 -0.8900 0.5138 26 1 -0.3633 0.8901 0.5138 27 1 1.4938 2.8502 1.0284 28 1 -0.0625 3.3597 -0.7107 29 1 2.9938 3.2381 -2.2804 30 1 2.2374 5.0601 -0.8564 31 1 6.1846 -0.7113 0.0010 32 1 6.6120 -3.5387 -0.5905 33 1 8.0539 -1.8113 -1.6324 34 1 7.9625 -0.1658 0.2203 35 1 9.6465 -0.5463 -0.2137 36 1 9.3407 -0.5454 2.2466 37 1 7.8982 -2.2723 3.2888 38 1 6.9417 -1.1741 2.2658 39 1 6.3058 -3.5378 1.8700 40 1 8.4899 -4.5541 2.4592 41 1 7.9546 -5.0809 0.8457 42 1 10.8125 -5.0287 1.7053 43 1 10.9888 -2.0877 1.2216 44 1 10.2619 -2.8064 2.6791 45 1 8.9755 -4.0724 -1.2000 46 1 10.2377 -2.8269 -1.0432 47 1 1.8018 -2.1452 -0.0112 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_6739946.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:35 Heat of formation + Delta-G solvation = -94.917201 kcal Electronic energy + Delta-G solvation = -30006.928911 eV Core-core repulsion = 26053.563098 eV Total energy + Delta-G solvation = -3953.365814 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.138 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.85638 -40.70975 -39.65508 -37.69476 -37.42380 -35.42786 -33.75573 -33.27256 -32.33141 -30.98216 -30.21324 -27.42316 -26.97781 -25.78125 -24.28131 -22.82381 -22.53385 -22.46732 -21.37524 -20.15060 -19.24243 -18.86441 -18.40378 -17.98893 -17.19648 -16.95052 -16.46803 -16.15927 -15.97701 -15.84952 -15.37320 -15.25464 -15.13289 -15.00336 -14.58632 -14.54545 -14.37079 -14.25812 -14.13248 -13.57239 -13.52729 -13.38081 -13.27882 -13.15402 -13.02192 -12.95092 -12.59154 -12.54093 -12.14477 -12.04727 -12.00424 -11.94890 -11.81520 -11.38206 -11.31662 -11.19143 -10.88416 -10.80023 -10.39650 -10.15485 -9.61699 -9.36090 -5.13253 -0.66910 0.27373 0.66944 1.05130 1.33490 1.52933 1.89687 1.94350 2.05933 3.14708 3.22948 3.40980 3.44730 3.62208 3.69372 3.82628 3.88446 3.97587 4.07060 4.10787 4.14150 4.19364 4.23730 4.26891 4.32095 4.38937 4.40849 4.54504 4.57218 4.61533 4.70584 4.78728 4.82119 4.85185 4.88066 4.97980 5.01396 5.01629 5.04829 5.05800 5.13495 5.17055 5.27625 5.33231 5.38282 5.39274 5.43159 5.47963 5.51175 6.33043 6.55218 6.86029 7.01103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C -0.111 4.111 3 C -0.204 4.204 4 C -0.041 4.041 5 O -0.542 6.542 6 Si 0.733 3.267 7 S 0.272 5.728 8 C -0.288 4.288 9 C 0.592 3.408 10 O -0.571 6.571 11 N -0.704 5.704 12 C 0.158 3.842 13 C -0.084 4.084 14 C -0.114 4.114 15 C -0.081 4.081 16 C -0.107 4.107 17 C -0.090 4.090 18 C -0.133 4.133 19 C 0.134 3.866 20 O -0.579 6.579 21 C -0.133 4.133 22 C -0.098 4.098 23 C -0.061 4.061 24 H 0.063 0.937 25 H 0.061 0.939 26 H 0.083 0.917 27 H 0.114 0.886 28 H 0.398 0.602 29 H -0.292 1.292 30 H -0.257 1.257 31 H 0.410 0.590 32 H 0.066 0.934 33 H 0.092 0.908 34 H 0.080 0.920 35 H 0.084 0.916 36 H 0.094 0.906 37 H 0.068 0.932 38 H 0.070 0.930 39 H 0.055 0.945 40 H 0.077 0.923 41 H 0.054 0.946 42 H 0.390 0.610 43 H 0.073 0.927 44 H 0.072 0.928 45 H 0.057 0.943 46 H 0.080 0.920 47 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.941 8.421 3.795 9.694 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.123 4.123 3 C -0.324 4.324 4 C -0.151 4.151 5 O -0.352 6.352 6 Si 0.634 3.366 7 S 0.540 5.460 8 C -0.407 4.407 9 C 0.379 3.621 10 O -0.452 6.452 11 N -0.356 5.356 12 C 0.053 3.947 13 C -0.103 4.103 14 C -0.151 4.151 15 C -0.099 4.099 16 C -0.144 4.144 17 C -0.110 4.110 18 C -0.172 4.172 19 C 0.094 3.906 20 O -0.387 6.387 21 C -0.171 4.171 22 C -0.137 4.137 23 C -0.095 4.095 24 H 0.081 0.919 25 H 0.080 0.920 26 H 0.102 0.898 27 H 0.132 0.868 28 H 0.250 0.750 29 H -0.219 1.219 30 H -0.182 1.182 31 H 0.248 0.752 32 H 0.084 0.916 33 H 0.110 0.890 34 H 0.099 0.901 35 H 0.103 0.897 36 H 0.112 0.888 37 H 0.087 0.913 38 H 0.089 0.911 39 H 0.073 0.927 40 H 0.096 0.904 41 H 0.073 0.927 42 H 0.239 0.761 43 H 0.091 0.909 44 H 0.091 0.909 45 H 0.076 0.924 46 H 0.099 0.901 47 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 4.295 8.566 2.434 9.887 hybrid contribution -2.781 -0.967 0.209 2.952 sum 1.514 7.600 2.643 8.188 Atomic orbital electron populations 1.20469 0.88458 1.02806 1.02307 1.18762 0.98962 0.90691 1.03866 1.23724 0.99460 0.99279 1.09927 1.24275 0.91521 0.96310 1.03036 1.86653 1.31970 1.37224 1.79400 0.94824 0.84404 0.76692 0.80678 1.82193 1.00598 0.95500 1.67660 1.24610 0.97549 0.98654 1.19924 1.17157 0.82488 0.87011 0.75456 1.90828 1.82342 1.20078 1.51964 1.45819 1.04257 1.10902 1.74574 1.20950 0.87110 0.90098 0.96511 1.21291 0.92237 0.96142 1.00650 1.21680 1.02623 0.96252 0.94543 1.21060 0.94241 0.97946 0.96663 1.21559 0.97465 0.96710 0.98710 1.21310 0.97795 0.96433 0.95452 1.22142 0.95415 0.97751 1.01859 1.21125 0.86408 0.87305 0.95761 1.86520 1.59298 1.57044 1.35831 1.22169 0.98967 0.95598 1.00357 1.21388 0.99142 0.98089 0.95034 1.20740 0.91539 1.00096 0.97147 0.91858 0.92022 0.89819 0.86821 0.75016 1.21910 1.18163 0.75195 0.91613 0.88964 0.90135 0.89734 0.88821 0.91298 0.91134 0.92667 0.90429 0.92680 0.76083 0.90855 0.90890 0.92378 0.90106 0.83991 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.22 8.70 71.24 0.62 0.40 16 2 C -0.11 -0.48 5.75 -21.05 -0.12 -0.60 16 3 C -0.20 -0.12 5.56 24.68 0.14 0.01 16 4 C -0.04 0.16 2.75 71.24 0.20 0.36 16 5 O -0.54 1.29 9.81 -148.98 -1.46 -0.17 16 6 Si 0.73 -3.58 31.31 68.60 2.15 -1.43 16 7 S 0.27 -0.74 19.80 -56.49 -1.12 -1.85 16 8 C -0.29 -1.40 6.45 24.07 0.16 -1.24 16 9 C 0.59 4.57 7.75 86.42 0.67 5.24 16 10 O -0.57 -9.36 16.50 -4.36 -0.07 -9.43 16 11 N -0.70 -0.58 4.23 -446.59 -1.89 -2.47 16 12 C 0.16 0.27 2.05 44.99 0.09 0.37 16 13 C -0.08 0.23 2.88 -10.79 -0.03 0.20 16 14 C -0.11 0.77 5.02 30.59 0.15 0.92 16 15 C -0.08 0.47 3.19 -10.79 -0.03 0.44 16 16 C -0.11 0.35 5.04 30.59 0.15 0.50 16 17 C -0.09 -0.13 2.87 -10.79 -0.03 -0.16 16 18 C -0.13 -0.15 4.81 30.60 0.15 0.00 16 19 C 0.13 -0.03 1.15 -10.79 -0.01 -0.04 16 20 O -0.58 -1.25 12.98 -148.98 -1.93 -3.18 16 21 C -0.13 0.52 4.82 30.59 0.15 0.66 16 22 C -0.10 -0.02 4.84 30.60 0.15 0.12 16 23 C -0.06 -0.41 9.80 21.72 0.21 -0.20 16 24 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 25 H 0.06 0.11 8.13 -2.39 -0.02 0.09 16 26 H 0.08 0.10 6.41 -2.38 -0.02 0.08 16 27 H 0.11 -1.00 7.96 -2.39 -0.02 -1.02 16 28 H 0.40 -4.20 8.74 -74.06 -0.65 -4.84 16 29 H -0.29 -1.07 7.11 99.48 0.71 -0.37 16 30 H -0.26 0.57 7.11 99.48 0.71 1.27 16 31 H 0.41 -1.99 5.98 -92.71 -0.55 -2.54 16 32 H 0.07 0.50 7.58 -2.39 -0.02 0.48 16 33 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 34 H 0.08 -0.79 6.51 -2.39 -0.02 -0.81 16 35 H 0.08 -0.67 8.14 -2.39 -0.02 -0.69 16 36 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 37 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 38 H 0.07 -0.28 7.60 -2.38 -0.02 -0.30 16 39 H 0.05 0.36 8.14 -2.39 -0.02 0.35 16 40 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 41 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 42 H 0.39 -1.87 9.05 -74.06 -0.67 -2.54 16 43 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 44 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 45 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 46 H 0.08 -0.02 8.14 -2.39 -0.02 -0.04 16 47 H 0.14 1.14 8.06 -2.91 -0.02 1.11 16 Total: 0.00 -20.24 366.00 -2.54 -22.78 By element: Atomic # 1 Polarization: -10.41 SS G_CDS: -0.82 Total: -11.23 kcal Atomic # 6 Polarization: 4.39 SS G_CDS: 2.60 Total: 6.99 kcal Atomic # 7 Polarization: -0.58 SS G_CDS: -1.89 Total: -2.47 kcal Atomic # 8 Polarization: -9.32 SS G_CDS: -3.47 Total: -12.78 kcal Atomic # 14 Polarization: -3.58 SS G_CDS: 2.15 Total: -1.43 kcal Atomic # 16 Polarization: -0.74 SS G_CDS: -1.12 Total: -1.85 kcal Total: -20.24 -2.54 -22.78 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_6739946.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.140 kcal (2) G-P(sol) polarization free energy of solvation -20.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.542 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.777 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds