Wall clock time and date at job start Thu Mar 4 2021 18:05:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86301 * 109.47093 * 2 1 4 4 C 1.50707 * 109.47214 * 119.99968 * 2 1 3 5 5 C 1.32763 * 124.70938 * 65.00484 * 4 2 1 6 6 C 1.44435 * 113.08351 * 180.02562 * 5 4 2 7 7 C 1.47190 * 123.46336 * 179.97438 * 6 5 4 8 8 O 1.21635 * 119.99941 * 359.97438 * 7 6 5 9 9 N 1.34769 * 119.99768 * 179.97438 * 7 6 5 10 10 C 1.46503 * 119.99689 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47195 * 275.00013 * 10 9 7 12 12 C 1.52997 * 109.47441 * 299.99897 * 11 10 9 13 13 C 1.53002 * 109.47302 * 300.00393 * 12 11 10 14 14 C 1.52997 * 109.47193 * 59.99455 * 13 12 11 15 15 C 1.52997 * 109.47441 * 300.00460 * 14 13 12 16 16 C 1.53003 * 109.46944 * 299.99742 * 15 14 13 17 17 C 1.53000 * 109.47167 * 60.00033 * 16 15 14 18 18 O 1.42900 * 109.47453 * 179.97438 * 17 16 15 19 19 C 1.53003 * 109.46951 * 300.00062 * 17 16 15 20 20 C 1.53002 * 109.47015 * 59.99722 * 17 16 15 21 21 C 1.36014 * 113.07385 * 359.97438 * 6 5 4 22 22 S 1.70444 * 110.81789 * 0.23282 * 21 6 5 23 23 H 0.96699 * 114.00047 * 60.00483 * 1 2 3 24 24 H 1.09001 * 109.47491 * 240.00056 * 2 1 3 25 25 H 1.48501 * 109.99841 * 60.00057 * 3 2 1 26 26 H 1.48499 * 110.00136 * 181.31797 * 3 2 1 27 27 H 1.07999 * 123.46132 * 359.97383 * 5 4 2 28 28 H 0.97004 * 120.00627 * 0.02562 * 9 7 6 29 29 H 1.09000 * 109.46972 * 35.00309 * 10 9 7 30 30 H 1.08992 * 109.47229 * 60.00066 * 11 10 9 31 31 H 1.08992 * 109.47804 * 180.02562 * 12 11 10 32 32 H 1.09001 * 109.46799 * 59.99964 * 12 11 10 33 33 H 1.09000 * 109.47212 * 179.97438 * 13 12 11 34 34 H 1.09001 * 109.47036 * 180.02562 * 14 13 12 35 35 H 1.09001 * 109.47153 * 60.00279 * 14 13 12 36 36 H 1.09001 * 109.47603 * 180.02562 * 15 14 13 37 37 H 1.08994 * 109.47180 * 179.97438 * 16 15 14 38 38 H 1.09001 * 109.47260 * 300.00082 * 16 15 14 39 39 H 0.96698 * 114.00056 * 60.00219 * 18 17 16 40 40 H 1.09001 * 109.47128 * 299.99737 * 19 17 16 41 41 H 1.09004 * 109.46999 * 179.97438 * 19 17 16 42 42 H 1.08994 * 109.47294 * 60.00482 * 20 17 16 43 43 H 1.09004 * 109.47128 * 180.02562 * 20 17 16 44 44 H 1.08002 * 124.58647 * 179.97438 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7485 -2.0003 1.4863 6 6 2.3356 -2.4181 2.7381 7 6 2.2685 -3.7982 3.2454 8 8 1.6955 -4.6559 2.6008 9 7 2.8421 -4.1114 4.4240 10 6 2.7748 -5.4850 4.9292 11 6 1.4588 -5.6874 5.6828 12 6 1.3873 -4.7084 6.8564 13 6 2.5618 -4.9613 7.8039 14 6 3.8778 -4.7589 7.0502 15 6 3.9492 -5.7379 5.8767 16 6 3.8791 -7.1724 6.4042 17 6 2.5631 -7.3749 7.1579 18 8 2.4972 -8.7148 7.6501 19 6 2.4916 -6.3958 8.3314 20 6 1.3887 -7.1218 6.2104 21 6 2.9567 -1.4051 3.4000 22 16 2.8340 0.0538 2.5272 23 1 -0.3933 0.4416 -0.7651 24 1 1.7923 -0.5138 -0.8900 25 1 1.5614 2.4679 1.2085 26 1 3.5345 1.7703 -0.0321 27 1 1.2149 -2.6684 0.8266 28 1 3.2988 -3.4274 4.9383 29 1 2.8257 -6.1825 4.0931 30 1 0.6222 -5.5071 5.0079 31 1 0.4500 -4.8528 7.3936 32 1 1.4373 -3.6864 6.4805 33 1 2.5111 -4.2635 8.6397 34 1 4.7144 -4.9395 7.7251 35 1 3.9278 -3.7370 6.6744 36 1 4.8870 -5.5940 5.3400 37 1 3.9296 -7.8698 5.5682 38 1 4.7158 -7.3526 7.0792 39 1 3.2127 -8.9460 8.2582 40 1 3.3283 -6.5760 9.0064 41 1 1.5538 -6.5397 8.8681 42 1 1.4395 -7.8193 5.3744 43 1 0.4511 -7.2656 6.7474 44 1 3.4562 -1.5101 4.3518 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15142604_6894386.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:39 Heat of formation + Delta-G solvation = -92.851223 kcal Electronic energy + Delta-G solvation = -27882.228421 eV Core-core repulsion = 24084.489813 eV Total energy + Delta-G solvation = -3797.738607 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.123 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.90217 -40.61923 -38.69263 -37.61461 -37.11428 -35.35338 -33.81740 -33.29503 -32.08821 -30.84604 -27.16710 -27.07537 -26.92272 -25.12195 -22.94907 -22.64415 -22.36966 -21.53527 -20.37068 -19.21970 -18.56238 -18.37646 -18.06560 -17.89264 -16.70911 -16.30332 -16.16077 -15.91489 -15.71592 -15.47329 -15.29671 -15.18446 -14.86918 -14.51288 -14.42199 -14.32288 -13.92153 -13.83636 -13.68237 -13.60809 -13.55108 -13.39121 -13.00835 -12.67630 -12.54261 -12.31142 -12.12231 -12.07148 -11.98941 -11.86812 -11.58948 -11.34458 -10.86374 -10.79062 -10.51781 -10.49730 -10.05540 -9.96404 -9.51939 -5.32160 -0.38373 0.34776 0.69858 0.90592 1.11846 1.50080 1.80829 2.08727 2.38014 3.08284 3.25248 3.32279 3.37178 3.60540 3.69321 3.79748 3.83513 3.88657 3.96679 4.04849 4.06810 4.10739 4.15505 4.17168 4.24988 4.31010 4.32658 4.46853 4.52486 4.63205 4.67456 4.70467 4.83378 4.88646 4.90521 4.92985 4.97891 5.02177 5.05126 5.10404 5.19131 5.21215 5.28902 5.34284 5.40047 5.50844 6.45988 6.50771 6.70278 7.23054 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.035 4.035 3 Si 0.670 3.330 4 C -0.197 4.197 5 C -0.049 4.049 6 C -0.153 4.153 7 C 0.580 3.420 8 O -0.529 6.529 9 N -0.719 5.719 10 C 0.157 3.843 11 C -0.093 4.093 12 C -0.110 4.110 13 C -0.084 4.084 14 C -0.112 4.112 15 C -0.091 4.091 16 C -0.135 4.135 17 C 0.135 3.865 18 O -0.559 6.559 19 C -0.137 4.137 20 C -0.097 4.097 21 C -0.204 4.204 22 S 0.175 5.825 23 H 0.385 0.615 24 H 0.085 0.915 25 H -0.234 1.234 26 H -0.239 1.239 27 H 0.158 0.842 28 H 0.397 0.603 29 H 0.093 0.907 30 H 0.084 0.916 31 H 0.067 0.933 32 H 0.064 0.936 33 H 0.076 0.924 34 H 0.070 0.930 35 H 0.061 0.939 36 H 0.081 0.919 37 H 0.075 0.925 38 H 0.072 0.928 39 H 0.376 0.624 40 H 0.066 0.934 41 H 0.072 0.928 42 H 0.073 0.927 43 H 0.074 0.926 44 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.130 4.786 0.162 5.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.148 4.148 3 Si 0.569 3.431 4 C -0.313 4.313 5 C -0.078 4.078 6 C -0.172 4.172 7 C 0.365 3.635 8 O -0.406 6.406 9 N -0.371 5.371 10 C 0.053 3.947 11 C -0.113 4.113 12 C -0.148 4.148 13 C -0.103 4.103 14 C -0.150 4.150 15 C -0.110 4.110 16 C -0.173 4.173 17 C 0.094 3.906 18 O -0.365 6.365 19 C -0.175 4.175 20 C -0.135 4.135 21 C -0.342 4.342 22 S 0.441 5.559 23 H 0.233 0.767 24 H 0.103 0.897 25 H -0.157 1.157 26 H -0.162 1.162 27 H 0.176 0.824 28 H 0.233 0.767 29 H 0.111 0.889 30 H 0.102 0.898 31 H 0.086 0.914 32 H 0.083 0.917 33 H 0.094 0.906 34 H 0.089 0.911 35 H 0.080 0.920 36 H 0.100 0.900 37 H 0.094 0.906 38 H 0.090 0.910 39 H 0.223 0.777 40 H 0.084 0.916 41 H 0.091 0.909 42 H 0.092 0.908 43 H 0.093 0.907 44 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 3.279 5.918 0.566 6.789 hybrid contribution 0.332 -1.601 0.631 1.753 sum 3.612 4.317 1.197 5.754 Atomic orbital electron populations 1.86523 1.16751 1.81854 1.49791 1.23997 0.85952 1.09672 0.95152 0.94706 0.81869 0.78129 0.88360 1.23423 1.09287 0.97257 1.01354 1.21045 0.97318 0.94369 0.95064 1.20259 1.05405 0.94127 0.97365 1.17571 0.78387 0.86910 0.80617 1.90823 1.42719 1.49440 1.57622 1.45933 1.57730 1.11817 1.21662 1.20970 0.94449 0.83054 0.96251 1.21419 0.98223 0.94608 0.97019 1.21568 0.98314 0.99096 0.95807 1.21050 0.94810 0.96555 0.97886 1.21610 0.97896 0.98530 0.96938 1.21290 0.98172 0.95526 0.95975 1.22160 0.97924 0.96074 1.01117 1.21105 0.94828 0.81770 0.92884 1.86579 1.53933 1.29441 1.66506 1.22202 1.02821 0.94813 0.97631 1.21383 0.97622 0.95818 0.98640 1.25780 1.05152 0.98335 1.04918 1.83181 1.51323 1.09902 1.11486 0.76686 0.89723 1.15722 1.16243 0.82410 0.76707 0.88891 0.89776 0.91402 0.91713 0.90578 0.91083 0.92034 0.90016 0.90597 0.90963 0.77654 0.91570 0.90909 0.90816 0.90694 0.81210 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.05 12.86 -35.23 -0.45 -0.50 16 2 C -0.03 0.01 2.93 36.01 0.11 0.12 16 3 Si 0.67 -1.14 30.92 -169.99 -5.26 -6.39 16 4 C -0.20 -0.40 5.69 -36.18 -0.21 -0.60 16 5 C -0.05 -0.15 9.95 -39.02 -0.39 -0.54 16 6 C -0.15 -0.38 5.98 -104.62 -0.63 -1.00 16 7 C 0.58 1.98 7.76 -12.63 -0.10 1.88 16 8 O -0.53 -3.76 16.46 5.25 0.09 -3.68 16 9 N -0.72 -0.22 4.20 -54.96 -0.23 -0.45 16 10 C 0.16 0.08 2.05 -67.93 -0.14 -0.06 16 11 C -0.09 -0.08 2.87 -90.62 -0.26 -0.34 16 12 C -0.11 0.04 5.04 -26.73 -0.13 -0.09 16 13 C -0.08 0.12 3.20 -90.62 -0.29 -0.16 16 14 C -0.11 0.26 5.02 -26.73 -0.13 0.12 16 15 C -0.09 0.12 2.88 -90.62 -0.26 -0.14 16 16 C -0.13 0.12 4.81 -26.73 -0.13 0.00 16 17 C 0.13 0.01 1.15 -90.62 -0.10 -0.10 16 18 O -0.56 -0.63 12.98 -35.23 -0.46 -1.09 16 19 C -0.14 0.13 4.82 -26.73 -0.13 0.00 16 20 C -0.10 -0.12 4.84 -26.73 -0.13 -0.25 16 21 C -0.20 -0.03 10.38 29.93 0.31 0.28 16 22 S 0.18 0.16 20.20 -107.50 -2.17 -2.02 16 23 H 0.38 -1.98 8.74 45.56 0.40 -1.58 16 24 H 0.09 -0.17 7.96 -51.93 -0.41 -0.58 16 25 H -0.23 -0.25 7.11 56.52 0.40 0.15 16 26 H -0.24 -0.08 7.11 56.52 0.40 0.32 16 27 H 0.16 0.56 8.06 -52.49 -0.42 0.13 16 28 H 0.40 -0.81 5.36 -40.82 -0.22 -1.03 16 29 H 0.09 0.24 7.58 -51.93 -0.39 -0.16 16 30 H 0.08 0.24 8.14 -51.93 -0.42 -0.18 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.06 -0.03 7.60 -51.93 -0.39 -0.42 16 33 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 35 H 0.06 -0.19 6.51 -51.93 -0.34 -0.53 16 36 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.38 -0.95 9.05 45.56 0.41 -0.54 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 42 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 43 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 44 H 0.17 -0.51 7.01 -52.49 -0.37 -0.88 16 LS Contribution 348.63 15.07 5.25 5.25 Total: 0.00 -8.29 348.63 -11.43 -19.71 By element: Atomic # 1 Polarization: -4.36 SS G_CDS: -5.59 Total: -9.94 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -2.61 Total: -0.91 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -0.23 Total: -0.45 kcal Atomic # 8 Polarization: -4.44 SS G_CDS: -0.82 Total: -5.26 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: -5.26 Total: -6.39 kcal Atomic # 16 Polarization: 0.16 SS G_CDS: -2.17 Total: -2.02 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -8.29 -11.43 -19.71 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_6894386.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.137 kcal (2) G-P(sol) polarization free energy of solvation -8.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.424 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.714 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds