Wall clock time and date at job start Thu Mar 4 2021 18:05:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37939 * 120.07325 * 2 1 4 4 C 1.38380 * 120.14657 * 180.27282 * 3 2 1 5 5 C 1.50706 * 119.85363 * 179.71965 * 4 3 2 6 6 C 1.38333 * 120.29032 * 359.74439 * 4 3 2 7 7 C 1.50707 * 119.92723 * 179.97438 * 6 4 3 8 8 O 1.42902 * 109.46832 * 284.97663 * 7 6 4 9 9 Si 1.86300 * 109.47222 * 164.97711 * 7 6 4 10 10 C 1.37979 * 120.14851 * 359.97438 * 6 4 3 11 11 C 1.39560 * 119.84934 * 0.02562 * 10 6 4 12 12 C 1.47845 * 120.14229 * 179.97438 * 11 10 6 13 13 O 1.21555 * 119.99910 * 173.75232 * 12 11 10 14 14 N 1.34775 * 120.00166 * 353.74921 * 12 11 10 15 15 C 1.46499 * 119.99985 * 179.97438 * 14 12 11 16 16 C 1.53000 * 109.46754 * 155.00392 * 15 14 12 17 17 C 1.53002 * 109.47469 * 60.00397 * 16 15 14 18 18 C 1.53000 * 109.47126 * 59.99673 * 17 16 15 19 19 C 1.53000 * 109.47213 * 300.00483 * 18 17 16 20 20 C 1.52995 * 109.47518 * 275.00120 * 15 14 12 21 21 C 1.52996 * 109.47559 * 180.02562 * 20 15 14 22 22 C 1.53000 * 109.47072 * 59.99995 * 21 20 15 23 23 O 1.42900 * 109.47484 * 180.02562 * 22 21 20 24 24 C 1.52998 * 109.47113 * 60.00126 * 22 21 20 25 25 C 1.53000 * 109.47260 * 300.00396 * 22 21 20 26 26 H 1.08996 * 109.47254 * 263.66486 * 1 2 3 27 27 H 1.08996 * 109.47189 * 23.67099 * 1 2 3 28 28 H 1.09001 * 109.46799 * 143.66673 * 1 2 3 29 29 H 1.08001 * 119.92505 * 0.02562 * 3 2 1 30 30 H 1.09000 * 109.47004 * 270.02154 * 5 4 3 31 31 H 1.08998 * 109.46930 * 30.02003 * 5 4 3 32 32 H 1.09000 * 109.46692 * 150.02465 * 5 4 3 33 33 H 1.08998 * 109.46574 * 44.97722 * 7 6 4 34 34 H 0.96702 * 114.00198 * 59.99985 * 8 7 6 35 35 H 1.48496 * 109.99941 * 178.68017 * 9 7 6 36 36 H 1.48504 * 109.99901 * 300.00065 * 9 7 6 37 37 H 1.07996 * 120.07306 * 180.02562 * 10 6 4 38 38 H 0.97002 * 119.99903 * 0.02562 * 14 12 11 39 39 H 1.08998 * 109.47219 * 35.00898 * 15 14 12 40 40 H 1.09002 * 109.47582 * 299.99917 * 16 15 14 41 41 H 1.09004 * 109.46938 * 299.99701 * 17 16 15 42 42 H 1.08997 * 109.47399 * 180.02562 * 17 16 15 43 43 H 1.09000 * 109.47021 * 180.02562 * 18 17 16 44 44 H 1.08997 * 109.47122 * 180.02562 * 19 18 17 45 45 H 1.09004 * 109.46796 * 299.99939 * 19 18 17 46 46 H 1.09007 * 109.47218 * 59.99835 * 20 15 14 47 47 H 1.08996 * 109.47710 * 180.02562 * 21 20 15 48 48 H 1.08998 * 109.47159 * 300.00767 * 21 20 15 49 49 H 0.96707 * 113.99328 * 299.99823 * 23 22 21 50 50 H 1.08998 * 109.47589 * 179.97438 * 24 22 21 51 51 H 1.09006 * 109.47131 * 60.00253 * 24 22 21 52 52 H 1.09000 * 109.47021 * 299.99871 * 25 22 21 53 53 H 1.08997 * 109.47393 * 179.97438 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1955 -0.0057 5 6 4.3305 2.5035 -0.0121 6 6 4.2813 0.0019 -0.0061 7 6 5.7883 0.0134 -0.0129 8 8 6.2560 0.3622 -1.3174 9 14 6.4243 -1.6772 0.4434 10 6 3.6021 -1.1992 -0.0003 11 6 2.2065 -1.2080 0.0055 12 6 1.4722 -2.4912 0.0112 13 8 0.2626 -2.4987 0.1307 14 7 2.1440 -3.6526 -0.1163 15 6 1.4164 -4.9241 -0.1101 16 6 2.2302 -5.9809 -0.8596 17 6 3.5842 -6.1649 -0.1713 18 6 3.3646 -6.6198 1.2728 19 6 2.5509 -5.5630 2.0224 20 6 1.1969 -5.3791 1.3341 21 6 0.4376 -6.7074 1.3405 22 6 1.2518 -7.7639 0.5911 23 8 0.5424 -9.0044 0.5966 24 6 2.6058 -7.9472 1.2795 25 6 1.4714 -7.3090 -0.8530 26 1 -0.3633 -0.1134 1.0213 27 1 -0.3633 0.9412 -0.4126 28 1 -0.3633 -0.8279 -0.6089 29 1 1.6582 2.1290 0.0004 30 1 4.5064 2.8165 -1.0412 31 1 3.7407 3.2621 0.5026 32 1 5.2857 2.3779 0.4978 33 1 6.1492 0.7448 0.7102 34 1 5.9626 1.2322 -1.6208 35 1 7.9088 -1.6876 0.4093 36 1 5.9447 -2.0517 1.7981 37 1 4.1492 -2.1303 -0.0002 38 1 3.1093 -3.6466 -0.2114 39 1 0.4518 -4.7932 -0.6004 40 1 2.3866 -5.6569 -1.8885 41 1 4.1256 -5.2188 -0.1759 42 1 4.1641 -6.9174 -0.7056 43 1 4.3293 -6.7504 1.7633 44 1 2.3948 -5.8869 3.0513 45 1 3.0922 -4.6169 2.0178 46 1 0.6172 -4.6262 1.8681 47 1 0.2807 -7.0313 2.3693 48 1 -0.5270 -6.5768 0.8500 49 1 0.3675 -9.3535 1.4814 50 1 3.1858 -8.7002 0.7460 51 1 2.4494 -8.2714 2.3084 52 1 0.5068 -7.1784 -1.3435 53 1 2.0518 -8.0614 -1.3868 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_9599494.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:48 Heat of formation + Delta-G solvation = -105.567072 kcal Electronic energy + Delta-G solvation = -34482.863825 eV Core-core repulsion = 30284.346332 eV Total energy + Delta-G solvation = -4198.517492 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.198 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -42.86557 -41.50387 -39.93227 -37.78363 -37.45351 -35.55504 -34.34402 -33.73656 -33.69488 -32.87201 -31.08978 -29.31593 -28.59781 -26.96070 -26.56479 -25.50281 -23.79524 -22.97183 -22.74770 -22.49221 -21.69128 -20.89308 -19.20974 -18.51075 -18.24330 -17.95972 -17.09473 -16.63568 -16.40190 -16.23029 -16.18597 -15.83859 -15.53447 -15.37470 -15.22558 -15.12144 -14.87506 -14.79547 -14.56900 -14.39662 -14.14593 -14.07020 -13.84274 -13.58542 -13.50707 -13.47550 -13.33825 -13.06134 -12.90279 -12.75615 -12.71278 -12.56503 -12.50431 -12.13337 -12.00548 -11.92874 -11.79656 -11.36138 -11.33907 -11.22266 -11.19406 -10.82683 -10.69474 -10.38407 -10.08599 -9.89895 -9.62167 -4.98363 -0.27954 0.15581 1.33877 1.57613 1.74539 1.93474 2.04730 2.63556 3.16635 3.43108 3.45195 3.47133 3.54686 3.61896 3.76712 3.82445 3.84708 3.91264 3.99226 4.05867 4.10064 4.10416 4.17446 4.20905 4.26250 4.28413 4.36108 4.41370 4.48399 4.51952 4.59279 4.63658 4.65356 4.69154 4.72085 4.77285 4.80715 4.85260 4.90134 5.02347 5.03167 5.04717 5.05240 5.07307 5.07972 5.14891 5.18313 5.21516 5.34432 5.36154 5.40695 5.42254 5.49381 5.51082 5.55131 5.78000 6.46476 6.59102 6.85859 7.15680 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.028 4.028 3 C -0.134 4.134 4 C -0.043 4.043 5 C -0.130 4.130 6 C -0.137 4.137 7 C -0.085 4.085 8 O -0.544 6.544 9 Si 0.790 3.210 10 C -0.065 4.065 11 C -0.156 4.156 12 C 0.557 3.443 13 O -0.561 6.561 14 N -0.707 5.707 15 C 0.159 3.841 16 C -0.084 4.084 17 C -0.116 4.116 18 C -0.083 4.083 19 C -0.108 4.108 20 C -0.089 4.089 21 C -0.132 4.132 22 C 0.134 3.866 23 O -0.579 6.579 24 C -0.133 4.133 25 C -0.098 4.098 26 H 0.068 0.932 27 H 0.073 0.927 28 H 0.077 0.923 29 H 0.147 0.853 30 H 0.095 0.905 31 H 0.081 0.919 32 H 0.076 0.924 33 H 0.084 0.916 34 H 0.375 0.625 35 H -0.292 1.292 36 H -0.260 1.260 37 H 0.147 0.853 38 H 0.410 0.590 39 H 0.068 0.932 40 H 0.096 0.904 41 H 0.083 0.917 42 H 0.085 0.915 43 H 0.090 0.910 44 H 0.064 0.936 45 H 0.068 0.932 46 H 0.055 0.945 47 H 0.074 0.926 48 H 0.056 0.944 49 H 0.389 0.611 50 H 0.073 0.927 51 H 0.069 0.931 52 H 0.059 0.941 53 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.503 1.122 0.278 4.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.029 4.029 3 C -0.151 4.151 4 C -0.043 4.043 5 C -0.187 4.187 6 C -0.137 4.137 7 C -0.193 4.193 8 O -0.352 6.352 9 Si 0.692 3.308 10 C -0.083 4.083 11 C -0.159 4.159 12 C 0.346 3.654 13 O -0.442 6.442 14 N -0.359 5.359 15 C 0.055 3.945 16 C -0.103 4.103 17 C -0.154 4.154 18 C -0.101 4.101 19 C -0.146 4.146 20 C -0.109 4.109 21 C -0.171 4.171 22 C 0.094 3.906 23 O -0.387 6.387 24 C -0.171 4.171 25 C -0.136 4.136 26 H 0.086 0.914 27 H 0.092 0.908 28 H 0.096 0.904 29 H 0.165 0.835 30 H 0.113 0.887 31 H 0.100 0.900 32 H 0.095 0.905 33 H 0.102 0.898 34 H 0.224 0.776 35 H -0.219 1.219 36 H -0.186 1.186 37 H 0.164 0.836 38 H 0.249 0.751 39 H 0.086 0.914 40 H 0.114 0.886 41 H 0.102 0.898 42 H 0.104 0.896 43 H 0.108 0.892 44 H 0.083 0.917 45 H 0.086 0.914 46 H 0.074 0.926 47 H 0.092 0.908 48 H 0.075 0.925 49 H 0.238 0.762 50 H 0.091 0.909 51 H 0.088 0.912 52 H 0.077 0.923 53 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 4.433 0.147 0.308 4.446 hybrid contribution -0.359 1.670 1.074 2.018 sum 4.074 1.818 1.382 4.670 Atomic orbital electron populations 1.21005 0.90164 1.03235 1.02951 1.20224 0.96959 0.92033 0.93680 1.21187 0.93699 0.97983 1.02272 1.20253 0.93703 0.95833 0.94537 1.21075 1.00430 0.92927 1.04222 1.20150 0.96421 0.93099 1.04030 1.25559 0.91728 1.13491 0.88508 1.86754 1.75829 1.41122 1.31457 0.92461 0.77700 0.79507 0.81175 1.21151 0.92416 0.97981 0.96758 1.19712 0.93696 0.92993 1.09543 1.18418 0.86785 0.84342 0.75833 1.90738 1.15100 1.87556 1.50787 1.45916 1.11463 1.04836 1.73707 1.20891 0.95670 0.82262 0.95702 1.21280 0.95566 0.93031 1.00381 1.21711 0.95563 1.03048 0.95038 1.21049 0.99074 0.93646 0.96321 1.21564 0.94633 0.99442 0.98957 1.21297 0.97257 0.96345 0.95990 1.22127 0.98685 0.95061 1.01203 1.21134 0.90720 0.82979 0.95770 1.86525 1.78393 1.38563 1.35205 1.22147 0.95764 0.98162 1.01036 1.21377 1.00766 0.96632 0.94818 0.91383 0.90769 0.90417 0.83514 0.88662 0.89973 0.90526 0.89835 0.77556 1.21903 1.18576 0.83564 0.75112 0.91363 0.88621 0.89828 0.89647 0.89152 0.91694 0.91359 0.92641 0.90779 0.92521 0.76174 0.90881 0.91189 0.92270 0.90212 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.58 8.73 71.24 0.62 0.04 16 2 C -0.03 -0.11 5.91 -19.61 -0.12 -0.23 16 3 C -0.13 -0.05 9.31 22.23 0.21 0.16 16 4 C -0.04 0.06 5.87 -19.81 -0.12 -0.05 16 5 C -0.13 0.86 8.73 71.24 0.62 1.48 16 6 C -0.14 0.13 5.26 -19.90 -0.10 0.02 16 7 C -0.08 0.19 2.09 71.24 0.15 0.34 16 8 O -0.54 0.71 12.65 -148.98 -1.89 -1.18 16 9 Si 0.79 -2.27 30.17 68.60 2.07 -0.20 16 10 C -0.07 0.05 8.13 22.53 0.18 0.23 16 11 C -0.16 -0.55 5.87 -20.09 -0.12 -0.67 16 12 C 0.56 3.07 7.66 86.79 0.67 3.74 16 13 O -0.56 -6.89 13.02 -3.89 -0.05 -6.94 16 14 N -0.71 0.39 4.18 -445.42 -1.86 -1.47 16 15 C 0.16 0.08 2.05 44.99 0.09 0.17 16 16 C -0.08 0.29 2.88 -10.81 -0.03 0.26 16 17 C -0.12 0.81 5.02 30.59 0.15 0.97 16 18 C -0.08 0.44 3.19 -10.83 -0.03 0.41 16 19 C -0.11 0.30 5.03 30.59 0.15 0.45 16 20 C -0.09 -0.08 2.88 -10.80 -0.03 -0.11 16 21 C -0.13 -0.11 4.81 30.59 0.15 0.04 16 22 C 0.13 -0.04 1.15 -10.79 -0.01 -0.06 16 23 O -0.58 -1.24 12.98 -148.98 -1.93 -3.17 16 24 C -0.13 0.46 4.81 30.56 0.15 0.61 16 25 C -0.10 0.03 4.84 30.58 0.15 0.18 16 26 H 0.07 0.43 8.14 -2.39 -0.02 0.41 16 27 H 0.07 0.09 8.04 -2.39 -0.02 0.07 16 28 H 0.08 0.71 5.87 -2.39 -0.01 0.69 16 29 H 0.15 -0.48 8.06 -2.91 -0.02 -0.50 16 30 H 0.09 -0.88 7.77 -2.39 -0.02 -0.90 16 31 H 0.08 -0.60 8.08 -2.39 -0.02 -0.62 16 32 H 0.08 -0.55 6.22 -2.39 -0.01 -0.57 16 33 H 0.08 -0.31 6.48 -2.39 -0.02 -0.33 16 34 H 0.37 -2.48 7.71 -74.06 -0.57 -3.06 16 35 H -0.29 -1.17 7.11 99.48 0.71 -0.47 16 36 H -0.26 0.15 7.11 99.48 0.71 0.86 16 37 H 0.15 -0.92 3.52 -2.91 -0.01 -0.93 16 38 H 0.41 -2.47 4.94 -92.71 -0.46 -2.93 16 39 H 0.07 0.39 7.58 -2.39 -0.02 0.38 16 40 H 0.10 -0.47 8.14 -2.39 -0.02 -0.49 16 41 H 0.08 -0.88 6.51 -2.39 -0.02 -0.90 16 42 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 43 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 44 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 45 H 0.07 -0.22 7.60 -2.39 -0.02 -0.24 16 46 H 0.06 0.33 8.14 -2.38 -0.02 0.31 16 47 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 48 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 49 H 0.39 -1.79 9.05 -74.05 -0.67 -2.46 16 50 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 51 H 0.07 -0.29 8.14 -2.38 -0.02 -0.31 16 52 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 53 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 Total: 0.00 -16.92 386.57 -1.64 -18.56 By element: Atomic # 1 Polarization: -12.88 SS G_CDS: -0.71 Total: -13.59 kcal Atomic # 6 Polarization: 5.26 SS G_CDS: 2.73 Total: 7.98 kcal Atomic # 7 Polarization: 0.39 SS G_CDS: -1.86 Total: -1.47 kcal Atomic # 8 Polarization: -7.42 SS G_CDS: -3.87 Total: -11.29 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: 2.07 Total: -0.20 kcal Total: -16.92 -1.64 -18.56 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_9599494.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.006 kcal (2) G-P(sol) polarization free energy of solvation -16.919 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.925 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.642 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.561 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.567 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds