Wall clock time and date at job start Thu Mar 4 2021 21:25:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 N 1.28467 * 124.88391 * 2 1 4 4 C 1.31809 * 110.07008 * 179.97438 * 3 2 1 5 5 C 1.47709 * 126.51383 * 180.02562 * 4 3 2 6 6 O 1.21570 * 119.99817 * 179.97438 * 5 4 3 7 7 N 1.34777 * 120.00193 * 359.97438 * 5 4 3 8 8 C 1.46495 * 120.00107 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.85263 * 23.79800 * 8 7 5 10 10 C 1.53788 * 113.61601 * 154.99587 * 8 7 5 11 11 C 1.53785 * 87.07710 * 89.11649 * 10 8 7 12 12 H 1.08996 * 113.61325 * 270.79762 * 11 10 8 13 13 C 1.50703 * 113.61275 * 139.98417 * 11 10 8 14 14 C 1.38364 * 119.84585 * 299.72268 * 13 11 10 15 15 C 1.37954 * 120.15221 * 179.76559 * 14 13 11 16 16 C 1.39624 * 119.84128 * 0.53049 * 15 14 13 17 17 C 1.43201 * 120.15198 * 179.74647 * 16 15 14 18 18 N 9.69808 * 136.66570 * 201.61658 * 7 1 2 19 19 C 1.39640 * 119.70367 * 359.72335 * 16 15 14 20 20 C 1.37939 * 119.84480 * 0.02562 * 19 16 15 21 21 C 1.53780 * 87.08420 * 25.43304 * 11 10 8 22 22 C 1.41498 * 106.96509 * 359.74661 * 4 3 2 23 23 C 1.35032 * 124.88310 * 179.97438 * 2 1 3 24 24 C 1.50698 * 126.38858 * 0.03166 * 23 2 1 25 25 O 1.42905 * 109.47321 * 330.00493 * 24 23 2 26 26 Si 1.86295 * 109.47516 * 210.00382 * 24 23 2 27 27 H 1.09004 * 109.47083 * 270.04000 * 1 2 3 28 28 H 1.08995 * 109.47016 * 30.04138 * 1 2 3 29 29 H 1.09001 * 109.46846 * 150.04215 * 1 2 3 30 30 H 0.96998 * 120.00315 * 359.97438 * 7 5 4 31 31 H 1.08996 * 113.61373 * 203.66296 * 10 8 7 32 32 H 1.08999 * 113.61269 * 334.48478 * 10 8 7 33 33 H 1.08003 * 119.92474 * 0.02562 * 14 13 11 34 34 H 1.07991 * 120.07433 * 180.25372 * 15 14 13 35 35 H 1.08001 * 120.07673 * 180.02562 * 19 16 15 36 36 H 1.07995 * 119.93024 * 179.97438 * 20 19 16 37 37 H 1.09000 * 113.61510 * 220.02031 * 21 11 10 38 38 H 1.09008 * 113.61477 * 89.11282 * 21 11 10 39 39 H 1.08000 * 127.24665 * 180.30277 * 22 4 3 40 40 H 1.09001 * 109.47122 * 90.00592 * 24 23 2 41 41 H 0.96696 * 114.00036 * 299.99741 * 25 24 23 42 42 H 1.48504 * 110.00018 * 58.68178 * 26 24 23 43 43 H 1.48496 * 110.00262 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7168 0.0006 5 6 4.6273 1.6398 0.0013 6 8 5.7597 1.1976 0.0022 7 7 4.4241 2.9722 0.0009 8 6 5.5678 3.8875 0.0010 9 1 6.4727 3.4344 -0.4039 10 6 5.2511 5.2694 -0.5950 11 6 4.8389 5.6992 0.8229 12 1 3.7882 5.5148 1.0469 13 6 5.2773 7.0957 1.1817 14 6 6.6235 7.4156 1.1839 15 6 7.0315 8.6932 1.5067 16 6 6.0832 9.6615 1.8425 17 6 6.4998 10.9883 2.1840 18 7 6.8291 12.0410 2.4554 19 6 4.7267 9.3303 1.8434 20 6 4.3323 8.0503 1.5136 21 6 5.7835 4.6037 1.3447 22 6 3.5272 -0.6972 0.0069 23 6 2.2373 -1.1077 0.0005 24 6 1.7534 -2.5349 0.0005 25 8 0.4951 -2.6113 0.6735 26 14 2.9941 -3.6114 0.8795 27 1 -0.3633 0.0007 1.0277 28 1 -0.3633 0.8896 -0.5145 29 1 -0.3633 -0.8904 -0.5132 30 1 3.5206 3.3250 -0.0002 31 1 6.1289 5.7938 -0.9723 32 1 4.4257 5.2590 -1.3068 33 1 7.3562 6.6644 0.9282 34 1 8.0822 8.9426 1.5041 35 1 3.9880 10.0746 2.1018 36 1 3.2835 7.7926 1.5142 37 1 5.3870 4.0562 2.1998 38 1 6.8071 4.9462 1.4976 39 1 4.4108 -1.3181 0.0136 40 1 1.6373 -2.8792 -1.0272 41 1 0.5236 -2.3198 1.5950 42 1 3.1851 -3.1329 2.2723 43 1 2.5288 -5.0215 0.8857 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15505404_13259642.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 21:25:00 Heat of formation + Delta-G solvation = 102.187598 kcal Electronic energy + Delta-G solvation = -27348.032999 eV Core-core repulsion = 23362.863320 eV Total energy + Delta-G solvation = -3985.169679 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.137 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.81779 -41.51284 -40.31844 -38.97162 -38.14477 -37.43377 -34.73252 -34.23426 -32.65880 -32.13086 -31.84611 -28.63432 -27.04474 -26.62194 -26.49654 -24.54507 -23.70917 -23.03769 -22.17855 -21.05130 -20.25531 -19.82599 -19.16865 -17.75703 -17.61193 -17.15559 -17.08621 -16.66334 -16.50692 -16.03859 -15.70476 -15.67602 -15.56295 -15.32847 -15.13883 -14.83781 -14.67975 -14.52345 -14.29828 -14.06915 -14.02275 -13.76870 -13.62510 -13.38299 -13.38046 -13.14322 -12.91022 -12.67244 -12.26067 -12.20001 -11.98447 -11.81088 -11.64952 -11.27852 -11.15208 -11.05928 -10.26339 -9.97959 -9.95081 -9.91868 -9.63474 -4.87538 -0.21797 0.44206 0.46474 0.84429 1.24508 1.56289 1.57780 1.68901 1.89512 1.95893 2.12899 2.32511 2.86218 2.87289 3.11290 3.33789 3.37192 3.51895 3.73068 3.77743 3.93769 4.00225 4.02500 4.05846 4.28906 4.31877 4.38160 4.43775 4.46683 4.51411 4.53554 4.66692 4.70861 4.74410 4.82619 4.87797 4.93839 4.97334 5.10968 5.14571 5.22195 5.28526 5.31140 5.38761 5.56412 5.68628 5.72652 5.90589 6.29288 6.41015 6.42275 6.84421 7.15814 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.264 5.264 3 N -0.263 5.263 4 C -0.040 4.040 5 C 0.607 3.393 6 O -0.564 6.564 7 N -0.690 5.690 8 C 0.110 3.890 9 H 0.094 0.906 10 C -0.123 4.123 11 C -0.071 4.071 12 H 0.111 0.889 13 C -0.037 4.037 14 C -0.120 4.120 15 C -0.067 4.067 16 C -0.054 4.054 17 C 0.277 3.723 18 N -0.476 5.476 19 C -0.068 4.068 20 C -0.118 4.118 21 C -0.141 4.141 22 C -0.187 4.187 23 C -0.014 4.014 24 C -0.044 4.044 25 O -0.538 6.538 26 Si 0.781 3.219 27 H 0.100 0.900 28 H 0.102 0.898 29 H 0.115 0.885 30 H 0.415 0.585 31 H 0.110 0.890 32 H 0.085 0.915 33 H 0.153 0.847 34 H 0.142 0.858 35 H 0.141 0.859 36 H 0.152 0.848 37 H 0.065 0.935 38 H 0.108 0.892 39 H 0.181 0.819 40 H 0.146 0.854 41 H 0.388 0.612 42 H -0.294 1.294 43 H -0.285 1.285 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.496 -5.476 -2.494 8.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.054 5.054 3 N -0.101 5.101 4 C -0.198 4.198 5 C 0.392 3.608 6 O -0.441 6.441 7 N -0.341 5.341 8 C 0.005 3.995 9 H 0.112 0.888 10 C -0.161 4.161 11 C -0.089 4.089 12 H 0.129 0.871 13 C -0.038 4.038 14 C -0.137 4.137 15 C -0.087 4.087 16 C -0.058 4.058 17 C -0.037 4.037 18 N -0.152 5.152 19 C -0.089 4.089 20 C -0.136 4.136 21 C -0.180 4.180 22 C -0.215 4.215 23 C -0.139 4.139 24 C -0.154 4.154 25 O -0.345 6.345 26 Si 0.685 3.315 27 H 0.118 0.882 28 H 0.121 0.879 29 H 0.134 0.866 30 H 0.252 0.748 31 H 0.129 0.871 32 H 0.103 0.897 33 H 0.170 0.830 34 H 0.160 0.840 35 H 0.159 0.841 36 H 0.170 0.830 37 H 0.084 0.916 38 H 0.126 0.874 39 H 0.198 0.802 40 H 0.163 0.837 41 H 0.238 0.762 42 H -0.221 1.221 43 H -0.212 1.212 Dipole moment (debyes) X Y Z Total from point charges -5.084 -3.960 -1.987 6.744 hybrid contribution -0.833 -0.091 0.799 1.158 sum -5.917 -4.051 -1.187 7.268 Atomic orbital electron populations 1.22607 0.70775 1.06727 1.06005 1.45684 1.08969 1.01918 1.48815 1.73453 1.02679 1.14673 1.19302 1.21825 0.90918 0.94479 1.12607 1.17003 0.86291 0.82129 0.75377 1.90792 1.23797 1.77726 1.51764 1.45452 1.10702 1.04432 1.73535 1.21992 0.89657 0.89721 0.98151 0.88814 1.23397 1.03619 0.93269 0.95822 1.21681 1.00722 0.89727 0.96793 0.87060 1.20121 0.93365 0.95323 0.94944 1.21192 0.96213 0.96074 1.00253 1.21347 0.99569 0.92258 0.95551 1.16155 0.95216 0.85800 1.08605 1.26187 0.92358 0.92988 0.92195 1.81311 1.09367 1.13308 1.11238 1.21357 0.93443 0.97736 0.96331 1.21244 1.01063 0.91840 0.99444 1.23589 1.01258 0.96153 0.96972 1.21721 0.97404 0.93596 1.08754 1.22157 0.91029 0.92059 1.08655 1.24829 0.93345 0.92136 1.05105 1.86583 1.29306 1.88578 1.30055 0.93239 0.83981 0.74785 0.79531 0.88188 0.87915 0.86642 0.74816 0.87133 0.89680 0.82987 0.84040 0.84125 0.83032 0.91583 0.87422 0.80172 0.83693 0.76207 1.22109 1.21177 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.64 10.13 127.77 1.29 0.66 16 2 N -0.26 0.36 3.70 -355.92 -1.32 -0.96 16 3 N -0.26 -0.56 11.67 -48.18 -0.56 -1.12 16 4 C -0.04 -0.18 7.13 42.46 0.30 0.12 16 5 C 0.61 3.58 7.82 86.75 0.68 4.26 16 6 O -0.56 -6.94 16.52 -3.94 -0.07 -7.01 16 7 N -0.69 0.47 5.26 -443.03 -2.33 -1.86 16 8 C 0.11 -0.36 4.32 45.52 0.20 -0.16 16 9 H 0.09 0.03 7.46 -2.39 -0.02 0.01 16 10 C -0.12 0.99 7.29 31.12 0.23 1.22 16 11 C -0.07 0.59 3.85 -11.01 -0.04 0.54 16 12 H 0.11 -1.09 8.09 -2.39 -0.02 -1.11 16 13 C -0.04 0.25 5.30 -19.80 -0.10 0.14 16 14 C -0.12 0.78 8.60 22.23 0.19 0.97 16 15 C -0.07 0.26 9.76 22.54 0.22 0.48 16 16 C -0.05 0.05 5.73 -21.36 -0.12 -0.08 16 17 C 0.28 1.53 15.33 88.33 1.35 2.89 16 18 N -0.48 -5.72 18.54 19.00 0.35 -5.37 16 19 C -0.07 0.27 9.76 22.54 0.22 0.49 16 20 C -0.12 0.77 9.69 22.23 0.22 0.99 16 21 C -0.14 0.78 7.25 31.12 0.23 1.00 16 22 C -0.19 -0.32 9.35 22.41 0.21 -0.11 16 23 C -0.01 0.02 6.18 41.40 0.26 0.28 16 24 C -0.04 0.25 2.87 71.24 0.20 0.45 16 25 O -0.54 3.06 10.40 -148.98 -1.55 1.51 16 26 Si 0.78 -3.52 31.22 68.60 2.14 -1.38 16 27 H 0.10 -1.10 8.14 -2.38 -0.02 -1.12 16 28 H 0.10 -0.99 8.14 -2.39 -0.02 -1.01 16 29 H 0.12 -1.08 6.77 -2.39 -0.02 -1.10 16 30 H 0.41 -1.67 8.43 -92.71 -0.78 -2.45 16 31 H 0.11 -1.04 7.73 -2.39 -0.02 -1.06 16 32 H 0.08 -0.72 8.14 -2.39 -0.02 -0.74 16 33 H 0.15 -1.54 6.63 -2.91 -0.02 -1.56 16 34 H 0.14 -0.85 8.06 -2.92 -0.02 -0.88 16 35 H 0.14 -0.84 8.06 -2.91 -0.02 -0.87 16 36 H 0.15 -1.59 8.05 -2.91 -0.02 -1.61 16 37 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 38 H 0.11 -0.79 6.28 -2.38 -0.01 -0.80 16 39 H 0.18 -0.25 7.01 -2.91 -0.02 -0.27 16 40 H 0.15 -1.23 7.96 -2.39 -0.02 -1.25 16 41 H 0.39 -3.91 8.70 -74.06 -0.64 -4.55 16 42 H -0.29 -0.59 7.11 99.48 0.71 0.12 16 43 H -0.29 -0.43 7.11 99.48 0.71 0.27 16 Total: 0.00 -24.09 373.66 1.89 -22.20 By element: Atomic # 1 Polarization: -19.85 SS G_CDS: -0.30 Total: -20.16 kcal Atomic # 6 Polarization: 8.62 SS G_CDS: 5.53 Total: 14.15 kcal Atomic # 7 Polarization: -5.46 SS G_CDS: -3.86 Total: -9.32 kcal Atomic # 8 Polarization: -3.88 SS G_CDS: -1.61 Total: -5.50 kcal Atomic # 14 Polarization: -3.52 SS G_CDS: 2.14 Total: -1.38 kcal Total: -24.09 1.89 -22.20 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15505404_13259642.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 124.385 kcal (2) G-P(sol) polarization free energy of solvation -24.089 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 100.295 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.892 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.197 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.188 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds