Wall clock time and date at job start Thu Mar 4 2021 13:14:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.35000 * 126.42335 * 210.02386 * 4 2 1 6 6 N 1.33589 * 108.65404 * 179.97438 * 5 4 2 7 7 C 1.32408 * 109.22044 * 359.97438 * 6 5 4 8 8 C 1.41259 * 132.11526 * 179.97438 * 7 6 5 9 9 Br 1.89097 * 120.25434 * 0.02562 * 8 7 6 10 10 C 1.35711 * 119.48418 * 179.32805 * 8 7 6 11 11 C 1.41760 * 119.53712 * 0.56683 * 10 8 7 12 12 C 1.47573 * 120.01256 * 179.66753 * 11 10 8 13 13 O 1.21592 * 119.99971 * 179.97438 * 12 11 10 14 14 N 1.34780 * 119.99786 * 359.97438 * 12 11 10 15 15 C 1.46498 * 119.99654 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.85321 * 25.33016 * 15 14 12 17 17 C 1.53784 * 113.61155 * 156.53188 * 15 14 12 18 18 C 1.53784 * 87.08078 * 139.97628 * 17 15 14 19 19 H 1.08992 * 113.61197 * 219.93076 * 18 17 15 20 20 N 1.46508 * 113.61301 * 89.11537 * 18 17 15 21 21 C 1.36879 * 126.39522 * 119.71551 * 20 18 17 22 22 C 1.34677 * 106.81364 * 179.83861 * 21 20 18 23 23 N 1.34124 * 108.01989 * 0.42183 * 22 21 20 24 24 C 1.30504 * 109.25815 * 359.73306 * 23 22 21 25 25 C 1.53786 * 113.61238 * 254.13280 * 15 14 12 26 26 C 1.36499 * 119.97623 * 359.65263 * 11 10 8 27 27 N 1.35945 * 120.50985 * 359.96986 * 26 11 10 28 28 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 29 29 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 30 30 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 31 31 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 32 32 H 1.08003 * 125.67614 * 359.96794 * 5 4 2 33 33 H 1.08005 * 120.23086 * 180.22069 * 10 8 7 34 34 H 0.97001 * 119.99754 * 359.97438 * 14 12 11 35 35 H 1.09001 * 113.61169 * 254.52457 * 17 15 14 36 36 H 1.08999 * 113.61751 * 25.34211 * 17 15 14 37 37 H 1.07995 * 126.59210 * 359.97438 * 21 20 18 38 38 H 1.08000 * 125.98959 * 180.18283 * 22 21 20 39 39 H 1.08003 * 125.65111 * 179.97438 * 24 23 22 40 40 H 1.09002 * 113.61260 * 334.57437 * 25 15 14 41 41 H 1.09000 * 113.61140 * 105.47141 * 25 15 14 42 42 H 1.07997 * 119.74486 * 179.97438 * 26 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 3.0851 -0.4608 1.8854 6 7 3.1759 -1.2956 2.9244 7 6 2.1061 -2.0753 2.9520 8 6 1.7115 -3.1118 3.8269 9 35 2.8117 -3.5972 5.2862 10 6 0.5301 -3.7468 3.6202 11 6 -0.2840 -3.3687 2.5230 12 6 -1.5672 -4.0572 2.2842 13 8 -2.2656 -3.7324 1.3433 14 7 -1.9652 -5.0460 3.1091 15 6 -3.2388 -5.7298 2.8717 16 1 -3.5522 -5.6908 1.8285 17 6 -3.3041 -7.1398 3.4822 18 6 -4.7548 -6.8163 3.8769 19 1 -5.0314 -7.1859 4.8642 20 7 -5.7350 -7.1627 2.8446 21 6 -6.7723 -8.0464 2.9734 22 6 -7.4210 -8.0604 1.7933 23 7 -6.7912 -7.2155 0.9636 24 6 -5.7802 -6.6742 1.5864 25 6 -4.3455 -5.3323 3.8627 26 6 0.1194 -2.3674 1.6877 27 7 1.2991 -1.7257 1.8987 28 1 -0.3934 0.4418 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 1.5616 2.4678 -1.2086 31 1 1.5878 2.4586 1.2241 32 1 3.8137 0.2889 1.6144 33 1 0.2149 -4.5385 4.2838 34 1 -1.4079 -5.3053 3.8595 35 1 -3.2198 -7.9388 2.7457 36 1 -2.6388 -7.2778 4.3345 37 1 -7.0237 -8.6202 3.8531 38 1 -8.2930 -8.6516 1.5554 39 1 -5.0934 -5.9549 1.1653 40 1 -3.9664 -4.9747 4.8201 41 1 -5.1007 -4.6742 3.4329 42 1 -0.5036 -2.0826 0.8527 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15608530_12335884.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:14:12 Heat of formation + Delta-G solvation = 141.955735 kcal Electronic energy + Delta-G solvation = -30631.771873 eV Core-core repulsion = 26243.082756 eV Total energy + Delta-G solvation = -4388.689117 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.043 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -44.28029 -43.26691 -41.39683 -39.66914 -38.49681 -38.08331 -35.57661 -35.00654 -33.11413 -32.30250 -31.76860 -30.29134 -30.25757 -27.03724 -26.94253 -26.78861 -25.08574 -24.09945 -22.70003 -22.49380 -22.33628 -21.75862 -21.02192 -19.59190 -18.84816 -18.29000 -18.05620 -17.75223 -17.54630 -17.23149 -16.50181 -16.30479 -16.14313 -16.09428 -15.89927 -15.70345 -15.37640 -15.33963 -14.94361 -14.81670 -14.68398 -14.12769 -13.97618 -13.72886 -13.55152 -13.45569 -13.37102 -13.08635 -13.04592 -12.78264 -12.22786 -12.17093 -11.87048 -11.57349 -11.39973 -11.39570 -11.27902 -11.08338 -10.96212 -10.57980 -10.33854 -10.03557 -9.49900 -9.10323 -4.95663 -0.93522 -0.39832 0.17993 0.94247 1.04770 1.10536 1.38113 1.65671 1.76095 1.78493 1.87349 1.99109 2.16905 2.18679 2.80328 2.96657 3.07239 3.13030 3.32542 3.34660 3.42237 3.45585 3.60515 3.66179 3.84054 3.84584 4.01328 4.11910 4.26990 4.28895 4.35282 4.39298 4.42873 4.47351 4.58567 4.60013 4.74698 4.75518 4.85451 4.91122 4.96023 5.26900 5.30927 5.32088 5.54575 5.79434 6.16138 6.22854 6.25466 6.48101 6.91792 7.10276 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.054 4.054 3 Si 0.817 3.183 4 C -0.090 4.090 5 C 0.046 3.954 6 N -0.492 5.492 7 C 0.224 3.776 8 C -0.080 4.080 9 Br 0.008 6.992 10 C -0.024 4.024 11 C -0.168 4.168 12 C 0.579 3.421 13 O -0.566 6.566 14 N -0.692 5.692 15 C 0.109 3.891 16 H 0.097 0.903 17 C -0.136 4.136 18 C 0.105 3.895 19 H 0.151 0.849 20 N -0.440 5.440 21 C -0.037 4.037 22 C -0.066 4.066 23 N -0.541 5.541 24 C 0.167 3.833 25 C -0.150 4.150 26 C 0.155 3.845 27 N -0.359 5.359 28 H 0.386 0.614 29 H 0.138 0.862 30 H -0.291 1.291 31 H -0.289 1.289 32 H 0.228 0.772 33 H 0.190 0.810 34 H 0.420 0.580 35 H 0.077 0.923 36 H 0.145 0.855 37 H 0.210 0.790 38 H 0.177 0.823 39 H 0.207 0.793 40 H 0.134 0.866 41 H 0.066 0.934 42 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.394 -1.711 6.835 7.821 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.161 4.161 3 Si 0.718 3.282 4 C -0.201 4.201 5 C -0.104 4.104 6 N -0.211 5.211 7 C -0.021 4.021 8 C -0.162 4.162 9 Br 0.093 6.907 10 C -0.050 4.050 11 C -0.176 4.176 12 C 0.365 3.635 13 O -0.445 6.445 14 N -0.344 5.344 15 C 0.004 3.996 16 H 0.115 0.885 17 C -0.174 4.174 18 C 0.002 3.998 19 H 0.169 0.831 20 N -0.123 5.123 21 C -0.170 4.170 22 C -0.213 4.213 23 N -0.260 5.260 24 C -0.115 4.115 25 C -0.189 4.189 26 C 0.028 3.972 27 N -0.033 5.033 28 H 0.235 0.765 29 H 0.155 0.845 30 H -0.218 1.218 31 H -0.216 1.216 32 H 0.244 0.756 33 H 0.207 0.793 34 H 0.260 0.740 35 H 0.095 0.905 36 H 0.162 0.838 37 H 0.227 0.773 38 H 0.194 0.806 39 H 0.223 0.777 40 H 0.152 0.848 41 H 0.085 0.915 42 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 3.747 -0.933 5.985 7.122 hybrid contribution -1.683 -0.226 0.277 1.720 sum 2.065 -1.159 6.261 6.694 Atomic orbital electron populations 1.86597 1.18387 1.80103 1.50387 1.25209 0.83327 1.12361 0.95221 0.93457 0.89301 0.68674 0.76753 1.22396 0.98346 0.96803 1.02539 1.23028 0.96470 0.99955 0.90916 1.70847 1.19949 1.08079 1.22273 1.20772 0.89899 0.99898 0.91572 1.20610 0.98400 0.99299 0.97925 1.96849 1.66792 1.90489 1.36560 1.21371 0.89988 0.98117 0.95487 1.19244 0.98207 1.00983 0.99167 1.17623 0.83939 0.79936 0.81971 1.90866 1.56195 1.65838 1.31644 1.45606 1.22584 1.35231 1.30946 1.22894 0.83289 0.93174 1.00252 0.88476 1.23821 0.95080 0.95336 1.03186 1.22464 0.87949 0.97710 0.91719 0.83121 1.45487 1.23205 1.32130 1.11448 1.23251 0.91965 0.99346 1.02476 1.22724 1.03742 1.03097 0.91704 1.70268 1.08697 1.12865 1.34169 1.25163 1.00063 1.03204 0.83077 1.23964 0.97838 0.94783 1.02267 1.22222 0.85193 0.90705 0.99046 1.42738 1.14797 1.24402 1.21330 0.76462 0.84465 1.21758 1.21565 0.75558 0.79300 0.74025 0.90475 0.83755 0.77317 0.80571 0.77687 0.84760 0.91549 0.79525 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.03 10.88 -148.98 -1.62 -1.60 16 2 C -0.05 0.17 3.06 71.24 0.22 0.39 16 3 Si 0.82 -4.52 31.18 68.60 2.14 -2.38 16 4 C -0.09 0.00 6.25 41.01 0.26 0.25 16 5 C 0.05 0.00 10.44 83.68 0.87 0.87 16 6 N -0.49 -3.02 11.30 -194.10 -2.19 -5.21 16 7 C 0.22 1.05 7.59 134.19 1.02 2.07 16 8 C -0.08 -0.05 6.24 22.43 0.14 0.09 16 9 Br 0.01 0.00 33.72 -20.37 -0.69 -0.68 16 10 C -0.02 0.12 9.26 22.55 0.21 0.33 16 11 C -0.17 0.31 5.84 -20.35 -0.12 0.19 16 12 C 0.58 -0.47 7.76 86.71 0.67 0.20 16 13 O -0.57 -4.38 15.89 -4.01 -0.06 -4.44 16 14 N -0.69 5.83 5.31 -443.14 -2.35 3.47 16 15 C 0.11 -0.79 3.71 45.52 0.17 -0.62 16 16 H 0.10 -0.14 5.00 -2.39 -0.01 -0.15 16 17 C -0.14 1.63 7.54 31.12 0.23 1.86 16 18 C 0.10 -1.03 4.88 45.57 0.22 -0.81 16 19 H 0.15 -2.27 8.14 -2.39 -0.02 -2.29 16 20 N -0.44 0.63 2.94 -503.49 -1.48 -0.85 16 21 C -0.04 0.02 11.58 83.09 0.96 0.98 16 22 C -0.07 -0.40 11.87 83.53 0.99 0.59 16 23 N -0.54 -6.21 11.25 -200.30 -2.25 -8.47 16 24 C 0.17 0.86 11.19 180.26 2.02 2.88 16 25 C -0.15 1.38 7.31 31.18 0.23 1.61 16 26 C 0.15 0.20 9.91 83.65 0.83 1.03 16 27 N -0.36 -0.93 2.93 -337.71 -0.99 -1.92 16 28 H 0.39 -1.68 8.70 -74.06 -0.64 -2.33 16 29 H 0.14 -0.73 7.96 -2.39 -0.02 -0.75 16 30 H -0.29 -0.46 7.11 99.48 0.71 0.25 16 31 H -0.29 -0.07 7.11 99.48 0.71 0.64 16 32 H 0.23 -1.93 6.90 -2.91 -0.02 -1.95 16 33 H 0.19 -2.55 6.44 -2.91 -0.02 -2.56 16 34 H 0.42 -6.48 6.74 -92.71 -0.63 -7.11 16 35 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 36 H 0.14 -2.67 8.11 -2.39 -0.02 -2.69 16 37 H 0.21 -1.76 8.06 -2.91 -0.02 -1.79 16 38 H 0.18 0.47 8.06 -2.91 -0.02 0.45 16 39 H 0.21 0.58 5.86 -2.91 -0.02 0.57 16 40 H 0.13 -1.88 8.14 -2.39 -0.02 -1.90 16 41 H 0.07 -0.26 8.02 -2.39 -0.02 -0.28 16 42 H 0.19 0.43 6.18 -2.91 -0.02 0.41 16 Total: 0.00 -31.63 374.50 -0.69 -32.32 By element: Atomic # 1 Polarization: -22.04 SS G_CDS: -0.10 Total: -22.14 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: 8.92 Total: 11.91 kcal Atomic # 7 Polarization: -3.70 SS G_CDS: -9.28 Total: -12.98 kcal Atomic # 8 Polarization: -4.36 SS G_CDS: -1.69 Total: -6.04 kcal Atomic # 14 Polarization: -4.52 SS G_CDS: 2.14 Total: -2.38 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.68 kcal Total: -31.63 -0.69 -32.32 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15608530_12335884.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 174.272 kcal (2) G-P(sol) polarization free energy of solvation -31.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 142.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.691 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.316 kcal (6) G-S(sol) free energy of system = (1) + (5) 141.956 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds