Wall clock time and date at job start Thu Mar 4 2021 13:32:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.30824 * 125.96297 * 2 1 4 4 C 1.33242 * 109.83318 * 180.02562 * 3 2 1 5 5 C 1.50697 * 125.52783 * 179.97438 * 4 3 2 6 6 H 1.08996 * 109.47163 * 0.02562 * 5 4 3 7 7 C 1.53002 * 109.46856 * 120.00718 * 5 4 3 8 8 C 1.53005 * 109.47153 * 180.02562 * 7 5 4 9 9 C 1.53003 * 109.46825 * 299.99769 * 8 7 5 10 10 H 1.08996 * 109.47069 * 299.99837 * 9 8 7 11 11 N 1.46499 * 109.47006 * 180.02562 * 9 8 7 12 12 C 1.34774 * 120.00130 * 85.00266 * 11 9 8 13 13 O 1.21576 * 119.99965 * 359.97438 * 12 11 9 14 14 C 1.47717 * 120.00224 * 180.02562 * 12 11 9 15 15 N 1.31804 * 126.51473 * 0.02562 * 14 12 11 16 16 N 1.28465 * 110.07228 * 180.02562 * 15 14 12 17 17 C 1.46501 * 124.88481 * 179.97438 * 16 15 14 18 18 C 1.35035 * 110.22976 * 0.02562 * 16 15 14 19 19 C 1.50701 * 126.38459 * 180.02562 * 18 16 15 20 20 O 1.42896 * 109.47417 * 29.99950 * 19 18 16 21 21 Si 1.86301 * 109.47149 * 149.99967 * 19 18 16 22 22 C 1.35365 * 107.22822 * 0.26093 * 18 16 15 23 23 C 1.53002 * 109.47067 * 60.00178 * 9 8 7 24 24 C 1.53003 * 109.47123 * 240.00488 * 5 4 3 25 25 N 1.30711 * 108.94389 * 0.26834 * 4 3 2 26 26 N 1.34427 * 125.95897 * 180.02562 * 2 1 3 27 27 H 1.09006 * 109.47022 * 90.00291 * 1 2 3 28 28 H 1.09002 * 109.46892 * 209.99457 * 1 2 3 29 29 H 1.08991 * 109.47273 * 330.00203 * 1 2 3 30 30 H 1.09006 * 109.47237 * 299.99789 * 7 5 4 31 31 H 1.08996 * 109.47455 * 59.99909 * 7 5 4 32 32 H 1.08994 * 109.47285 * 179.97438 * 8 7 5 33 33 H 1.08996 * 109.47164 * 59.99547 * 8 7 5 34 34 H 0.97001 * 119.99917 * 264.99603 * 11 9 8 35 35 H 1.08998 * 109.47073 * 270.02122 * 17 16 15 36 36 H 1.09002 * 109.47365 * 30.02823 * 17 16 15 37 37 H 1.09004 * 109.46889 * 150.01966 * 17 16 15 38 38 H 1.09002 * 109.47060 * 269.99977 * 19 18 16 39 39 H 0.96699 * 114.00604 * 179.97438 * 20 19 18 40 40 H 1.48501 * 110.00188 * 178.68010 * 21 19 18 41 41 H 1.48498 * 110.00005 * 299.99971 * 21 19 18 42 42 H 1.08000 * 127.24686 * 179.73876 * 22 18 16 43 43 H 1.08996 * 109.47455 * 59.99895 * 23 9 8 44 44 H 1.09004 * 109.46723 * 180.02562 * 23 9 8 45 45 H 1.08994 * 109.47053 * 60.00205 * 24 5 4 46 46 H 1.08996 * 109.47069 * 300.00017 * 24 5 4 47 47 H 0.96998 * 126.82966 * 359.97438 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0589 0.0000 4 6 3.5553 0.6887 -0.0006 5 6 4.7372 1.6236 -0.0013 6 1 4.3847 2.6550 -0.0008 7 6 5.5853 1.3743 1.2475 8 6 6.7850 2.3239 1.2472 9 6 7.6320 2.0750 -0.0025 10 1 7.9849 1.0438 -0.0028 11 7 8.7810 2.9838 -0.0026 12 6 9.9030 2.6516 0.6663 13 8 9.9613 1.5980 1.2701 14 6 11.0614 3.5682 0.6667 15 7 11.1376 4.7361 0.0604 16 7 12.2890 5.2665 0.2685 17 6 12.7206 6.5646 -0.2559 18 6 13.0446 4.4549 1.0392 19 6 14.4533 4.7205 1.5041 20 8 14.6520 6.1289 1.6417 21 14 14.7313 3.8905 3.1487 22 6 12.3027 3.3561 1.3119 23 6 6.7839 2.3243 -1.2513 24 6 5.5840 1.3741 -1.2510 25 7 3.6194 -0.6168 -0.0067 26 7 2.2964 -1.0881 -0.0005 27 1 -0.3633 -0.0001 -1.0277 28 1 -0.3633 -0.8901 0.5138 29 1 -0.3633 0.8899 0.5138 30 1 4.9821 1.5520 2.1379 31 1 5.9378 0.3429 1.2474 32 1 7.3890 2.1466 2.1370 33 1 6.4321 3.3551 1.2475 34 1 8.7344 3.8246 -0.4841 35 1 13.1923 6.4249 -1.2286 36 1 11.8557 7.2194 -0.3621 37 1 13.4350 7.0153 0.4330 38 1 15.1580 4.3239 0.7732 39 1 15.5390 6.3738 1.9389 40 1 16.1267 4.1182 3.6031 41 1 13.7766 4.4226 4.1540 42 1 12.5955 2.4991 1.9003 43 1 6.4310 3.3556 -1.2510 44 1 7.3872 2.1466 -2.1416 45 1 4.9798 1.5517 -2.1406 46 1 5.9365 0.3428 -1.2511 47 1 2.0094 -2.0146 -0.0006 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15608548_13259642.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:32:25 Heat of formation + Delta-G solvation = 87.752311 kcal Electronic energy + Delta-G solvation = -29829.250829 eV Core-core repulsion = 25630.668932 eV Total energy + Delta-G solvation = -4198.581898 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.174 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.80306 -43.21830 -40.93815 -39.16659 -38.08874 -35.75964 -34.44028 -33.71492 -33.36867 -32.74270 -31.85961 -30.71346 -28.80781 -28.31622 -26.74373 -25.18118 -23.82783 -23.69373 -22.30517 -22.09454 -21.44690 -20.99460 -20.33790 -18.90132 -18.69322 -18.45974 -17.52364 -17.36582 -17.28362 -16.73478 -16.29023 -16.10596 -15.82967 -15.45039 -15.25440 -15.12618 -14.90488 -14.79445 -14.70155 -14.15090 -13.99923 -13.96299 -13.66764 -13.60305 -13.44374 -13.35795 -13.23670 -12.86527 -12.83601 -12.41792 -12.32046 -12.27968 -12.15782 -11.84188 -11.64234 -11.46837 -11.23314 -11.08627 -11.02780 -10.98633 -10.45407 -10.27059 -9.98616 -9.86044 -4.88242 0.45951 0.56538 0.81703 1.27594 1.54901 1.66008 1.70984 1.79679 1.98332 2.10574 2.32606 2.92879 2.95646 3.29025 3.51094 3.53487 3.66537 3.71352 3.81329 4.05870 4.08536 4.19893 4.21492 4.31001 4.36902 4.38464 4.38719 4.40438 4.46409 4.51784 4.63089 4.66206 4.67236 4.68654 4.81809 4.85062 5.01967 5.02890 5.03856 5.09426 5.13393 5.23924 5.26027 5.28914 5.34775 5.40258 5.51093 5.70204 6.17435 6.41080 6.50971 6.84810 7.06944 7.14771 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.285 3.715 3 N -0.574 5.574 4 C 0.226 3.774 5 C 0.008 3.992 6 H 0.105 0.895 7 C -0.096 4.096 8 C -0.120 4.120 9 C 0.147 3.853 10 H 0.074 0.926 11 N -0.703 5.703 12 C 0.605 3.395 13 O -0.564 6.564 14 C -0.039 4.039 15 N -0.267 5.267 16 N -0.265 5.265 17 C 0.071 3.929 18 C 0.024 3.976 19 C -0.046 4.046 20 O -0.553 6.553 21 Si 0.774 3.226 22 C -0.192 4.192 23 C -0.114 4.114 24 C -0.097 4.097 25 N -0.340 5.340 26 N -0.479 5.479 27 H 0.108 0.892 28 H 0.109 0.891 29 H 0.099 0.901 30 H 0.063 0.937 31 H 0.060 0.940 32 H 0.055 0.945 33 H 0.081 0.919 34 H 0.415 0.585 35 H 0.097 0.903 36 H 0.098 0.902 37 H 0.127 0.873 38 H 0.117 0.883 39 H 0.406 0.594 40 H -0.264 1.264 41 H -0.312 1.312 42 H 0.183 0.817 43 H 0.090 0.910 44 H 0.083 0.917 45 H 0.074 0.926 46 H 0.063 0.937 47 H 0.454 0.546 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.557 1.854 -3.070 3.629 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C 0.007 3.993 3 N -0.305 5.305 4 C -0.057 4.057 5 C -0.012 4.012 6 H 0.124 0.876 7 C -0.135 4.135 8 C -0.158 4.158 9 C 0.043 3.957 10 H 0.092 0.908 11 N -0.353 5.353 12 C 0.390 3.610 13 O -0.441 6.441 14 C -0.197 4.197 15 N -0.105 5.105 16 N -0.054 5.054 17 C -0.068 4.068 18 C -0.101 4.101 19 C -0.155 4.155 20 O -0.365 6.365 21 Si 0.677 3.323 22 C -0.220 4.220 23 C -0.151 4.151 24 C -0.136 4.136 25 N -0.169 5.169 26 N -0.199 5.199 27 H 0.126 0.874 28 H 0.128 0.872 29 H 0.118 0.882 30 H 0.082 0.918 31 H 0.079 0.921 32 H 0.073 0.927 33 H 0.099 0.901 34 H 0.252 0.748 35 H 0.116 0.884 36 H 0.117 0.883 37 H 0.145 0.855 38 H 0.135 0.865 39 H 0.259 0.741 40 H -0.189 1.189 41 H -0.239 1.239 42 H 0.200 0.800 43 H 0.109 0.891 44 H 0.102 0.898 45 H 0.093 0.907 46 H 0.082 0.918 47 H 0.302 0.698 Dipole moment (debyes) X Y Z Total from point charges 0.191 2.043 -2.747 3.429 hybrid contribution 0.512 0.154 0.283 0.605 sum 0.703 2.197 -2.464 3.375 Atomic orbital electron populations 1.20634 0.80480 1.06438 1.05990 1.25201 0.98181 0.82246 0.93680 1.70391 1.01827 1.31095 1.27174 1.24510 0.93644 0.90355 0.97167 1.19675 0.88144 0.96701 0.96727 0.87639 1.21390 0.95621 0.99909 0.96595 1.21829 0.95772 1.00494 0.97744 1.21049 0.84836 0.93955 0.95905 0.90814 1.45836 1.13164 1.24027 1.52315 1.17013 0.81464 0.84102 0.78383 1.90786 1.82962 1.25124 1.45249 1.21816 0.97258 0.94920 1.05729 1.73440 1.05371 1.09810 1.21905 1.45683 1.07938 1.17238 1.34494 1.22786 1.03128 0.78657 1.02182 1.21173 0.96074 0.92898 0.99984 1.24430 0.91615 0.87324 1.12165 1.86337 1.40049 1.20196 1.89924 0.93356 0.77187 0.89753 0.71995 1.21637 0.92472 1.01074 1.06807 1.21734 0.95645 1.01220 0.96549 1.21424 0.95676 1.00102 0.96402 1.77921 0.98273 1.12747 1.27966 1.48000 1.03588 1.10994 1.57328 0.87395 0.87225 0.88198 0.91828 0.92132 0.92652 0.90071 0.74839 0.88449 0.88328 0.85480 0.86523 0.74056 1.18945 1.23949 0.79998 0.89136 0.89825 0.90728 0.91843 0.69790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.55 10.51 71.24 0.75 1.29 16 2 C 0.28 0.74 8.24 138.23 1.14 1.88 16 3 N -0.57 -5.05 11.19 -179.74 -2.01 -7.07 16 4 C 0.23 1.96 6.65 138.63 0.92 2.88 16 5 C 0.01 0.04 2.66 -11.54 -0.03 0.00 16 6 H 0.11 0.29 8.14 -2.39 -0.02 0.27 16 7 C -0.10 -0.46 5.19 30.60 0.16 -0.31 16 8 C -0.12 -0.48 5.50 30.60 0.17 -0.32 16 9 C 0.15 0.54 2.45 44.99 0.11 0.65 16 10 H 0.07 0.60 7.57 -2.39 -0.02 0.58 16 11 N -0.70 -3.32 5.07 -445.52 -2.26 -5.58 16 12 C 0.61 6.48 7.79 86.75 0.68 7.16 16 13 O -0.56 -9.50 16.59 -3.95 -0.07 -9.56 16 14 C -0.04 -0.36 7.13 42.46 0.30 -0.06 16 15 N -0.27 -1.95 11.67 -48.18 -0.56 -2.51 16 16 N -0.26 -1.07 3.70 -355.92 -1.32 -2.39 16 17 C 0.07 -0.22 11.00 127.77 1.41 1.19 16 18 C 0.02 0.07 6.21 41.40 0.26 0.33 16 19 C -0.05 0.18 2.98 71.24 0.21 0.40 16 20 O -0.55 2.85 9.77 -148.98 -1.46 1.39 16 21 Si 0.77 -2.30 31.24 68.60 2.14 -0.16 16 22 C -0.19 -1.17 9.35 22.41 0.21 -0.96 16 23 C -0.11 0.11 5.39 30.61 0.17 0.28 16 24 C -0.10 -0.17 5.19 30.61 0.16 -0.01 16 25 N -0.34 -3.10 12.80 -51.34 -0.66 -3.76 16 26 N -0.48 -1.22 7.45 -50.71 -0.38 -1.60 16 27 H 0.11 -1.03 8.14 -2.38 -0.02 -1.05 16 28 H 0.11 -1.33 8.14 -2.39 -0.02 -1.35 16 29 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 30 H 0.06 0.36 8.14 -2.38 -0.02 0.34 16 31 H 0.06 0.47 8.14 -2.39 -0.02 0.45 16 32 H 0.05 0.46 8.14 -2.39 -0.02 0.44 16 33 H 0.08 0.13 8.14 -2.39 -0.02 0.11 16 34 H 0.41 0.46 8.33 -92.71 -0.77 -0.31 16 35 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 36 H 0.10 -0.44 8.14 -2.39 -0.02 -0.46 16 37 H 0.13 -0.55 5.19 -2.38 -0.01 -0.57 16 38 H 0.12 -1.07 7.96 -2.39 -0.02 -1.09 16 39 H 0.41 -5.44 8.74 -74.06 -0.65 -6.09 16 40 H -0.26 0.33 7.11 99.48 0.71 1.04 16 41 H -0.31 -2.29 7.11 99.48 0.71 -1.58 16 42 H 0.18 0.43 7.04 -2.91 -0.02 0.41 16 43 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 44 H 0.08 -0.17 8.14 -2.38 -0.02 -0.19 16 45 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 46 H 0.06 0.28 8.14 -2.39 -0.02 0.26 16 47 H 0.45 -2.11 8.96 -213.09 -1.91 -4.02 16 Total: 0.00 -29.00 387.70 -2.22 -31.21 By element: Atomic # 1 Polarization: -12.14 SS G_CDS: -2.26 Total: -14.40 kcal Atomic # 6 Polarization: 7.81 SS G_CDS: 6.60 Total: 14.41 kcal Atomic # 7 Polarization: -15.72 SS G_CDS: -7.18 Total: -22.90 kcal Atomic # 8 Polarization: -6.65 SS G_CDS: -1.52 Total: -8.17 kcal Atomic # 14 Polarization: -2.30 SS G_CDS: 2.14 Total: -0.16 kcal Total: -29.00 -2.22 -31.21 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15608548_13259642.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.965 kcal (2) G-P(sol) polarization free energy of solvation -28.996 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.969 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.217 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.213 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.752 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds